RNA–Protein interactions for RNA: ENST00000557915.1

TINF2-204, Transcript of TERF1 interacting nuclear factor 2, humanhuman

TSL 2

Gene TINF2, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TINF2-204ENST00000557915 NISCHQ9Y2I1 1504 aa18.21■□□□□ 0.51
TINF2-204ENST00000557915 ABCC9O60706 1549 aa16.5■□□□□ 0.23
TINF2-204ENST00000557915 CCDC180Q9P1Z9 1646 aa16.49■□□□□ 0.23
TINF2-204ENST00000557915 AEBP2Q6ZN18 517 aaPredicted RBP15.81■□□□□ 0.12
TINF2-204ENST00000557915 RB1CC1Q8TDY2 1594 aa15.65■□□□□ 0.1
TINF2-204ENST00000557915 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
TINF2-204ENST00000557915 DNAJC5BQ9UF47 199 aa15.53■□□□□ 0.08
TINF2-204ENST00000557915 NACADO15069 1562 aa15.49■□□□□ 0.07
TINF2-204ENST00000557915 DCAF8L2P0C7V8 631 aa15.36■□□□□ 0.05
TINF2-204ENST00000557915 PABPN1Q86U42 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
TINF2-204ENST00000557915 BICRAQ9NZM4 1560 aa15.29■□□□□ 0.04
TINF2-204ENST00000557915 CHIC1Q5VXU3 224 aa15.18■□□□□ 0.02
TINF2-204ENST00000557915 MYO15BQ96JP2 1530 aa15.17■□□□□ 0.02
TINF2-204ENST00000557915 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0
TINF2-204ENST00000557915 SCRIBQ14160 1630 aa15.05■□□□□ -0
TINF2-204ENST00000557915 DCAF1Q9Y4B6 1507 aa14.97□□□□□ -0.01
TINF2-204ENST00000557915 CC2D2AQ9P2K1 1620 aa14.97□□□□□ -0.01
TINF2-204ENST00000557915 EIF4G1Q04637 1599 aaKnown RBP14.86□□□□□ -0.03
TINF2-204ENST00000557915 SHROOM4Q9ULL8 1493 aa14.86□□□□□ -0.03
TINF2-204ENST00000557915 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
TINF2-204ENST00000557915 SMARCA4P51532 1647 aa14.31□□□□□ -0.12
TINF2-204ENST00000557915 NCAPD3P42695 1498 aa14.24□□□□□ -0.13
TINF2-204ENST00000557915 ATAD2BQ9ULI0 1458 aa14.24□□□□□ -0.13
TINF2-204ENST00000557915 DNAJC5Q9H3Z4 198 aa14.22□□□□□ -0.13
TINF2-204ENST00000557915 HMGXB3Q12766 1538 aa14.2□□□□□ -0.14
TINF2-204ENST00000557915 ERCC6Q03468 1493 aa14.2□□□□□ -0.14
TINF2-204ENST00000557915 NESP48681 1621 aa14.2□□□□□ -0.14
TINF2-204ENST00000557915 SMARCA2P51531 1590 aa14.2□□□□□ -0.14
TINF2-204ENST00000557915 CUX2O14529 1486 aa14.17□□□□□ -0.14
TINF2-204ENST00000557915 KIF21AQ7Z4S6 1674 aa14.17□□□□□ -0.14
TINF2-204ENST00000557915 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
TINF2-204ENST00000557915 THOC2Q8NI27 1593 aaKnown RBP14.11□□□□□ -0.15
TINF2-204ENST00000557915 BAZ1BQ9UIG0 1483 aaKnown RBP14.11□□□□□ -0.15
TINF2-204ENST00000557915 PEG3Q9GZU2 1588 aa14.09□□□□□ -0.15
TINF2-204ENST00000557915 MROH2BQ7Z745 1585 aa14.09□□□□□ -0.15
TINF2-204ENST00000557915 WIZO95785 1651 aa14.02□□□□□ -0.16
TINF2-204ENST00000557915 LAMC3Q9Y6N6 1575 aa14.02□□□□□ -0.16
TINF2-204ENST00000557915 PRDM2Q13029 1718 aa13.84□□□□□ -0.19
TINF2-204ENST00000557915 PDS5BQ9NTI5 1447 aa13.83□□□□□ -0.2
TINF2-204ENST00000557915 WDR62O43379 1518 aa13.81□□□□□ -0.2
TINF2-204ENST00000557915 MRC2Q9UBG0 1479 aa13.8□□□□□ -0.2
TINF2-204ENST00000557915 CADPSQ9ULU8 1353 aa13.79□□□□□ -0.2
TINF2-204ENST00000557915 CEP164Q9UPV0 1460 aa13.73□□□□□ -0.21
TINF2-204ENST00000557915 TOP2AP11388 1531 aaKnown RBP13.7□□□□□ -0.22
TINF2-204ENST00000557915 FANCD2Q9BXW9 1451 aa13.7□□□□□ -0.22
TINF2-204ENST00000557915 SENP3Q9H4L4 574 aaPredicted RBP13.7□□□□□ -0.22
TINF2-204ENST00000557915 RSF1Q96T23 1441 aaPredicted RBP13.68□□□□□ -0.22
TINF2-204ENST00000557915 URB2Q14146 1524 aaKnown RBP13.65□□□□□ -0.22
TINF2-204ENST00000557915 CFTRP13569 1480 aa13.65□□□□□ -0.22
TINF2-204ENST00000557915 TRIM41Q8WV44 630 aa13.64□□□□□ -0.23
TINF2-204ENST00000557915 CHD1O14646 1710 aa13.53□□□□□ -0.24
TINF2-204ENST00000557915 CCDC88BA6NC98 1476 aa13.53□□□□□ -0.24
TINF2-204ENST00000557915 RIMBP3CA6NJZ7 1639 aa13.51□□□□□ -0.25
TINF2-204ENST00000557915 RIMBP3BA6NNM3 1639 aa13.51□□□□□ -0.25
TINF2-204ENST00000557915 RIMBP3Q9UFD9 1639 aa13.51□□□□□ -0.25
TINF2-204ENST00000557915 ZNF608Q9ULD9 1512 aaPredicted RBP13.5□□□□□ -0.25
TINF2-204ENST00000557915 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
TINF2-204ENST00000557915 TOPBP1Q92547 1522 aa13.47□□□□□ -0.25
TINF2-204ENST00000557915 OSCARQ8IYS5 282 aa13.44□□□□□ -0.26
TINF2-204ENST00000557915 PHF23Q9BUL5 403 aaPredicted RBP13.44□□□□□ -0.26
TINF2-204ENST00000557915 TARBP1Q13395 1621 aaKnown RBP13.43□□□□□ -0.26
TINF2-204ENST00000557915 DNMBPQ6XZF7 1577 aa13.43□□□□□ -0.26
TINF2-204ENST00000557915 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
TINF2-204ENST00000557915 ARHGEF11O15085 1522 aa13.37□□□□□ -0.27
TINF2-204ENST00000557915 AQRO60306 1485 aaKnown RBP eCLIP13.33□□□□□ -0.28
TINF2-204ENST00000557915 ABCC8Q09428 1581 aa13.32□□□□□ -0.28
TINF2-204ENST00000557915 POLA1P09884 1462 aaPredicted RBP13.31□□□□□ -0.28
TINF2-204ENST00000557915 WDR97A6NE52 1622 aa13.3□□□□□ -0.28
TINF2-204ENST00000557915 RAD54L2Q9Y4B4 1467 aa13.29□□□□□ -0.28
TINF2-204ENST00000557915 PBRM1Q86U86 1689 aa13.29□□□□□ -0.28
TINF2-204ENST00000557915 CUX1P39880 1505 aa13.24□□□□□ -0.29
TINF2-204ENST00000557915 FGD5Q6ZNL6 1462 aa13.23□□□□□ -0.29
TINF2-204ENST00000557915 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
TINF2-204ENST00000557915 FBLN2P98095 1184 aa13.21□□□□□ -0.29
TINF2-204ENST00000557915 TDRD9Q8NDG6 1382 aaKnown RBP13.2□□□□□ -0.3
TINF2-204ENST00000557915 SNAPC4Q5SXM2 1469 aa13.2□□□□□ -0.3
TINF2-204ENST00000557915 CLASP1Q7Z460 1538 aa13.19□□□□□ -0.3
TINF2-204ENST00000557915 CYB5RLQ6IPT4 315 aa13.19□□□□□ -0.3
TINF2-204ENST00000557915 SOGA1O94964 1423 aa13.19□□□□□ -0.3
TINF2-204ENST00000557915 SYNJ1O43426 1573 aa13.14□□□□□ -0.31
TINF2-204ENST00000557915 ABCA5Q8WWZ7 1642 aa13.13□□□□□ -0.31
TINF2-204ENST00000557915 MAGI1Q96QZ7 1491 aaPredicted RBP13.11□□□□□ -0.31
TINF2-204ENST00000557915 GRIN2BQ13224 1484 aa13.09□□□□□ -0.31
TINF2-204ENST00000557915 TRHP20396 242 aaPredicted RBP13.07□□□□□ -0.32
TINF2-204ENST00000557915 SYNJ2O15056 1496 aa13.07□□□□□ -0.32
TINF2-204ENST00000557915 BIVM-ERCC5R4GMW8 1640 aa13.06□□□□□ -0.32
TINF2-204ENST00000557915 GAPVD1Q14C86 1478 aa13.06□□□□□ -0.32
TINF2-204ENST00000557915 ERCC6L2Q5T890 1561 aa13.06□□□□□ -0.32
TINF2-204ENST00000557915 CHMP7Q8WUX9 453 aaPredicted RBP13.04□□□□□ -0.32
TINF2-204ENST00000557915 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
TINF2-204ENST00000557915 ADAMTS12P58397 1594 aa13.03□□□□□ -0.32
TINF2-204ENST00000557915 SUPT5HO00267 1087 aaKnown RBP13.02□□□□□ -0.33
TINF2-204ENST00000557915 CEP170Q5SW79 1584 aa13.01□□□□□ -0.33
TINF2-204ENST00000557915 TOP2BQ02880 1626 aa13.01□□□□□ -0.33
TINF2-204ENST00000557915 KIF13AQ9H1H9 1805 aa13.01□□□□□ -0.33
TINF2-204ENST00000557915 SHROOM2Q13796 1616 aa12.97□□□□□ -0.33
TINF2-204ENST00000557915 GRIN2AQ12879 1464 aa12.97□□□□□ -0.33
TINF2-204ENST00000557915 WRNQ14191 1432 aaPredicted RBP eCLIP12.9□□□□□ -0.34
TINF2-204ENST00000557915 NUP160Q12769 1436 aa12.89□□□□□ -0.35
TINF2-204ENST00000557915 ERICH3Q5RHP9 1530 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms