RNA–Protein interactions for RNA: ENST00000560943.5

RASGRF1-207, Transcript of Ras protein specific guanine nucleotide releasing factor 1, humanhuman

TSL 3

Gene RASGRF1, Length 662 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGRF1-207ENST00000560943 NISCHQ9Y2I1 1504 aa22.48■■□□□ 1.19
RASGRF1-207ENST00000560943 ABCC9O60706 1549 aa21.04■□□□□ 0.96
RASGRF1-207ENST00000560943 CCDC180Q9P1Z9 1646 aa20.42■□□□□ 0.86
RASGRF1-207ENST00000560943 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
RASGRF1-207ENST00000560943 RB1CC1Q8TDY2 1594 aa19.73■□□□□ 0.75
RASGRF1-207ENST00000560943 PABPN1Q86U42 306 aaKnown RBP eCLIP19.55■□□□□ 0.72
RASGRF1-207ENST00000560943 DCAF8L2P0C7V8 631 aa19.44■□□□□ 0.7
RASGRF1-207ENST00000560943 NACADO15069 1562 aa19.43■□□□□ 0.7
RASGRF1-207ENST00000560943 UNC13AQ9UPW8 1703 aa19.36■□□□□ 0.69
RASGRF1-207ENST00000560943 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
RASGRF1-207ENST00000560943 CECR2Q9BXF3 1484 aa18.98■□□□□ 0.63
RASGRF1-207ENST00000560943 DNAJC5Q9H3Z4 198 aa18.96■□□□□ 0.63
RASGRF1-207ENST00000560943 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
RASGRF1-207ENST00000560943 MYO15BQ96JP2 1530 aa18.89■□□□□ 0.61
RASGRF1-207ENST00000560943 EIF4G1Q04637 1599 aaKnown RBP18.75■□□□□ 0.59
RASGRF1-207ENST00000560943 SHROOM4Q9ULL8 1493 aa18.73■□□□□ 0.59
RASGRF1-207ENST00000560943 SCRIBQ14160 1630 aa18.65■□□□□ 0.58
RASGRF1-207ENST00000560943 ZCCHC6Q5VYS8 1495 aaKnown RBP18.48■□□□□ 0.55
RASGRF1-207ENST00000560943 DCAF1Q9Y4B6 1507 aa18.46■□□□□ 0.55
RASGRF1-207ENST00000560943 CUX2O14529 1486 aa18.27■□□□□ 0.52
RASGRF1-207ENST00000560943 ERCC6Q03468 1493 aa18.21■□□□□ 0.51
RASGRF1-207ENST00000560943 TRIM41Q8WV44 630 aa18.02■□□□□ 0.48
RASGRF1-207ENST00000560943 NCAPD3P42695 1498 aa17.92■□□□□ 0.46
RASGRF1-207ENST00000560943 NESP48681 1621 aa17.91■□□□□ 0.46
RASGRF1-207ENST00000560943 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
RASGRF1-207ENST00000560943 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
RASGRF1-207ENST00000560943 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
RASGRF1-207ENST00000560943 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
RASGRF1-207ENST00000560943 KIF21AQ7Z4S6 1674 aa17.68■□□□□ 0.42
RASGRF1-207ENST00000560943 SMARCA4P51532 1647 aa17.68■□□□□ 0.42
RASGRF1-207ENST00000560943 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
RASGRF1-207ENST00000560943 LAMC3Q9Y6N6 1575 aa17.64■□□□□ 0.41
RASGRF1-207ENST00000560943 PDS5BQ9NTI5 1447 aa17.57■□□□□ 0.4
RASGRF1-207ENST00000560943 AEBP2Q6ZN18 517 aaPredicted RBP17.5■□□□□ 0.39
RASGRF1-207ENST00000560943 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
RASGRF1-207ENST00000560943 MRC2Q9UBG0 1479 aa17.44■□□□□ 0.38
RASGRF1-207ENST00000560943 OSCARQ8IYS5 282 aa17.44■□□□□ 0.38
RASGRF1-207ENST00000560943 PEG3Q9GZU2 1588 aa17.44■□□□□ 0.38
RASGRF1-207ENST00000560943 WDR62O43379 1518 aa17.39■□□□□ 0.37
RASGRF1-207ENST00000560943 CADPSQ9ULU8 1353 aa17.39■□□□□ 0.37
RASGRF1-207ENST00000560943 MROH2BQ7Z745 1585 aa17.35■□□□□ 0.37
RASGRF1-207ENST00000560943 CEP164Q9UPV0 1460 aa17.28■□□□□ 0.36
RASGRF1-207ENST00000560943 RIMBP3CA6NJZ7 1639 aa17.26■□□□□ 0.35
RASGRF1-207ENST00000560943 RIMBP3BA6NNM3 1639 aa17.26■□□□□ 0.35
RASGRF1-207ENST00000560943 RIMBP3Q9UFD9 1639 aa17.26■□□□□ 0.35
RASGRF1-207ENST00000560943 FANCD2Q9BXW9 1451 aa17.21■□□□□ 0.35
RASGRF1-207ENST00000560943 WIZO95785 1651 aa17.16■□□□□ 0.34
RASGRF1-207ENST00000560943 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
RASGRF1-207ENST00000560943 CYB5RLQ6IPT4 315 aa17.12■□□□□ 0.33
RASGRF1-207ENST00000560943 ARHGEF11O15085 1522 aa17.11■□□□□ 0.33
RASGRF1-207ENST00000560943 URB2Q14146 1524 aaKnown RBP17.1■□□□□ 0.33
RASGRF1-207ENST00000560943 CFTRP13569 1480 aa17.04■□□□□ 0.32
RASGRF1-207ENST00000560943 ZNF608Q9ULD9 1512 aaPredicted RBP17■□□□□ 0.31
RASGRF1-207ENST00000560943 IFT140Q96RY7 1462 aa16.93■□□□□ 0.3
RASGRF1-207ENST00000560943 CHD1O14646 1710 aa16.91■□□□□ 0.3
RASGRF1-207ENST00000560943 PRDM2Q13029 1718 aa16.91■□□□□ 0.3
RASGRF1-207ENST00000560943 CHIC1Q5VXU3 224 aa16.91■□□□□ 0.3
RASGRF1-207ENST00000560943 FBLN2P98095 1184 aa16.9■□□□□ 0.3
RASGRF1-207ENST00000560943 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
RASGRF1-207ENST00000560943 EIF4G3O43432 1585 aaKnown RBP16.87■□□□□ 0.29
RASGRF1-207ENST00000560943 TOP2AP11388 1531 aaKnown RBP16.83■□□□□ 0.28
RASGRF1-207ENST00000560943 TOPBP1Q92547 1522 aa16.82■□□□□ 0.28
RASGRF1-207ENST00000560943 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.28
RASGRF1-207ENST00000560943 RSF1Q96T23 1441 aaPredicted RBP16.78■□□□□ 0.28
RASGRF1-207ENST00000560943 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
RASGRF1-207ENST00000560943 TARBP1Q13395 1621 aaKnown RBP16.7■□□□□ 0.26
RASGRF1-207ENST00000560943 DNMBPQ6XZF7 1577 aa16.69■□□□□ 0.26
RASGRF1-207ENST00000560943 CCDC88BA6NC98 1476 aa16.68■□□□□ 0.26
RASGRF1-207ENST00000560943 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
RASGRF1-207ENST00000560943 TDRD9Q8NDG6 1382 aaKnown RBP16.62■□□□□ 0.25
RASGRF1-207ENST00000560943 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
RASGRF1-207ENST00000560943 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
RASGRF1-207ENST00000560943 RAD54L2Q9Y4B4 1467 aa16.6■□□□□ 0.25
RASGRF1-207ENST00000560943 SYNJ1O43426 1573 aa16.59■□□□□ 0.25
RASGRF1-207ENST00000560943 SNAPC4Q5SXM2 1469 aa16.58■□□□□ 0.24
RASGRF1-207ENST00000560943 SOGA1O94964 1423 aa16.55■□□□□ 0.24
RASGRF1-207ENST00000560943 GAPVD1Q14C86 1478 aa16.51■□□□□ 0.23
RASGRF1-207ENST00000560943 MAGI1Q96QZ7 1491 aaPredicted RBP16.48■□□□□ 0.23
RASGRF1-207ENST00000560943 SYNJ2O15056 1496 aa16.44■□□□□ 0.22
RASGRF1-207ENST00000560943 GRIN2BQ13224 1484 aa16.44■□□□□ 0.22
RASGRF1-207ENST00000560943 FGD5Q6ZNL6 1462 aa16.44■□□□□ 0.22
RASGRF1-207ENST00000560943 WDR97A6NE52 1622 aa16.44■□□□□ 0.22
RASGRF1-207ENST00000560943 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
RASGRF1-207ENST00000560943 ERCC6L2Q5T890 1561 aa16.37■□□□□ 0.21
RASGRF1-207ENST00000560943 KIF13AQ9H1H9 1805 aa16.35■□□□□ 0.21
RASGRF1-207ENST00000560943 ILDR1Q86SU0 546 aaPredicted RBP16.34■□□□□ 0.21
RASGRF1-207ENST00000560943 CUX1P39880 1505 aa16.33■□□□□ 0.2
RASGRF1-207ENST00000560943 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
RASGRF1-207ENST00000560943 GRIN2AQ12879 1464 aa16.22■□□□□ 0.19
RASGRF1-207ENST00000560943 KDM4FA0A1W2PPD8 638 aa16.22■□□□□ 0.19
RASGRF1-207ENST00000560943 FAM69CQ0P6D2 419 aa16.22■□□□□ 0.19
RASGRF1-207ENST00000560943 ABCA5Q8WWZ7 1642 aa16.22■□□□□ 0.19
RASGRF1-207ENST00000560943 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
RASGRF1-207ENST00000560943 TSPOAP1O95153 1857 aa16.16■□□□□ 0.18
RASGRF1-207ENST00000560943 SHROOM2Q13796 1616 aa16.16■□□□□ 0.18
RASGRF1-207ENST00000560943 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
RASGRF1-207ENST00000560943 NUP160Q12769 1436 aa16.16■□□□□ 0.18
RASGRF1-207ENST00000560943 ADAMTS12P58397 1594 aa16.14■□□□□ 0.17
RASGRF1-207ENST00000560943 KDM6BO15054 1643 aa16.13■□□□□ 0.17
RASGRF1-207ENST00000560943 PRG4Q92954 1404 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms