RNA–Protein interactions for RNA: ENST00000558406.5

MRPS11-204, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 2

Gene MRPS11, Length 918 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-204ENST00000558406 NISCHQ9Y2I1 1504 aa31.65■■■□□ 2.66
MRPS11-204ENST00000558406 ABCC9O60706 1549 aa28.61■■■□□ 2.17
MRPS11-204ENST00000558406 CCDC180Q9P1Z9 1646 aa28.51■■■□□ 2.15
MRPS11-204ENST00000558406 DNAJC5BQ9UF47 199 aa27.2■■□□□ 1.94
MRPS11-204ENST00000558406 RB1CC1Q8TDY2 1594 aa27.19■■□□□ 1.94
MRPS11-204ENST00000558406 AEBP2Q6ZN18 517 aaPredicted RBP27.09■■□□□ 1.93
MRPS11-204ENST00000558406 NACADO15069 1562 aa27■■□□□ 1.91
MRPS11-204ENST00000558406 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
MRPS11-204ENST00000558406 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
MRPS11-204ENST00000558406 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
MRPS11-204ENST00000558406 UNC13AQ9UPW8 1703 aa26.51■■□□□ 1.83
MRPS11-204ENST00000558406 BICRAQ9NZM4 1560 aa26.41■■□□□ 1.82
MRPS11-204ENST00000558406 DCAF1Q9Y4B6 1507 aa26.23■■□□□ 1.79
MRPS11-204ENST00000558406 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
MRPS11-204ENST00000558406 ZCCHC6Q5VYS8 1495 aaKnown RBP26.21■■□□□ 1.79
MRPS11-204ENST00000558406 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
MRPS11-204ENST00000558406 SCRIBQ14160 1630 aa25.85■■□□□ 1.73
MRPS11-204ENST00000558406 CC2D2AQ9P2K1 1620 aa25.85■■□□□ 1.73
MRPS11-204ENST00000558406 CECR2Q9BXF3 1484 aa25.82■■□□□ 1.72
MRPS11-204ENST00000558406 EIF4G1Q04637 1599 aaKnown RBP25.74■■□□□ 1.71
MRPS11-204ENST00000558406 DNAJC5Q9H3Z4 198 aa25.14■■□□□ 1.62
MRPS11-204ENST00000558406 NCAPD3P42695 1498 aa24.91■■□□□ 1.58
MRPS11-204ENST00000558406 CUX2O14529 1486 aa24.78■■□□□ 1.56
MRPS11-204ENST00000558406 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
MRPS11-204ENST00000558406 SMARCA2P51531 1590 aa24.74■■□□□ 1.55
MRPS11-204ENST00000558406 HMGXB3Q12766 1538 aa24.72■■□□□ 1.55
MRPS11-204ENST00000558406 SMARCA4P51532 1647 aa24.7■■□□□ 1.54
MRPS11-204ENST00000558406 ERCC6Q03468 1493 aa24.69■■□□□ 1.54
MRPS11-204ENST00000558406 BAZ1AQ9NRL2 1556 aaPredicted RBP24.61■■□□□ 1.53
MRPS11-204ENST00000558406 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
MRPS11-204ENST00000558406 NESP48681 1621 aa24.53■■□□□ 1.52
MRPS11-204ENST00000558406 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
MRPS11-204ENST00000558406 LAMC3Q9Y6N6 1575 aa24.37■■□□□ 1.49
MRPS11-204ENST00000558406 THOC2Q8NI27 1593 aaKnown RBP24.33■■□□□ 1.49
MRPS11-204ENST00000558406 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.48
MRPS11-204ENST00000558406 PDS5BQ9NTI5 1447 aa24.24■■□□□ 1.47
MRPS11-204ENST00000558406 KIF21AQ7Z4S6 1674 aa24.17■■□□□ 1.46
MRPS11-204ENST00000558406 CADPSQ9ULU8 1353 aa24.12■■□□□ 1.45
MRPS11-204ENST00000558406 MRC2Q9UBG0 1479 aa24.01■■□□□ 1.43
MRPS11-204ENST00000558406 WIZO95785 1651 aa24■■□□□ 1.43
MRPS11-204ENST00000558406 WDR62O43379 1518 aa23.97■■□□□ 1.43
MRPS11-204ENST00000558406 CEP164Q9UPV0 1460 aa23.88■■□□□ 1.41
MRPS11-204ENST00000558406 CFTRP13569 1480 aa23.83■■□□□ 1.41
MRPS11-204ENST00000558406 FANCD2Q9BXW9 1451 aa23.83■■□□□ 1.41
MRPS11-204ENST00000558406 TRIM41Q8WV44 630 aa23.81■■□□□ 1.4
MRPS11-204ENST00000558406 RSF1Q96T23 1441 aaPredicted RBP23.79■■□□□ 1.4
MRPS11-204ENST00000558406 TOP2AP11388 1531 aaKnown RBP23.77■■□□□ 1.4
MRPS11-204ENST00000558406 URB2Q14146 1524 aaKnown RBP23.64■■□□□ 1.37
MRPS11-204ENST00000558406 OSCARQ8IYS5 282 aa23.61■■□□□ 1.37
MRPS11-204ENST00000558406 PRDM2Q13029 1718 aa23.56■■□□□ 1.36
MRPS11-204ENST00000558406 CCDC88BA6NC98 1476 aa23.46■■□□□ 1.35
MRPS11-204ENST00000558406 IFT140Q96RY7 1462 aa23.43■■□□□ 1.34
MRPS11-204ENST00000558406 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
MRPS11-204ENST00000558406 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
MRPS11-204ENST00000558406 TOPBP1Q92547 1522 aa23.35■■□□□ 1.33
MRPS11-204ENST00000558406 RIMBP3CA6NJZ7 1639 aa23.33■■□□□ 1.32
MRPS11-204ENST00000558406 RIMBP3BA6NNM3 1639 aa23.33■■□□□ 1.32
MRPS11-204ENST00000558406 RIMBP3Q9UFD9 1639 aa23.33■■□□□ 1.32
MRPS11-204ENST00000558406 DNMBPQ6XZF7 1577 aa23.28■■□□□ 1.32
MRPS11-204ENST00000558406 ARHGEF11O15085 1522 aa23.23■■□□□ 1.31
MRPS11-204ENST00000558406 EIF4G3O43432 1585 aaKnown RBP23.23■■□□□ 1.31
MRPS11-204ENST00000558406 TARBP1Q13395 1621 aaKnown RBP23.17■■□□□ 1.3
MRPS11-204ENST00000558406 AQRO60306 1485 aaKnown RBP eCLIP23.12■■□□□ 1.29
MRPS11-204ENST00000558406 POLA1P09884 1462 aaPredicted RBP23.11■■□□□ 1.29
MRPS11-204ENST00000558406 CYB5RLQ6IPT4 315 aa23.06■■□□□ 1.28
MRPS11-204ENST00000558406 SENP3Q9H4L4 574 aaPredicted RBP23.06■■□□□ 1.28
MRPS11-204ENST00000558406 CHD1O14646 1710 aa23.05■■□□□ 1.28
MRPS11-204ENST00000558406 WDR97A6NE52 1622 aa23.04■■□□□ 1.28
MRPS11-204ENST00000558406 ARAP1Q96P48 1450 aa23■■□□□ 1.27
MRPS11-204ENST00000558406 PHF23Q9BUL5 403 aaPredicted RBP23■■□□□ 1.27
MRPS11-204ENST00000558406 SOGA1O94964 1423 aa22.99■■□□□ 1.27
MRPS11-204ENST00000558406 RAD54L2Q9Y4B4 1467 aa22.98■■□□□ 1.27
MRPS11-204ENST00000558406 FBLN2P98095 1184 aa22.94■■□□□ 1.26
MRPS11-204ENST00000558406 TDRD9Q8NDG6 1382 aaKnown RBP22.93■■□□□ 1.26
MRPS11-204ENST00000558406 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
MRPS11-204ENST00000558406 MAGI1Q96QZ7 1491 aaPredicted RBP22.89■■□□□ 1.25
MRPS11-204ENST00000558406 SNAPC4Q5SXM2 1469 aa22.88■■□□□ 1.25
MRPS11-204ENST00000558406 CUX1P39880 1505 aa22.87■■□□□ 1.25
MRPS11-204ENST00000558406 CLASP1Q7Z460 1538 aa22.85■■□□□ 1.25
MRPS11-204ENST00000558406 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
MRPS11-204ENST00000558406 TRHP20396 242 aaPredicted RBP22.83■■□□□ 1.25
MRPS11-204ENST00000558406 SYNJ1O43426 1573 aa22.83■■□□□ 1.25
MRPS11-204ENST00000558406 CHMP7Q8WUX9 453 aaPredicted RBP22.8■■□□□ 1.24
MRPS11-204ENST00000558406 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
MRPS11-204ENST00000558406 GAPVD1Q14C86 1478 aa22.72■■□□□ 1.23
MRPS11-204ENST00000558406 ABCA10Q8WWZ4 1543 aa22.71■■□□□ 1.23
MRPS11-204ENST00000558406 PBRM1Q86U86 1689 aa22.7■■□□□ 1.22
MRPS11-204ENST00000558406 ABCA5Q8WWZ7 1642 aa22.68■■□□□ 1.22
MRPS11-204ENST00000558406 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.21
MRPS11-204ENST00000558406 GRIN2AQ12879 1464 aa22.54■■□□□ 1.2
MRPS11-204ENST00000558406 TOP2BQ02880 1626 aa22.51■■□□□ 1.19
MRPS11-204ENST00000558406 BIVM-ERCC5R4GMW8 1640 aa22.51■■□□□ 1.19
MRPS11-204ENST00000558406 ADAMTS12P58397 1594 aa22.5■■□□□ 1.19
MRPS11-204ENST00000558406 SUPT5HO00267 1087 aaKnown RBP22.5■■□□□ 1.19
MRPS11-204ENST00000558406 NUP160Q12769 1436 aa22.49■■□□□ 1.19
MRPS11-204ENST00000558406 ERCC6L2Q5T890 1561 aa22.47■■□□□ 1.19
MRPS11-204ENST00000558406 FHAD1B1AJZ9 1412 aa22.46■■□□□ 1.19
MRPS11-204ENST00000558406 ERICH3Q5RHP9 1530 aa22.44■■□□□ 1.18
MRPS11-204ENST00000558406 CEP170Q5SW79 1584 aa22.43■■□□□ 1.18
MRPS11-204ENST00000558406 SHROOM2Q13796 1616 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms