RNA–Protein interactions for RNA: ENST00000558817.1

HOMER2-206, Transcript of homer scaffold protein 2, humanhuman

TSL 3

Gene HOMER2, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER2-206ENST00000558817 NISCHQ9Y2I1 1504 aa15.48■□□□□ 0.07
HOMER2-206ENST00000558817 ABCC9O60706 1549 aa14.2□□□□□ -0.14
HOMER2-206ENST00000558817 CCDC180Q9P1Z9 1646 aa13.93□□□□□ -0.18
HOMER2-206ENST00000558817 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
HOMER2-206ENST00000558817 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
HOMER2-206ENST00000558817 DCAF8L2P0C7V8 631 aa13.32□□□□□ -0.28
HOMER2-206ENST00000558817 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
HOMER2-206ENST00000558817 NACADO15069 1562 aa13.2□□□□□ -0.3
HOMER2-206ENST00000558817 UNC13AQ9UPW8 1703 aa13.08□□□□□ -0.32
HOMER2-206ENST00000558817 BICRAQ9NZM4 1560 aa12.95□□□□□ -0.34
HOMER2-206ENST00000558817 AEBP2Q6ZN18 517 aaPredicted RBP12.94□□□□□ -0.34
HOMER2-206ENST00000558817 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
HOMER2-206ENST00000558817 SCRIBQ14160 1630 aa12.81□□□□□ -0.36
HOMER2-206ENST00000558817 ZCCHC6Q5VYS8 1495 aaKnown RBP12.79□□□□□ -0.36
HOMER2-206ENST00000558817 CC2D2AQ9P2K1 1620 aa12.77□□□□□ -0.36
HOMER2-206ENST00000558817 CECR2Q9BXF3 1484 aa12.77□□□□□ -0.37
HOMER2-206ENST00000558817 SHROOM4Q9ULL8 1493 aa12.69□□□□□ -0.38
HOMER2-206ENST00000558817 EIF4G1Q04637 1599 aaKnown RBP12.69□□□□□ -0.38
HOMER2-206ENST00000558817 DCAF1Q9Y4B6 1507 aa12.68□□□□□ -0.38
HOMER2-206ENST00000558817 DNAJC5Q9H3Z4 198 aa12.34□□□□□ -0.43
HOMER2-206ENST00000558817 CHIC1Q5VXU3 224 aa12.3□□□□□ -0.44
HOMER2-206ENST00000558817 ERCC6Q03468 1493 aa12.28□□□□□ -0.44
HOMER2-206ENST00000558817 CUX2O14529 1486 aa12.19□□□□□ -0.46
HOMER2-206ENST00000558817 NCAPD3P42695 1498 aa12.16□□□□□ -0.46
HOMER2-206ENST00000558817 ATAD2BQ9ULI0 1458 aa12.15□□□□□ -0.46
HOMER2-206ENST00000558817 NESP48681 1621 aa12.14□□□□□ -0.47
HOMER2-206ENST00000558817 SMARCA4P51532 1647 aa12.13□□□□□ -0.47
HOMER2-206ENST00000558817 SMARCA2P51531 1590 aa12.11□□□□□ -0.47
HOMER2-206ENST00000558817 HMGXB3Q12766 1538 aa12.09□□□□□ -0.47
HOMER2-206ENST00000558817 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.47
HOMER2-206ENST00000558817 BAZ1AQ9NRL2 1556 aaPredicted RBP12.03□□□□□ -0.48
HOMER2-206ENST00000558817 THOC2Q8NI27 1593 aaKnown RBP12□□□□□ -0.49
HOMER2-206ENST00000558817 KIF21AQ7Z4S6 1674 aa11.97□□□□□ -0.49
HOMER2-206ENST00000558817 MROH2BQ7Z745 1585 aa11.96□□□□□ -0.5
HOMER2-206ENST00000558817 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.5
HOMER2-206ENST00000558817 TRIM41Q8WV44 630 aa11.94□□□□□ -0.5
HOMER2-206ENST00000558817 PEG3Q9GZU2 1588 aa11.92□□□□□ -0.5
HOMER2-206ENST00000558817 PDS5BQ9NTI5 1447 aa11.91□□□□□ -0.5
HOMER2-206ENST00000558817 WIZO95785 1651 aa11.84□□□□□ -0.51
HOMER2-206ENST00000558817 MRC2Q9UBG0 1479 aa11.83□□□□□ -0.52
HOMER2-206ENST00000558817 CADPSQ9ULU8 1353 aa11.83□□□□□ -0.52
HOMER2-206ENST00000558817 WDR62O43379 1518 aa11.78□□□□□ -0.52
HOMER2-206ENST00000558817 CEP164Q9UPV0 1460 aa11.77□□□□□ -0.52
HOMER2-206ENST00000558817 FANCD2Q9BXW9 1451 aa11.75□□□□□ -0.53
HOMER2-206ENST00000558817 CFTRP13569 1480 aa11.65□□□□□ -0.54
HOMER2-206ENST00000558817 OSCARQ8IYS5 282 aa11.65□□□□□ -0.54
HOMER2-206ENST00000558817 TOP2AP11388 1531 aaKnown RBP11.64□□□□□ -0.55
HOMER2-206ENST00000558817 URB2Q14146 1524 aaKnown RBP11.64□□□□□ -0.55
HOMER2-206ENST00000558817 RSF1Q96T23 1441 aaPredicted RBP11.63□□□□□ -0.55
HOMER2-206ENST00000558817 PRDM2Q13029 1718 aa11.55□□□□□ -0.56
HOMER2-206ENST00000558817 ZNF608Q9ULD9 1512 aaPredicted RBP11.55□□□□□ -0.56
HOMER2-206ENST00000558817 RIMBP3CA6NJZ7 1639 aa11.53□□□□□ -0.56
HOMER2-206ENST00000558817 RIMBP3BA6NNM3 1639 aa11.53□□□□□ -0.56
HOMER2-206ENST00000558817 RIMBP3Q9UFD9 1639 aa11.53□□□□□ -0.56
HOMER2-206ENST00000558817 CCDC88BA6NC98 1476 aa11.51□□□□□ -0.57
HOMER2-206ENST00000558817 IFT140Q96RY7 1462 aa11.51□□□□□ -0.57
HOMER2-206ENST00000558817 TOPBP1Q92547 1522 aa11.49□□□□□ -0.57
HOMER2-206ENST00000558817 EIF4G3O43432 1585 aaKnown RBP11.49□□□□□ -0.57
HOMER2-206ENST00000558817 FBLN2P98095 1184 aa11.48□□□□□ -0.57
HOMER2-206ENST00000558817 ARHGEF11O15085 1522 aa11.48□□□□□ -0.57
HOMER2-206ENST00000558817 CYB5RLQ6IPT4 315 aa11.45□□□□□ -0.58
HOMER2-206ENST00000558817 TRHP20396 242 aaPredicted RBP11.44□□□□□ -0.58
HOMER2-206ENST00000558817 AQRO60306 1485 aaKnown RBP eCLIP11.44□□□□□ -0.58
HOMER2-206ENST00000558817 CHD1O14646 1710 aa11.43□□□□□ -0.58
HOMER2-206ENST00000558817 DNMBPQ6XZF7 1577 aa11.43□□□□□ -0.58
HOMER2-206ENST00000558817 ABCC8Q09428 1581 aa11.4□□□□□ -0.58
HOMER2-206ENST00000558817 TARBP1Q13395 1621 aaKnown RBP11.38□□□□□ -0.59
HOMER2-206ENST00000558817 POLA1P09884 1462 aaPredicted RBP11.37□□□□□ -0.59
HOMER2-206ENST00000558817 RAD54L2Q9Y4B4 1467 aa11.37□□□□□ -0.59
HOMER2-206ENST00000558817 ARAP1Q96P48 1450 aa11.36□□□□□ -0.59
HOMER2-206ENST00000558817 TDRD9Q8NDG6 1382 aaKnown RBP11.35□□□□□ -0.59
HOMER2-206ENST00000558817 SOGA1O94964 1423 aa11.32□□□□□ -0.6
HOMER2-206ENST00000558817 SNAPC4Q5SXM2 1469 aa11.32□□□□□ -0.6
HOMER2-206ENST00000558817 FGD5Q6ZNL6 1462 aa11.3□□□□□ -0.6
HOMER2-206ENST00000558817 CHMP7Q8WUX9 453 aaPredicted RBP11.29□□□□□ -0.6
HOMER2-206ENST00000558817 SENP3Q9H4L4 574 aaPredicted RBP11.28□□□□□ -0.6
HOMER2-206ENST00000558817 SYNJ1O43426 1573 aa11.25□□□□□ -0.61
HOMER2-206ENST00000558817 CUX1P39880 1505 aa11.25□□□□□ -0.61
HOMER2-206ENST00000558817 CLASP1Q7Z460 1538 aa11.23□□□□□ -0.61
HOMER2-206ENST00000558817 GRIN2BQ13224 1484 aa11.22□□□□□ -0.61
HOMER2-206ENST00000558817 MAGI1Q96QZ7 1491 aaPredicted RBP11.21□□□□□ -0.61
HOMER2-206ENST00000558817 PBRM1Q86U86 1689 aa11.2□□□□□ -0.62
HOMER2-206ENST00000558817 SYNJ2O15056 1496 aa11.2□□□□□ -0.62
HOMER2-206ENST00000558817 WDR97A6NE52 1622 aa11.19□□□□□ -0.62
HOMER2-206ENST00000558817 GAPVD1Q14C86 1478 aa11.18□□□□□ -0.62
HOMER2-206ENST00000558817 SUPT5HO00267 1087 aaKnown RBP11.17□□□□□ -0.62
HOMER2-206ENST00000558817 ABCA5Q8WWZ7 1642 aa11.12□□□□□ -0.63
HOMER2-206ENST00000558817 ERCC6L2Q5T890 1561 aa11.11□□□□□ -0.63
HOMER2-206ENST00000558817 ABCA10Q8WWZ4 1543 aa11.1□□□□□ -0.63
HOMER2-206ENST00000558817 GRIN2AQ12879 1464 aa11.09□□□□□ -0.63
HOMER2-206ENST00000558817 ADAMTS12P58397 1594 aa11.07□□□□□ -0.64
HOMER2-206ENST00000558817 CEP170Q5SW79 1584 aa11.07□□□□□ -0.64
HOMER2-206ENST00000558817 WRNQ14191 1432 aaPredicted RBP eCLIP11.06□□□□□ -0.64
HOMER2-206ENST00000558817 PHF23Q9BUL5 403 aaPredicted RBP11.01□□□□□ -0.65
HOMER2-206ENST00000558817 TOP2BQ02880 1626 aa11.01□□□□□ -0.65
HOMER2-206ENST00000558817 FHAD1B1AJZ9 1412 aa11.01□□□□□ -0.65
HOMER2-206ENST00000558817 NUP160Q12769 1436 aa11.01□□□□□ -0.65
HOMER2-206ENST00000558817 BIVM-ERCC5R4GMW8 1640 aa11□□□□□ -0.65
HOMER2-206ENST00000558817 PRG4Q92954 1404 aaPredicted RBP10.99□□□□□ -0.65
HOMER2-206ENST00000558817 SHROOM2Q13796 1616 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms