RNA–Protein interactions for RNA: ENST00000563589.1

POLR2C-205, Transcript of RNA polymerase II subunit C, humanhuman

TSL 4

Gene POLR2C, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-205ENST00000563589 NISCHQ9Y2I1 1504 aa19.4■□□□□ 0.7
POLR2C-205ENST00000563589 CCDC180Q9P1Z9 1646 aa17.55■□□□□ 0.4
POLR2C-205ENST00000563589 ABCC9O60706 1549 aa17.47■□□□□ 0.39
POLR2C-205ENST00000563589 AEBP2Q6ZN18 517 aaPredicted RBP16.94■□□□□ 0.3
POLR2C-205ENST00000563589 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
POLR2C-205ENST00000563589 NACADO15069 1562 aa16.53■□□□□ 0.24
POLR2C-205ENST00000563589 UNC13AQ9UPW8 1703 aa16.34■□□□□ 0.21
POLR2C-205ENST00000563589 MYO15BQ96JP2 1530 aa16.27■□□□□ 0.2
POLR2C-205ENST00000563589 DCAF8L2P0C7V8 631 aa16.26■□□□□ 0.19
POLR2C-205ENST00000563589 DNAJC5BQ9UF47 199 aa16.26■□□□□ 0.19
POLR2C-205ENST00000563589 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
POLR2C-205ENST00000563589 BICRAQ9NZM4 1560 aa16.15■□□□□ 0.18
POLR2C-205ENST00000563589 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
POLR2C-205ENST00000563589 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
POLR2C-205ENST00000563589 DCAF1Q9Y4B6 1507 aa16.05■□□□□ 0.16
POLR2C-205ENST00000563589 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
POLR2C-205ENST00000563589 SCRIBQ14160 1630 aa15.94■□□□□ 0.14
POLR2C-205ENST00000563589 CC2D2AQ9P2K1 1620 aa15.82■□□□□ 0.12
POLR2C-205ENST00000563589 EIF4G1Q04637 1599 aaKnown RBP15.78■□□□□ 0.12
POLR2C-205ENST00000563589 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
POLR2C-205ENST00000563589 DNAJC5Q9H3Z4 198 aa15.42■□□□□ 0.06
POLR2C-205ENST00000563589 SMARCA4P51532 1647 aa15.2■□□□□ 0.02
POLR2C-205ENST00000563589 NCAPD3P42695 1498 aa15.19■□□□□ 0.02
POLR2C-205ENST00000563589 SMARCA2P51531 1590 aa15.18■□□□□ 0.02
POLR2C-205ENST00000563589 HMGXB3Q12766 1538 aa15.17■□□□□ 0.02
POLR2C-205ENST00000563589 ATAD2BQ9ULI0 1458 aa15.14■□□□□ 0.01
POLR2C-205ENST00000563589 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
POLR2C-205ENST00000563589 CUX2O14529 1486 aa15.13■□□□□ 0.01
POLR2C-205ENST00000563589 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
POLR2C-205ENST00000563589 BAZ1BQ9UIG0 1483 aaKnown RBP15.05■□□□□ -0
POLR2C-205ENST00000563589 PEG3Q9GZU2 1588 aa15.03■□□□□ -0
POLR2C-205ENST00000563589 NESP48681 1621 aa14.98□□□□□ -0.01
POLR2C-205ENST00000563589 LAMC3Q9Y6N6 1575 aa14.95□□□□□ -0.02
POLR2C-205ENST00000563589 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
POLR2C-205ENST00000563589 MROH2BQ7Z745 1585 aa14.93□□□□□ -0.02
POLR2C-205ENST00000563589 KIF21AQ7Z4S6 1674 aa14.89□□□□□ -0.03
POLR2C-205ENST00000563589 PDS5BQ9NTI5 1447 aa14.8□□□□□ -0.04
POLR2C-205ENST00000563589 WIZO95785 1651 aa14.79□□□□□ -0.04
POLR2C-205ENST00000563589 MRC2Q9UBG0 1479 aa14.71□□□□□ -0.05
POLR2C-205ENST00000563589 CADPSQ9ULU8 1353 aa14.71□□□□□ -0.06
POLR2C-205ENST00000563589 WDR62O43379 1518 aa14.69□□□□□ -0.06
POLR2C-205ENST00000563589 CEP164Q9UPV0 1460 aa14.66□□□□□ -0.06
POLR2C-205ENST00000563589 TOP2AP11388 1531 aaKnown RBP14.63□□□□□ -0.07
POLR2C-205ENST00000563589 FANCD2Q9BXW9 1451 aa14.6□□□□□ -0.07
POLR2C-205ENST00000563589 PRDM2Q13029 1718 aa14.59□□□□□ -0.07
POLR2C-205ENST00000563589 CFTRP13569 1480 aa14.57□□□□□ -0.08
POLR2C-205ENST00000563589 RSF1Q96T23 1441 aaPredicted RBP14.56□□□□□ -0.08
POLR2C-205ENST00000563589 URB2Q14146 1524 aaKnown RBP14.47□□□□□ -0.09
POLR2C-205ENST00000563589 SENP3Q9H4L4 574 aaPredicted RBP14.46□□□□□ -0.09
POLR2C-205ENST00000563589 TRIM41Q8WV44 630 aa14.38□□□□□ -0.11
POLR2C-205ENST00000563589 CCDC88BA6NC98 1476 aa14.37□□□□□ -0.11
POLR2C-205ENST00000563589 IFT140Q96RY7 1462 aa14.34□□□□□ -0.11
POLR2C-205ENST00000563589 TOPBP1Q92547 1522 aa14.32□□□□□ -0.12
POLR2C-205ENST00000563589 EIF4G3O43432 1585 aaKnown RBP14.31□□□□□ -0.12
POLR2C-205ENST00000563589 DNMBPQ6XZF7 1577 aa14.31□□□□□ -0.12
POLR2C-205ENST00000563589 OSCARQ8IYS5 282 aa14.29□□□□□ -0.12
POLR2C-205ENST00000563589 ABCC8Q09428 1581 aa14.29□□□□□ -0.12
POLR2C-205ENST00000563589 ZNF608Q9ULD9 1512 aaPredicted RBP14.28□□□□□ -0.12
POLR2C-205ENST00000563589 RIMBP3CA6NJZ7 1639 aa14.26□□□□□ -0.13
POLR2C-205ENST00000563589 RIMBP3BA6NNM3 1639 aa14.26□□□□□ -0.13
POLR2C-205ENST00000563589 RIMBP3Q9UFD9 1639 aa14.26□□□□□ -0.13
POLR2C-205ENST00000563589 PHF23Q9BUL5 403 aaPredicted RBP14.25□□□□□ -0.13
POLR2C-205ENST00000563589 TARBP1Q13395 1621 aaKnown RBP14.23□□□□□ -0.13
POLR2C-205ENST00000563589 CHD1O14646 1710 aa14.22□□□□□ -0.13
POLR2C-205ENST00000563589 ARHGEF11O15085 1522 aa14.19□□□□□ -0.14
POLR2C-205ENST00000563589 POLA1P09884 1462 aaPredicted RBP14.17□□□□□ -0.14
POLR2C-205ENST00000563589 WDR97A6NE52 1622 aa14.15□□□□□ -0.14
POLR2C-205ENST00000563589 AQRO60306 1485 aaKnown RBP eCLIP14.12□□□□□ -0.152e-6■■□□□ 11.9
POLR2C-205ENST00000563589 FGD5Q6ZNL6 1462 aa14.08□□□□□ -0.16
POLR2C-205ENST00000563589 RAD54L2Q9Y4B4 1467 aa14.07□□□□□ -0.16
POLR2C-205ENST00000563589 SNAPC4Q5SXM2 1469 aa14.06□□□□□ -0.16
POLR2C-205ENST00000563589 SOGA1O94964 1423 aa14.05□□□□□ -0.16
POLR2C-205ENST00000563589 CUX1P39880 1505 aa14.05□□□□□ -0.16
POLR2C-205ENST00000563589 PBRM1Q86U86 1689 aa14.04□□□□□ -0.16
POLR2C-205ENST00000563589 ARAP1Q96P48 1450 aa14.03□□□□□ -0.16
POLR2C-205ENST00000563589 SYNJ1O43426 1573 aa14.03□□□□□ -0.16
POLR2C-205ENST00000563589 MAGI1Q96QZ7 1491 aaPredicted RBP14.02□□□□□ -0.16
POLR2C-205ENST00000563589 CLASP1Q7Z460 1538 aa14.01□□□□□ -0.17
POLR2C-205ENST00000563589 FBLN2P98095 1184 aa14.01□□□□□ -0.17
POLR2C-205ENST00000563589 TDRD9Q8NDG6 1382 aaKnown RBP14□□□□□ -0.17
POLR2C-205ENST00000563589 GRIN2BQ13224 1484 aa13.99□□□□□ -0.17
POLR2C-205ENST00000563589 ABCA5Q8WWZ7 1642 aa13.96□□□□□ -0.17
POLR2C-205ENST00000563589 SYNJ2O15056 1496 aa13.95□□□□□ -0.18
POLR2C-205ENST00000563589 CYB5RLQ6IPT4 315 aa13.95□□□□□ -0.18
POLR2C-205ENST00000563589 GAPVD1Q14C86 1478 aa13.92□□□□□ -0.18
POLR2C-205ENST00000563589 ABCA10Q8WWZ4 1543 aa13.91□□□□□ -0.18
POLR2C-205ENST00000563589 CHMP7Q8WUX9 453 aaPredicted RBP13.91□□□□□ -0.18
POLR2C-205ENST00000563589 BIVM-ERCC5R4GMW8 1640 aa13.89□□□□□ -0.19
POLR2C-205ENST00000563589 ADAMTS12P58397 1594 aa13.87□□□□□ -0.19
POLR2C-205ENST00000563589 TOP2BQ02880 1626 aa13.86□□□□□ -0.19
POLR2C-205ENST00000563589 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
POLR2C-205ENST00000563589 SUPT5HO00267 1087 aaKnown RBP13.83□□□□□ -0.2
POLR2C-205ENST00000563589 WRNQ14191 1432 aaPredicted RBP eCLIP13.82□□□□□ -0.2
POLR2C-205ENST00000563589 GRIN2AQ12879 1464 aa13.81□□□□□ -0.2
POLR2C-205ENST00000563589 CEP170Q5SW79 1584 aa13.79□□□□□ -0.2
POLR2C-205ENST00000563589 SHROOM2Q13796 1616 aa13.76□□□□□ -0.21
POLR2C-205ENST00000563589 ERICH3Q5RHP9 1530 aa13.76□□□□□ -0.21
POLR2C-205ENST00000563589 NUP160Q12769 1436 aa13.75□□□□□ -0.21
POLR2C-205ENST00000563589 ERCC6L2Q5T890 1561 aa13.75□□□□□ -0.21
POLR2C-205ENST00000563589 FHAD1B1AJZ9 1412 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms