RNA–Protein interactions for RNA: ENST00000557831.1

RMDN3-203, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 954 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-203ENST00000557831 NISCHQ9Y2I1 1504 aa22.58■■□□□ 1.21
RMDN3-203ENST00000557831 ABCC9O60706 1549 aa20.35■□□□□ 0.85
RMDN3-203ENST00000557831 CCDC180Q9P1Z9 1646 aa20.19■□□□□ 0.82
RMDN3-203ENST00000557831 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
RMDN3-203ENST00000557831 DNAJC5BQ9UF47 199 aa19.21■□□□□ 0.67
RMDN3-203ENST00000557831 DCAF8L2P0C7V8 631 aa19.17■□□□□ 0.66
RMDN3-203ENST00000557831 NACADO15069 1562 aa19.14■□□□□ 0.65
RMDN3-203ENST00000557831 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
RMDN3-203ENST00000557831 PABPN1Q86U42 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
RMDN3-203ENST00000557831 UNC13AQ9UPW8 1703 aa18.91■□□□□ 0.62
RMDN3-203ENST00000557831 AEBP2Q6ZN18 517 aaPredicted RBP18.86■□□□□ 0.61
RMDN3-203ENST00000557831 MYO15BQ96JP2 1530 aa18.85■□□□□ 0.61
RMDN3-203ENST00000557831 BICRAQ9NZM4 1560 aa18.76■□□□□ 0.59
RMDN3-203ENST00000557831 ZCCHC6Q5VYS8 1495 aaKnown RBP18.69■□□□□ 0.58
RMDN3-203ENST00000557831 DCAF1Q9Y4B6 1507 aa18.6■□□□□ 0.57
RMDN3-203ENST00000557831 SCRIBQ14160 1630 aa18.47■□□□□ 0.55
RMDN3-203ENST00000557831 SHROOM4Q9ULL8 1493 aa18.42■□□□□ 0.54
RMDN3-203ENST00000557831 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
RMDN3-203ENST00000557831 CECR2Q9BXF3 1484 aa18.32■□□□□ 0.52
RMDN3-203ENST00000557831 EIF4G1Q04637 1599 aaKnown RBP18.29■□□□□ 0.52
RMDN3-203ENST00000557831 NCAPD3P42695 1498 aa17.71■□□□□ 0.43
RMDN3-203ENST00000557831 ATAD2BQ9ULI0 1458 aa17.66■□□□□ 0.42
RMDN3-203ENST00000557831 DNAJC5Q9H3Z4 198 aa17.61■□□□□ 0.41
RMDN3-203ENST00000557831 SMARCA4P51532 1647 aa17.6■□□□□ 0.41
RMDN3-203ENST00000557831 SMARCA2P51531 1590 aa17.56■□□□□ 0.4
RMDN3-203ENST00000557831 ERCC6Q03468 1493 aa17.54■□□□□ 0.4
RMDN3-203ENST00000557831 HMGXB3Q12766 1538 aa17.53■□□□□ 0.4
RMDN3-203ENST00000557831 BAZ1AQ9NRL2 1556 aaPredicted RBP17.5■□□□□ 0.39
RMDN3-203ENST00000557831 CUX2O14529 1486 aa17.5■□□□□ 0.39
RMDN3-203ENST00000557831 NESP48681 1621 aa17.49■□□□□ 0.39
RMDN3-203ENST00000557831 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
RMDN3-203ENST00000557831 MROH2BQ7Z745 1585 aa17.44■□□□□ 0.38
RMDN3-203ENST00000557831 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
RMDN3-203ENST00000557831 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
RMDN3-203ENST00000557831 THOC2Q8NI27 1593 aaKnown RBP17.24■□□□□ 0.35
RMDN3-203ENST00000557831 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.34
RMDN3-203ENST00000557831 WIZO95785 1651 aa17.2■□□□□ 0.34
RMDN3-203ENST00000557831 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
RMDN3-203ENST00000557831 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
RMDN3-203ENST00000557831 MRC2Q9UBG0 1479 aa17.06■□□□□ 0.32
RMDN3-203ENST00000557831 RSF1Q96T23 1441 aaPredicted RBP17.06■□□□□ 0.32
RMDN3-203ENST00000557831 WDR62O43379 1518 aa17.01■□□□□ 0.31
RMDN3-203ENST00000557831 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
RMDN3-203ENST00000557831 CEP164Q9UPV0 1460 aa16.98■□□□□ 0.31
RMDN3-203ENST00000557831 CFTRP13569 1480 aa16.97■□□□□ 0.31
RMDN3-203ENST00000557831 TOP2AP11388 1531 aaKnown RBP16.95■□□□□ 0.3
RMDN3-203ENST00000557831 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
RMDN3-203ENST00000557831 TRIM41Q8WV44 630 aa16.84■□□□□ 0.29
RMDN3-203ENST00000557831 PHF23Q9BUL5 403 aaPredicted RBP16.82■□□□□ 0.28
RMDN3-203ENST00000557831 CCDC88BA6NC98 1476 aa16.81■□□□□ 0.28
RMDN3-203ENST00000557831 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
RMDN3-203ENST00000557831 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
RMDN3-203ENST00000557831 ZNF608Q9ULD9 1512 aaPredicted RBP16.67■□□□□ 0.26
RMDN3-203ENST00000557831 TOPBP1Q92547 1522 aa16.65■□□□□ 0.26
RMDN3-203ENST00000557831 IFT140Q96RY7 1462 aa16.65■□□□□ 0.26
RMDN3-203ENST00000557831 ABCC8Q09428 1581 aa16.57■□□□□ 0.24
RMDN3-203ENST00000557831 DNMBPQ6XZF7 1577 aa16.56■□□□□ 0.24
RMDN3-203ENST00000557831 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.242e-6■■■□□ 15.2
RMDN3-203ENST00000557831 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
RMDN3-203ENST00000557831 RIMBP3CA6NJZ7 1639 aa16.49■□□□□ 0.23
RMDN3-203ENST00000557831 RIMBP3BA6NNM3 1639 aa16.49■□□□□ 0.23
RMDN3-203ENST00000557831 TARBP1Q13395 1621 aaKnown RBP16.49■□□□□ 0.23
RMDN3-203ENST00000557831 RIMBP3Q9UFD9 1639 aa16.49■□□□□ 0.23
RMDN3-203ENST00000557831 POLA1P09884 1462 aaPredicted RBP16.48■□□□□ 0.23
RMDN3-203ENST00000557831 RAD54L2Q9Y4B4 1467 aa16.47■□□□□ 0.23
RMDN3-203ENST00000557831 CHD1O14646 1710 aa16.45■□□□□ 0.22
RMDN3-203ENST00000557831 ARHGEF11O15085 1522 aa16.45■□□□□ 0.22
RMDN3-203ENST00000557831 FBLN2P98095 1184 aa16.44■□□□□ 0.22
RMDN3-203ENST00000557831 SOGA1O94964 1423 aa16.44■□□□□ 0.22
RMDN3-203ENST00000557831 TDRD9Q8NDG6 1382 aaKnown RBP16.43■□□□□ 0.22
RMDN3-203ENST00000557831 CYB5RLQ6IPT4 315 aa16.39■□□□□ 0.21
RMDN3-203ENST00000557831 FGD5Q6ZNL6 1462 aa16.38■□□□□ 0.21
RMDN3-203ENST00000557831 CUX1P39880 1505 aa16.36■□□□□ 0.21
RMDN3-203ENST00000557831 SUPT5HO00267 1087 aaKnown RBP16.34■□□□□ 0.21
RMDN3-203ENST00000557831 SNAPC4Q5SXM2 1469 aa16.32■□□□□ 0.2
RMDN3-203ENST00000557831 ARAP1Q96P48 1450 aa16.3■□□□□ 0.2
RMDN3-203ENST00000557831 CHMP7Q8WUX9 453 aaPredicted RBP16.29■□□□□ 0.2
RMDN3-203ENST00000557831 GRIN2BQ13224 1484 aa16.26■□□□□ 0.19
RMDN3-203ENST00000557831 WDR97A6NE52 1622 aa16.25■□□□□ 0.19
RMDN3-203ENST00000557831 MAGI1Q96QZ7 1491 aaPredicted RBP16.24■□□□□ 0.19
RMDN3-203ENST00000557831 CLASP1Q7Z460 1538 aa16.22■□□□□ 0.19
RMDN3-203ENST00000557831 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.19
RMDN3-203ENST00000557831 SYNJ2O15056 1496 aa16.21■□□□□ 0.19
RMDN3-203ENST00000557831 GAPVD1Q14C86 1478 aa16.21■□□□□ 0.19
RMDN3-203ENST00000557831 SYNJ1O43426 1573 aa16.18■□□□□ 0.18
RMDN3-203ENST00000557831 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
RMDN3-203ENST00000557831 PBRM1Q86U86 1689 aa16.16■□□□□ 0.18
RMDN3-203ENST00000557831 ABCA5Q8WWZ7 1642 aa16.13■□□□□ 0.17
RMDN3-203ENST00000557831 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
RMDN3-203ENST00000557831 TOP2BQ02880 1626 aa16.05■□□□□ 0.16
RMDN3-203ENST00000557831 GRIN2AQ12879 1464 aa16.05■□□□□ 0.16
RMDN3-203ENST00000557831 BIVM-ERCC5R4GMW8 1640 aa16.04■□□□□ 0.16
RMDN3-203ENST00000557831 ERCC6L2Q5T890 1561 aa16.02■□□□□ 0.16
RMDN3-203ENST00000557831 ADAMTS12P58397 1594 aa16.01■□□□□ 0.15
RMDN3-203ENST00000557831 NUP160Q12769 1436 aa16.01■□□□□ 0.15
RMDN3-203ENST00000557831 CEP170Q5SW79 1584 aa16■□□□□ 0.15
RMDN3-203ENST00000557831 FHAD1B1AJZ9 1412 aa16■□□□□ 0.15
RMDN3-203ENST00000557831 ERICH3Q5RHP9 1530 aa15.95■□□□□ 0.14
RMDN3-203ENST00000557831 SHROOM2Q13796 1616 aa15.9■□□□□ 0.14
RMDN3-203ENST00000557831 JPH4Q96JJ6 628 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms