RNA–Protein interactions for RNA: ENST00000561719.5

LINC01227-202, Transcript of long intergenic non-protein coding RNA 1227, humanhuman

TSL 2 BASIC

Gene LINC01227, Length 755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01227-202ENST00000561719 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
LINC01227-202ENST00000561719 CCDC180Q9P1Z9 1646 aa20.12■□□□□ 0.81
LINC01227-202ENST00000561719 ABCC9O60706 1549 aa19.96■□□□□ 0.79
LINC01227-202ENST00000561719 AEBP2Q6ZN18 517 aaPredicted RBP19.43■□□□□ 0.7
LINC01227-202ENST00000561719 RB1CC1Q8TDY2 1594 aa19.09■□□□□ 0.65
LINC01227-202ENST00000561719 NACADO15069 1562 aa18.95■□□□□ 0.62
LINC01227-202ENST00000561719 MYO15BQ96JP2 1530 aa18.73■□□□□ 0.59
LINC01227-202ENST00000561719 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
LINC01227-202ENST00000561719 DNAJC5BQ9UF47 199 aa18.63■□□□□ 0.57
LINC01227-202ENST00000561719 DCAF8L2P0C7V8 631 aa18.62■□□□□ 0.57
LINC01227-202ENST00000561719 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.56
LINC01227-202ENST00000561719 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
LINC01227-202ENST00000561719 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
LINC01227-202ENST00000561719 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
LINC01227-202ENST00000561719 CHIC1Q5VXU3 224 aa18.46■□□□□ 0.55
LINC01227-202ENST00000561719 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
LINC01227-202ENST00000561719 SCRIBQ14160 1630 aa18.24■□□□□ 0.51
LINC01227-202ENST00000561719 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
LINC01227-202ENST00000561719 EIF4G1Q04637 1599 aaKnown RBP18.07■□□□□ 0.48
LINC01227-202ENST00000561719 CECR2Q9BXF3 1484 aa18■□□□□ 0.47
LINC01227-202ENST00000561719 NCAPD3P42695 1498 aa17.45■□□□□ 0.38
LINC01227-202ENST00000561719 SMARCA4P51532 1647 aa17.43■□□□□ 0.38
LINC01227-202ENST00000561719 ATAD2BQ9ULI0 1458 aa17.4■□□□□ 0.38
LINC01227-202ENST00000561719 HMGXB3Q12766 1538 aa17.4■□□□□ 0.38
LINC01227-202ENST00000561719 SMARCA2P51531 1590 aa17.39■□□□□ 0.37
LINC01227-202ENST00000561719 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
LINC01227-202ENST00000561719 PEG3Q9GZU2 1588 aa17.3■□□□□ 0.36
LINC01227-202ENST00000561719 CUX2O14529 1486 aa17.27■□□□□ 0.36
LINC01227-202ENST00000561719 ERCC6Q03468 1493 aa17.25■□□□□ 0.35
LINC01227-202ENST00000561719 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
LINC01227-202ENST00000561719 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
LINC01227-202ENST00000561719 NESP48681 1621 aa17.15■□□□□ 0.34
LINC01227-202ENST00000561719 DNAJC5Q9H3Z4 198 aa17.14■□□□□ 0.33
LINC01227-202ENST00000561719 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
LINC01227-202ENST00000561719 THOC2Q8NI27 1593 aaKnown RBP17.08■□□□□ 0.32
LINC01227-202ENST00000561719 KIF21AQ7Z4S6 1674 aa17.02■□□□□ 0.32
LINC01227-202ENST00000561719 WIZO95785 1651 aa16.97■□□□□ 0.31
LINC01227-202ENST00000561719 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.3
LINC01227-202ENST00000561719 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.3
LINC01227-202ENST00000561719 MRC2Q9UBG0 1479 aa16.84■□□□□ 0.29
LINC01227-202ENST00000561719 WDR62O43379 1518 aa16.83■□□□□ 0.28
LINC01227-202ENST00000561719 TOP2AP11388 1531 aaKnown RBP16.8■□□□□ 0.28
LINC01227-202ENST00000561719 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
LINC01227-202ENST00000561719 CEP164Q9UPV0 1460 aa16.77■□□□□ 0.28
LINC01227-202ENST00000561719 CFTRP13569 1480 aa16.73■□□□□ 0.27
LINC01227-202ENST00000561719 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
LINC01227-202ENST00000561719 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
LINC01227-202ENST00000561719 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
LINC01227-202ENST00000561719 SENP3Q9H4L4 574 aaPredicted RBP16.59■□□□□ 0.25
LINC01227-202ENST00000561719 CCDC88BA6NC98 1476 aa16.54■□□□□ 0.24
LINC01227-202ENST00000561719 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
LINC01227-202ENST00000561719 IFT140Q96RY7 1462 aa16.42■□□□□ 0.22
LINC01227-202ENST00000561719 ABCC8Q09428 1581 aa16.4■□□□□ 0.22
LINC01227-202ENST00000561719 DNMBPQ6XZF7 1577 aa16.4■□□□□ 0.22
LINC01227-202ENST00000561719 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
LINC01227-202ENST00000561719 ZNF608Q9ULD9 1512 aaPredicted RBP16.37■□□□□ 0.21
LINC01227-202ENST00000561719 EIF4G3O43432 1585 aaKnown RBP16.36■□□□□ 0.21
LINC01227-202ENST00000561719 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
LINC01227-202ENST00000561719 TRIM41Q8WV44 630 aa16.35■□□□□ 0.21
LINC01227-202ENST00000561719 TARBP1Q13395 1621 aaKnown RBP16.31■□□□□ 0.2
LINC01227-202ENST00000561719 RIMBP3CA6NJZ7 1639 aa16.27■□□□□ 0.19
LINC01227-202ENST00000561719 RIMBP3BA6NNM3 1639 aa16.27■□□□□ 0.19
LINC01227-202ENST00000561719 RIMBP3Q9UFD9 1639 aa16.27■□□□□ 0.19
LINC01227-202ENST00000561719 POLA1P09884 1462 aaPredicted RBP16.26■□□□□ 0.19
LINC01227-202ENST00000561719 CHD1O14646 1710 aa16.24■□□□□ 0.19
LINC01227-202ENST00000561719 WDR97A6NE52 1622 aa16.21■□□□□ 0.19
LINC01227-202ENST00000561719 ARHGEF11O15085 1522 aa16.2■□□□□ 0.18
LINC01227-202ENST00000561719 AQRO60306 1485 aaKnown RBP eCLIP16.19■□□□□ 0.18
LINC01227-202ENST00000561719 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
LINC01227-202ENST00000561719 RAD54L2Q9Y4B4 1467 aa16.15■□□□□ 0.18
LINC01227-202ENST00000561719 CUX1P39880 1505 aa16.14■□□□□ 0.17
LINC01227-202ENST00000561719 SOGA1O94964 1423 aa16.13■□□□□ 0.17
LINC01227-202ENST00000561719 SNAPC4Q5SXM2 1469 aa16.08■□□□□ 0.16
LINC01227-202ENST00000561719 TDRD9Q8NDG6 1382 aaKnown RBP16.07■□□□□ 0.16
LINC01227-202ENST00000561719 MAGI1Q96QZ7 1491 aaPredicted RBP16.06■□□□□ 0.16
LINC01227-202ENST00000561719 PBRM1Q86U86 1689 aa16.05■□□□□ 0.16
LINC01227-202ENST00000561719 CLASP1Q7Z460 1538 aa16.04■□□□□ 0.16
LINC01227-202ENST00000561719 GRIN2BQ13224 1484 aa16.03■□□□□ 0.16
LINC01227-202ENST00000561719 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
LINC01227-202ENST00000561719 SYNJ1O43426 1573 aa16.02■□□□□ 0.16
LINC01227-202ENST00000561719 FBLN2P98095 1184 aa16.01■□□□□ 0.15
LINC01227-202ENST00000561719 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
LINC01227-202ENST00000561719 SYNJ2O15056 1496 aa16■□□□□ 0.15
LINC01227-202ENST00000561719 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
LINC01227-202ENST00000561719 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
LINC01227-202ENST00000561719 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
LINC01227-202ENST00000561719 CYB5RLQ6IPT4 315 aa15.94■□□□□ 0.14
LINC01227-202ENST00000561719 SUPT5HO00267 1087 aaKnown RBP15.93■□□□□ 0.14
LINC01227-202ENST00000561719 CHMP7Q8WUX9 453 aaPredicted RBP15.93■□□□□ 0.14
LINC01227-202ENST00000561719 TOP2BQ02880 1626 aa15.92■□□□□ 0.14
LINC01227-202ENST00000561719 WRNQ14191 1432 aaPredicted RBP eCLIP15.89■□□□□ 0.13
LINC01227-202ENST00000561719 ADAMTS12P58397 1594 aa15.88■□□□□ 0.13
LINC01227-202ENST00000561719 GRIN2AQ12879 1464 aa15.84■□□□□ 0.13
LINC01227-202ENST00000561719 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
LINC01227-202ENST00000561719 CEP170Q5SW79 1584 aa15.8■□□□□ 0.12
LINC01227-202ENST00000561719 NUP160Q12769 1436 aa15.79■□□□□ 0.12
LINC01227-202ENST00000561719 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.12
LINC01227-202ENST00000561719 SHROOM2Q13796 1616 aa15.77■□□□□ 0.12
LINC01227-202ENST00000561719 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
LINC01227-202ENST00000561719 ERCC6L2Q5T890 1561 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms