RNA–Protein interactions for RNA: ENST00000562448.1

PMM2-204, Transcript of phosphomannomutase 2, humanhuman

TSL 2

Gene PMM2, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM2-204ENST00000562448 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.81
PMM2-204ENST00000562448 ABCC9O60706 1549 aa23.88■■□□□ 1.41
PMM2-204ENST00000562448 CCDC180Q9P1Z9 1646 aa23.7■■□□□ 1.38
PMM2-204ENST00000562448 RB1CC1Q8TDY2 1594 aa22.61■■□□□ 1.21
PMM2-204ENST00000562448 DNAJC5BQ9UF47 199 aa22.59■■□□□ 1.21
PMM2-204ENST00000562448 NACADO15069 1562 aa22.42■■□□□ 1.18
PMM2-204ENST00000562448 DCAF8L2P0C7V8 631 aa22.35■■□□□ 1.17
PMM2-204ENST00000562448 PABPN1Q86U42 306 aaKnown RBP eCLIP22.24■■□□□ 1.15
PMM2-204ENST00000562448 UNC13AQ9UPW8 1703 aa22.22■■□□□ 1.15
PMM2-204ENST00000562448 AEBP2Q6ZN18 517 aaPredicted RBP22.18■■□□□ 1.14
PMM2-204ENST00000562448 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
PMM2-204ENST00000562448 BICRAQ9NZM4 1560 aa22.04■■□□□ 1.12
PMM2-204ENST00000562448 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.09
PMM2-204ENST00000562448 DCAF1Q9Y4B6 1507 aa21.74■■□□□ 1.07
PMM2-204ENST00000562448 SCRIBQ14160 1630 aa21.64■■□□□ 1.05
PMM2-204ENST00000562448 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.05
PMM2-204ENST00000562448 CC2D2AQ9P2K1 1620 aa21.56■■□□□ 1.04
PMM2-204ENST00000562448 CECR2Q9BXF3 1484 aa21.49■■□□□ 1.03
PMM2-204ENST00000562448 EIF4G1Q04637 1599 aaKnown RBP21.47■■□□□ 1.03
PMM2-204ENST00000562448 CHIC1Q5VXU3 224 aa21.46■■□□□ 1.03
PMM2-204ENST00000562448 DNAJC5Q9H3Z4 198 aa20.75■□□□□ 0.91
PMM2-204ENST00000562448 NCAPD3P42695 1498 aa20.72■□□□□ 0.91
PMM2-204ENST00000562448 ATAD2BQ9ULI0 1458 aa20.67■□□□□ 0.9
PMM2-204ENST00000562448 SMARCA4P51532 1647 aa20.61■□□□□ 0.89
PMM2-204ENST00000562448 CUX2O14529 1486 aa20.56■□□□□ 0.88
PMM2-204ENST00000562448 ERCC6Q03468 1493 aa20.56■□□□□ 0.88
PMM2-204ENST00000562448 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
PMM2-204ENST00000562448 HMGXB3Q12766 1538 aa20.54■□□□□ 0.88
PMM2-204ENST00000562448 NESP48681 1621 aa20.51■□□□□ 0.87
PMM2-204ENST00000562448 BAZ1AQ9NRL2 1556 aaPredicted RBP20.46■□□□□ 0.87
PMM2-204ENST00000562448 BAZ1BQ9UIG0 1483 aaKnown RBP20.43■□□□□ 0.86
PMM2-204ENST00000562448 PEG3Q9GZU2 1588 aa20.39■□□□□ 0.85
PMM2-204ENST00000562448 MROH2BQ7Z745 1585 aa20.37■□□□□ 0.85
PMM2-204ENST00000562448 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
PMM2-204ENST00000562448 LAMC3Q9Y6N6 1575 aa20.26■□□□□ 0.83
PMM2-204ENST00000562448 KIF21AQ7Z4S6 1674 aa20.23■□□□□ 0.83
PMM2-204ENST00000562448 WIZO95785 1651 aa20.13■□□□□ 0.81
PMM2-204ENST00000562448 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
PMM2-204ENST00000562448 CADPSQ9ULU8 1353 aa20.09■□□□□ 0.81
PMM2-204ENST00000562448 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
PMM2-204ENST00000562448 WDR62O43379 1518 aa19.96■□□□□ 0.79
PMM2-204ENST00000562448 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
PMM2-204ENST00000562448 RSF1Q96T23 1441 aaPredicted RBP19.88■□□□□ 0.77
PMM2-204ENST00000562448 FANCD2Q9BXW9 1451 aa19.87■□□□□ 0.77
PMM2-204ENST00000562448 CFTRP13569 1480 aa19.85■□□□□ 0.77
PMM2-204ENST00000562448 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
PMM2-204ENST00000562448 TRIM41Q8WV44 630 aa19.8■□□□□ 0.76
PMM2-204ENST00000562448 URB2Q14146 1524 aaKnown RBP19.75■□□□□ 0.75
PMM2-204ENST00000562448 PRDM2Q13029 1718 aa19.65■□□□□ 0.74
PMM2-204ENST00000562448 OSCARQ8IYS5 282 aa19.63■□□□□ 0.73
PMM2-204ENST00000562448 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
PMM2-204ENST00000562448 ZNF608Q9ULD9 1512 aaPredicted RBP19.54■□□□□ 0.72
PMM2-204ENST00000562448 TOPBP1Q92547 1522 aa19.49■□□□□ 0.71
PMM2-204ENST00000562448 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
PMM2-204ENST00000562448 RIMBP3CA6NJZ7 1639 aa19.43■□□□□ 0.7
PMM2-204ENST00000562448 RIMBP3BA6NNM3 1639 aa19.43■□□□□ 0.7
PMM2-204ENST00000562448 RIMBP3Q9UFD9 1639 aa19.43■□□□□ 0.7
PMM2-204ENST00000562448 EIF4G3O43432 1585 aaKnown RBP19.39■□□□□ 0.69
PMM2-204ENST00000562448 DNMBPQ6XZF7 1577 aa19.39■□□□□ 0.69
PMM2-204ENST00000562448 ABCC8Q09428 1581 aa19.37■□□□□ 0.69
PMM2-204ENST00000562448 TARBP1Q13395 1621 aaKnown RBP19.35■□□□□ 0.69
PMM2-204ENST00000562448 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
PMM2-204ENST00000562448 AQRO60306 1485 aaKnown RBP eCLIP19.34■□□□□ 0.693e-9■■■□□ 16.9
PMM2-204ENST00000562448 CHD1O14646 1710 aa19.3■□□□□ 0.68
PMM2-204ENST00000562448 POLA1P09884 1462 aaPredicted RBP19.28■□□□□ 0.68
PMM2-204ENST00000562448 RAD54L2Q9Y4B4 1467 aa19.25■□□□□ 0.67
PMM2-204ENST00000562448 CYB5RLQ6IPT4 315 aa19.22■□□□□ 0.67
PMM2-204ENST00000562448 FBLN2P98095 1184 aa19.21■□□□□ 0.67
PMM2-204ENST00000562448 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
PMM2-204ENST00000562448 SOGA1O94964 1423 aa19.19■□□□□ 0.66
PMM2-204ENST00000562448 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
PMM2-204ENST00000562448 FGD5Q6ZNL6 1462 aa19.15■□□□□ 0.66
PMM2-204ENST00000562448 CUX1P39880 1505 aa19.13■□□□□ 0.65
PMM2-204ENST00000562448 SNAPC4Q5SXM2 1469 aa19.11■□□□□ 0.65
PMM2-204ENST00000562448 WDR97A6NE52 1622 aa19.05■□□□□ 0.64
PMM2-204ENST00000562448 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
PMM2-204ENST00000562448 TRHP20396 242 aaPredicted RBP19.02■□□□□ 0.64
PMM2-204ENST00000562448 CHMP7Q8WUX9 453 aaPredicted RBP19.02■□□□□ 0.64
PMM2-204ENST00000562448 MAGI1Q96QZ7 1491 aaPredicted RBP19.02■□□□□ 0.63
PMM2-204ENST00000562448 GRIN2BQ13224 1484 aa19.01■□□□□ 0.63
PMM2-204ENST00000562448 SYNJ1O43426 1573 aa18.98■□□□□ 0.63
PMM2-204ENST00000562448 PBRM1Q86U86 1689 aa18.97■□□□□ 0.63
PMM2-204ENST00000562448 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
PMM2-204ENST00000562448 GAPVD1Q14C86 1478 aa18.94■□□□□ 0.62
PMM2-204ENST00000562448 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
PMM2-204ENST00000562448 SUPT5HO00267 1087 aaKnown RBP18.92■□□□□ 0.62
PMM2-204ENST00000562448 ABCA5Q8WWZ7 1642 aa18.91■□□□□ 0.62
PMM2-204ENST00000562448 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
PMM2-204ENST00000562448 PHF23Q9BUL5 403 aaPredicted RBP18.82■□□□□ 0.6
PMM2-204ENST00000562448 ERCC6L2Q5T890 1561 aa18.81■□□□□ 0.6
PMM2-204ENST00000562448 GRIN2AQ12879 1464 aa18.78■□□□□ 0.6
PMM2-204ENST00000562448 WRNQ14191 1432 aaPredicted RBP eCLIP18.78■□□□□ 0.6
PMM2-204ENST00000562448 BIVM-ERCC5R4GMW8 1640 aa18.78■□□□□ 0.6
PMM2-204ENST00000562448 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
PMM2-204ENST00000562448 ADAMTS12P58397 1594 aa18.76■□□□□ 0.59
PMM2-204ENST00000562448 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
PMM2-204ENST00000562448 NUP160Q12769 1436 aa18.73■□□□□ 0.59
PMM2-204ENST00000562448 FHAD1B1AJZ9 1412 aa18.68■□□□□ 0.58
PMM2-204ENST00000562448 SHROOM2Q13796 1616 aa18.67■□□□□ 0.58
PMM2-204ENST00000562448 ERICH3Q5RHP9 1530 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms