RNA–Protein interactions for RNA: ENST00000558916.1

GATM-209, Transcript of glycine amidinotransferase, humanhuman

TSL 2

Gene GATM, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATM-209ENST00000558916 NISCHQ9Y2I1 1504 aa19.42■□□□□ 0.7
GATM-209ENST00000558916 ABCC9O60706 1549 aa17.54■□□□□ 0.4
GATM-209ENST00000558916 CCDC180Q9P1Z9 1646 aa17.51■□□□□ 0.39
GATM-209ENST00000558916 AEBP2Q6ZN18 517 aaPredicted RBP17.39■□□□□ 0.37
GATM-209ENST00000558916 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
GATM-209ENST00000558916 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
GATM-209ENST00000558916 NACADO15069 1562 aa16.5■□□□□ 0.23
GATM-209ENST00000558916 UNC13AQ9UPW8 1703 aa16.45■□□□□ 0.22
GATM-209ENST00000558916 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
GATM-209ENST00000558916 DCAF8L2P0C7V8 631 aa16.31■□□□□ 0.2
GATM-209ENST00000558916 PABPN1Q86U42 306 aaKnown RBP eCLIP16.27■□□□□ 0.2
GATM-209ENST00000558916 BICRAQ9NZM4 1560 aa16.25■□□□□ 0.19
GATM-209ENST00000558916 MYO15BQ96JP2 1530 aa16.23■□□□□ 0.19
GATM-209ENST00000558916 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
GATM-209ENST00000558916 DCAF1Q9Y4B6 1507 aa16.01■□□□□ 0.15
GATM-209ENST00000558916 SCRIBQ14160 1630 aa15.97■□□□□ 0.15
GATM-209ENST00000558916 SHROOM4Q9ULL8 1493 aa15.9■□□□□ 0.14
GATM-209ENST00000558916 CC2D2AQ9P2K1 1620 aa15.88■□□□□ 0.13
GATM-209ENST00000558916 EIF4G1Q04637 1599 aaKnown RBP15.81■□□□□ 0.12
GATM-209ENST00000558916 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
GATM-209ENST00000558916 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
GATM-209ENST00000558916 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
GATM-209ENST00000558916 ATAD2BQ9ULI0 1458 aa15.19■□□□□ 0.02
GATM-209ENST00000558916 HMGXB3Q12766 1538 aa15.14■□□□□ 0.01
GATM-209ENST00000558916 SMARCA2P51531 1590 aa15.12■□□□□ 0.01
GATM-209ENST00000558916 DNAJC5Q9H3Z4 198 aa15.12■□□□□ 0.01
GATM-209ENST00000558916 CUX2O14529 1486 aa15.1■□□□□ 0.01
GATM-209ENST00000558916 ERCC6Q03468 1493 aa15.09■□□□□ 0.01
GATM-209ENST00000558916 NESP48681 1621 aa15.08■□□□□ 0
GATM-209ENST00000558916 BAZ1AQ9NRL2 1556 aaPredicted RBP15.07■□□□□ 0
GATM-209ENST00000558916 PEG3Q9GZU2 1588 aa15.04■□□□□ -0
GATM-209ENST00000558916 BAZ1BQ9UIG0 1483 aaKnown RBP15.02■□□□□ -0
GATM-209ENST00000558916 MROH2BQ7Z745 1585 aa15□□□□□ -0.01
GATM-209ENST00000558916 SENP3Q9H4L4 574 aaPredicted RBP15□□□□□ -0.01
GATM-209ENST00000558916 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
GATM-209ENST00000558916 KIF21AQ7Z4S6 1674 aa14.95□□□□□ -0.02
GATM-209ENST00000558916 LAMC3Q9Y6N6 1575 aa14.92□□□□□ -0.02
GATM-209ENST00000558916 WIZO95785 1651 aa14.87□□□□□ -0.03
GATM-209ENST00000558916 PDS5BQ9NTI5 1447 aa14.75□□□□□ -0.05
GATM-209ENST00000558916 CADPSQ9ULU8 1353 aa14.73□□□□□ -0.05
GATM-209ENST00000558916 WDR62O43379 1518 aa14.71□□□□□ -0.06
GATM-209ENST00000558916 MRC2Q9UBG0 1479 aa14.69□□□□□ -0.06
GATM-209ENST00000558916 PHF23Q9BUL5 403 aaPredicted RBP14.68□□□□□ -0.06
GATM-209ENST00000558916 CEP164Q9UPV0 1460 aa14.62□□□□□ -0.07
GATM-209ENST00000558916 RSF1Q96T23 1441 aaPredicted RBP14.61□□□□□ -0.07
GATM-209ENST00000558916 TOP2AP11388 1531 aaKnown RBP14.61□□□□□ -0.07
GATM-209ENST00000558916 FANCD2Q9BXW9 1451 aa14.6□□□□□ -0.07
GATM-209ENST00000558916 PRDM2Q13029 1718 aa14.58□□□□□ -0.08
GATM-209ENST00000558916 CFTRP13569 1480 aa14.57□□□□□ -0.08
GATM-209ENST00000558916 URB2Q14146 1524 aaKnown RBP14.53□□□□□ -0.08
GATM-209ENST00000558916 TRIM41Q8WV44 630 aa14.45□□□□□ -0.1
GATM-209ENST00000558916 CCDC88BA6NC98 1476 aa14.43□□□□□ -0.1
GATM-209ENST00000558916 ZNF608Q9ULD9 1512 aaPredicted RBP14.37□□□□□ -0.11
GATM-209ENST00000558916 TOPBP1Q92547 1522 aa14.34□□□□□ -0.11
GATM-209ENST00000558916 EIF4G3O43432 1585 aaKnown RBP14.32□□□□□ -0.12
GATM-209ENST00000558916 RIMBP3CA6NJZ7 1639 aa14.32□□□□□ -0.12
GATM-209ENST00000558916 RIMBP3BA6NNM3 1639 aa14.32□□□□□ -0.12
GATM-209ENST00000558916 RIMBP3Q9UFD9 1639 aa14.32□□□□□ -0.12
GATM-209ENST00000558916 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
GATM-209ENST00000558916 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
GATM-209ENST00000558916 DNMBPQ6XZF7 1577 aa14.3□□□□□ -0.12
GATM-209ENST00000558916 TARBP1Q13395 1621 aaKnown RBP14.27□□□□□ -0.12
GATM-209ENST00000558916 CHD1O14646 1710 aa14.27□□□□□ -0.13
GATM-209ENST00000558916 ARHGEF11O15085 1522 aa14.21□□□□□ -0.13
GATM-209ENST00000558916 ABCC8Q09428 1581 aa14.21□□□□□ -0.14
GATM-209ENST00000558916 AQRO60306 1485 aaKnown RBP eCLIP14.19□□□□□ -0.14
GATM-209ENST00000558916 POLA1P09884 1462 aaPredicted RBP14.19□□□□□ -0.14
GATM-209ENST00000558916 RAD54L2Q9Y4B4 1467 aa14.15□□□□□ -0.14
GATM-209ENST00000558916 WDR97A6NE52 1622 aa14.1□□□□□ -0.15
GATM-209ENST00000558916 CUX1P39880 1505 aa14.1□□□□□ -0.15
GATM-209ENST00000558916 FGD5Q6ZNL6 1462 aa14.09□□□□□ -0.15
GATM-209ENST00000558916 ARAP1Q96P48 1450 aa14.09□□□□□ -0.15
GATM-209ENST00000558916 SOGA1O94964 1423 aa14.07□□□□□ -0.16
GATM-209ENST00000558916 SNAPC4Q5SXM2 1469 aa14.06□□□□□ -0.16
GATM-209ENST00000558916 TDRD9Q8NDG6 1382 aaKnown RBP14.06□□□□□ -0.16
GATM-209ENST00000558916 CLASP1Q7Z460 1538 aa14.05□□□□□ -0.16
GATM-209ENST00000558916 PBRM1Q86U86 1689 aa14.04□□□□□ -0.16
GATM-209ENST00000558916 FBLN2P98095 1184 aa14.02□□□□□ -0.17
GATM-209ENST00000558916 CYB5RLQ6IPT4 315 aa14.02□□□□□ -0.17
GATM-209ENST00000558916 MAGI1Q96QZ7 1491 aaPredicted RBP13.98□□□□□ -0.17
GATM-209ENST00000558916 ABCA5Q8WWZ7 1642 aa13.97□□□□□ -0.17
GATM-209ENST00000558916 SYNJ1O43426 1573 aa13.97□□□□□ -0.17
GATM-209ENST00000558916 GRIN2BQ13224 1484 aa13.96□□□□□ -0.17
GATM-209ENST00000558916 FOXD1Q16676 465 aa13.95□□□□□ -0.18
GATM-209ENST00000558916 SYNJ2O15056 1496 aa13.93□□□□□ -0.18
GATM-209ENST00000558916 GAPVD1Q14C86 1478 aa13.92□□□□□ -0.18
GATM-209ENST00000558916 ABCA10Q8WWZ4 1543 aa13.91□□□□□ -0.18
GATM-209ENST00000558916 CHMP7Q8WUX9 453 aaPredicted RBP13.89□□□□□ -0.19
GATM-209ENST00000558916 BIVM-ERCC5R4GMW8 1640 aa13.88□□□□□ -0.19
GATM-209ENST00000558916 ERCC6L2Q5T890 1561 aa13.87□□□□□ -0.19
GATM-209ENST00000558916 TRHP20396 242 aaPredicted RBP13.86□□□□□ -0.19
GATM-209ENST00000558916 ADAMTS12P58397 1594 aa13.86□□□□□ -0.19
GATM-209ENST00000558916 SUPT5HO00267 1087 aaKnown RBP13.85□□□□□ -0.19
GATM-209ENST00000558916 TOP2BQ02880 1626 aa13.85□□□□□ -0.19
GATM-209ENST00000558916 CEP170Q5SW79 1584 aa13.83□□□□□ -0.19
GATM-209ENST00000558916 GRIN2AQ12879 1464 aa13.81□□□□□ -0.2
GATM-209ENST00000558916 SHROOM2Q13796 1616 aa13.78□□□□□ -0.2
GATM-209ENST00000558916 NUP160Q12769 1436 aa13.77□□□□□ -0.21
GATM-209ENST00000558916 WRNQ14191 1432 aaPredicted RBP eCLIP13.77□□□□□ -0.21
GATM-209ENST00000558916 ERICH3Q5RHP9 1530 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms