RNA–Protein interactions for RNA: ENST00000557755.5

CGRRF1-209, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 3

Gene CGRRF1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-209ENST00000557755 NISCHQ9Y2I1 1504 aa28.98■■■□□ 2.23
CGRRF1-209ENST00000557755 ABCC9O60706 1549 aa27.27■■□□□ 1.96
CGRRF1-209ENST00000557755 DNAJC5BQ9UF47 199 aa26.4■■□□□ 1.82
CGRRF1-209ENST00000557755 CCDC180Q9P1Z9 1646 aa26.29■■□□□ 1.8
CGRRF1-209ENST00000557755 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
CGRRF1-209ENST00000557755 AEBP2Q6ZN18 517 aaPredicted RBP25.44■■□□□ 1.66
CGRRF1-209ENST00000557755 PABPN1Q86U42 306 aaKnown RBP eCLIP25.3■■□□□ 1.64
CGRRF1-209ENST00000557755 NACADO15069 1562 aa25.05■■□□□ 1.6
CGRRF1-209ENST00000557755 UNC13AQ9UPW8 1703 aa25.01■■□□□ 1.59
CGRRF1-209ENST00000557755 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
CGRRF1-209ENST00000557755 BICRAQ9NZM4 1560 aa24.85■■□□□ 1.57
CGRRF1-209ENST00000557755 DNAJC5Q9H3Z4 198 aa24.7■■□□□ 1.54
CGRRF1-209ENST00000557755 CECR2Q9BXF3 1484 aa24.59■■□□□ 1.53
CGRRF1-209ENST00000557755 CC2D2AQ9P2K1 1620 aa24.55■■□□□ 1.52
CGRRF1-209ENST00000557755 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
CGRRF1-209ENST00000557755 EIF4G1Q04637 1599 aaKnown RBP24.26■■□□□ 1.47
CGRRF1-209ENST00000557755 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
CGRRF1-209ENST00000557755 SCRIBQ14160 1630 aa24.06■■□□□ 1.44
CGRRF1-209ENST00000557755 ZCCHC6Q5VYS8 1495 aaKnown RBP23.84■■□□□ 1.41
CGRRF1-209ENST00000557755 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
CGRRF1-209ENST00000557755 DCAF1Q9Y4B6 1507 aa23.77■■□□□ 1.4
CGRRF1-209ENST00000557755 CUX2O14529 1486 aa23.68■■□□□ 1.38
CGRRF1-209ENST00000557755 ERCC6Q03468 1493 aa23.52■■□□□ 1.36
CGRRF1-209ENST00000557755 TRIM41Q8WV44 630 aa23.37■■□□□ 1.33
CGRRF1-209ENST00000557755 NESP48681 1621 aa23.23■■□□□ 1.31
CGRRF1-209ENST00000557755 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
CGRRF1-209ENST00000557755 THOC2Q8NI27 1593 aaKnown RBP23.07■■□□□ 1.28
CGRRF1-209ENST00000557755 ATAD2BQ9ULI0 1458 aa23.03■■□□□ 1.28
CGRRF1-209ENST00000557755 SMARCA2P51531 1590 aa22.94■■□□□ 1.26
CGRRF1-209ENST00000557755 HMGXB3Q12766 1538 aa22.9■■□□□ 1.26
CGRRF1-209ENST00000557755 KIF21AQ7Z4S6 1674 aa22.86■■□□□ 1.25
CGRRF1-209ENST00000557755 SMARCA4P51532 1647 aa22.8■■□□□ 1.24
CGRRF1-209ENST00000557755 LAMC3Q9Y6N6 1575 aa22.75■■□□□ 1.23
CGRRF1-209ENST00000557755 BAZ1BQ9UIG0 1483 aaKnown RBP22.74■■□□□ 1.23
CGRRF1-209ENST00000557755 PDS5BQ9NTI5 1447 aa22.64■■□□□ 1.21
CGRRF1-209ENST00000557755 BAZ1AQ9NRL2 1556 aaPredicted RBP22.62■■□□□ 1.21
CGRRF1-209ENST00000557755 MRC2Q9UBG0 1479 aa22.55■■□□□ 1.2
CGRRF1-209ENST00000557755 WDR62O43379 1518 aa22.52■■□□□ 1.2
CGRRF1-209ENST00000557755 PEG3Q9GZU2 1588 aa22.51■■□□□ 1.19
CGRRF1-209ENST00000557755 OSCARQ8IYS5 282 aa22.51■■□□□ 1.19
CGRRF1-209ENST00000557755 CADPSQ9ULU8 1353 aa22.44■■□□□ 1.18
CGRRF1-209ENST00000557755 MROH2BQ7Z745 1585 aa22.4■■□□□ 1.18
CGRRF1-209ENST00000557755 RIMBP3CA6NJZ7 1639 aa22.39■■□□□ 1.17
CGRRF1-209ENST00000557755 RIMBP3BA6NNM3 1639 aa22.39■■□□□ 1.17
CGRRF1-209ENST00000557755 RIMBP3Q9UFD9 1639 aa22.39■■□□□ 1.17
CGRRF1-209ENST00000557755 CEP164Q9UPV0 1460 aa22.29■■□□□ 1.16
CGRRF1-209ENST00000557755 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
CGRRF1-209ENST00000557755 ARHGEF11O15085 1522 aa22.21■■□□□ 1.15
CGRRF1-209ENST00000557755 URB2Q14146 1524 aaKnown RBP22.14■■□□□ 1.13
CGRRF1-209ENST00000557755 TRHP20396 242 aaPredicted RBP22.13■■□□□ 1.13
CGRRF1-209ENST00000557755 CYB5RLQ6IPT4 315 aa22.13■■□□□ 1.13
CGRRF1-209ENST00000557755 WIZO95785 1651 aa22.11■■□□□ 1.13
CGRRF1-209ENST00000557755 ZNF608Q9ULD9 1512 aaPredicted RBP22.04■■□□□ 1.12
CGRRF1-209ENST00000557755 CFTRP13569 1480 aa22.01■■□□□ 1.11
CGRRF1-209ENST00000557755 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
CGRRF1-209ENST00000557755 IFT140Q96RY7 1462 aa21.85■■□□□ 1.09
CGRRF1-209ENST00000557755 CHD1O14646 1710 aa21.85■■□□□ 1.09
CGRRF1-209ENST00000557755 EIF4G3O43432 1585 aaKnown RBP21.81■■□□□ 1.08
CGRRF1-209ENST00000557755 FBLN2P98095 1184 aa21.73■■□□□ 1.07
CGRRF1-209ENST00000557755 PRDM2Q13029 1718 aa21.72■■□□□ 1.07
CGRRF1-209ENST00000557755 TOPBP1Q92547 1522 aa21.72■■□□□ 1.07
CGRRF1-209ENST00000557755 AQRO60306 1485 aaKnown RBP eCLIP21.71■■□□□ 1.07
CGRRF1-209ENST00000557755 RSF1Q96T23 1441 aaPredicted RBP21.7■■□□□ 1.06
CGRRF1-209ENST00000557755 TOP2AP11388 1531 aaKnown RBP21.67■■□□□ 1.06
CGRRF1-209ENST00000557755 TARBP1Q13395 1621 aaKnown RBP21.59■■□□□ 1.05
CGRRF1-209ENST00000557755 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
CGRRF1-209ENST00000557755 CLASP1Q7Z460 1538 aa21.52■■□□□ 1.04
CGRRF1-209ENST00000557755 CCDC88BA6NC98 1476 aa21.49■■□□□ 1.03
CGRRF1-209ENST00000557755 ABCC8Q09428 1581 aa21.47■■□□□ 1.03
CGRRF1-209ENST00000557755 TDRD9Q8NDG6 1382 aaKnown RBP21.46■■□□□ 1.03
CGRRF1-209ENST00000557755 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.03
CGRRF1-209ENST00000557755 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.02
CGRRF1-209ENST00000557755 SNAPC4Q5SXM2 1469 aa21.44■■□□□ 1.02
CGRRF1-209ENST00000557755 SENP3Q9H4L4 574 aaPredicted RBP21.43■■□□□ 1.02
CGRRF1-209ENST00000557755 SYNJ1O43426 1573 aa21.37■■□□□ 1.01
CGRRF1-209ENST00000557755 CHMP7Q8WUX9 453 aaPredicted RBP21.36■■□□□ 1.01
CGRRF1-209ENST00000557755 GAPVD1Q14C86 1478 aa21.36■■□□□ 1.01
CGRRF1-209ENST00000557755 SOGA1O94964 1423 aa21.31■■□□□ 1
CGRRF1-209ENST00000557755 ILDR1Q86SU0 546 aaPredicted RBP21.3■■□□□ 1
CGRRF1-209ENST00000557755 ERCC6L2Q5T890 1561 aa21.25■□□□□ 0.99
CGRRF1-209ENST00000557755 PHF23Q9BUL5 403 aaPredicted RBP21.25■□□□□ 0.99
CGRRF1-209ENST00000557755 MAGI1Q96QZ7 1491 aaPredicted RBP21.25■□□□□ 0.99
CGRRF1-209ENST00000557755 SYNJ2O15056 1496 aa21.22■□□□□ 0.99
CGRRF1-209ENST00000557755 FGD5Q6ZNL6 1462 aa21.21■□□□□ 0.99
CGRRF1-209ENST00000557755 GRIN2BQ13224 1484 aa21.19■□□□□ 0.98
CGRRF1-209ENST00000557755 KIF13AQ9H1H9 1805 aa21.16■□□□□ 0.98
CGRRF1-209ENST00000557755 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
CGRRF1-209ENST00000557755 PBRM1Q86U86 1689 aa21.11■□□□□ 0.97
CGRRF1-209ENST00000557755 KDM4FA0A1W2PPD8 638 aa21.08■□□□□ 0.97
CGRRF1-209ENST00000557755 CUX1P39880 1505 aa21.08■□□□□ 0.96
CGRRF1-209ENST00000557755 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
CGRRF1-209ENST00000557755 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
CGRRF1-209ENST00000557755 ABCA5Q8WWZ7 1642 aa20.94■□□□□ 0.94
CGRRF1-209ENST00000557755 FAM69CQ0P6D2 419 aa20.93■□□□□ 0.94
CGRRF1-209ENST00000557755 SHROOM2Q13796 1616 aa20.91■□□□□ 0.94
CGRRF1-209ENST00000557755 NUP160Q12769 1436 aa20.9■□□□□ 0.94
CGRRF1-209ENST00000557755 ABCA10Q8WWZ4 1543 aa20.86■□□□□ 0.93
CGRRF1-209ENST00000557755 ABCC10Q5T3U5 1492 aa20.86■□□□□ 0.93
CGRRF1-209ENST00000557755 KDM6BO15054 1643 aa20.85■□□□□ 0.93
CGRRF1-209ENST00000557755 ADAMTS12P58397 1594 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms