RNA–Protein interactions for RNA: ENST00000557142.5

LINC01588-213, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 3 BASIC

Gene LINC01588, Length 492 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-213ENST00000557142 NISCHQ9Y2I1 1504 aa21.3■■□□□ 1
LINC01588-213ENST00000557142 ABCC9O60706 1549 aa19.93■□□□□ 0.78
LINC01588-213ENST00000557142 CCDC180Q9P1Z9 1646 aa19.3■□□□□ 0.68
LINC01588-213ENST00000557142 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
LINC01588-213ENST00000557142 RB1CC1Q8TDY2 1594 aa18.65■□□□□ 0.58
LINC01588-213ENST00000557142 PABPN1Q86U42 306 aaKnown RBP eCLIP18.53■□□□□ 0.56
LINC01588-213ENST00000557142 DCAF8L2P0C7V8 631 aa18.48■□□□□ 0.55
LINC01588-213ENST00000557142 AEBP2Q6ZN18 517 aaPredicted RBP18.43■□□□□ 0.54
LINC01588-213ENST00000557142 NACADO15069 1562 aa18.36■□□□□ 0.53
LINC01588-213ENST00000557142 UNC13AQ9UPW8 1703 aa18.32■□□□□ 0.52
LINC01588-213ENST00000557142 BICRAQ9NZM4 1560 aa18.12■□□□□ 0.49
LINC01588-213ENST00000557142 CECR2Q9BXF3 1484 aa17.95■□□□□ 0.46
LINC01588-213ENST00000557142 CC2D2AQ9P2K1 1620 aa17.93■□□□□ 0.46
LINC01588-213ENST00000557142 DNAJC5Q9H3Z4 198 aa17.85■□□□□ 0.45
LINC01588-213ENST00000557142 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
LINC01588-213ENST00000557142 EIF4G1Q04637 1599 aaKnown RBP17.73■□□□□ 0.43
LINC01588-213ENST00000557142 SCRIBQ14160 1630 aa17.71■□□□□ 0.43
LINC01588-213ENST00000557142 SHROOM4Q9ULL8 1493 aa17.66■□□□□ 0.42
LINC01588-213ENST00000557142 ZCCHC6Q5VYS8 1495 aaKnown RBP17.52■□□□□ 0.4
LINC01588-213ENST00000557142 DCAF1Q9Y4B6 1507 aa17.45■□□□□ 0.38
LINC01588-213ENST00000557142 CUX2O14529 1486 aa17.24■□□□□ 0.35
LINC01588-213ENST00000557142 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
LINC01588-213ENST00000557142 CHIC1Q5VXU3 224 aa17.2■□□□□ 0.34
LINC01588-213ENST00000557142 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
LINC01588-213ENST00000557142 NESP48681 1621 aa16.97■□□□□ 0.31
LINC01588-213ENST00000557142 NCAPD3P42695 1498 aa16.93■□□□□ 0.3
LINC01588-213ENST00000557142 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
LINC01588-213ENST00000557142 THOC2Q8NI27 1593 aaKnown RBP16.82■□□□□ 0.28
LINC01588-213ENST00000557142 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
LINC01588-213ENST00000557142 HMGXB3Q12766 1538 aa16.76■□□□□ 0.27
LINC01588-213ENST00000557142 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
LINC01588-213ENST00000557142 SMARCA4P51532 1647 aa16.75■□□□□ 0.27
LINC01588-213ENST00000557142 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
LINC01588-213ENST00000557142 LAMC3Q9Y6N6 1575 aa16.67■□□□□ 0.26
LINC01588-213ENST00000557142 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
LINC01588-213ENST00000557142 BAZ1AQ9NRL2 1556 aaPredicted RBP16.56■□□□□ 0.24
LINC01588-213ENST00000557142 MRC2Q9UBG0 1479 aa16.51■□□□□ 0.23
LINC01588-213ENST00000557142 PEG3Q9GZU2 1588 aa16.48■□□□□ 0.23
LINC01588-213ENST00000557142 OSCARQ8IYS5 282 aa16.47■□□□□ 0.23
LINC01588-213ENST00000557142 MROH2BQ7Z745 1585 aa16.46■□□□□ 0.23
LINC01588-213ENST00000557142 WDR62O43379 1518 aa16.45■□□□□ 0.22
LINC01588-213ENST00000557142 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
LINC01588-213ENST00000557142 CEP164Q9UPV0 1460 aa16.36■□□□□ 0.21
LINC01588-213ENST00000557142 RIMBP3CA6NJZ7 1639 aa16.32■□□□□ 0.2
LINC01588-213ENST00000557142 RIMBP3BA6NNM3 1639 aa16.32■□□□□ 0.2
LINC01588-213ENST00000557142 RIMBP3Q9UFD9 1639 aa16.32■□□□□ 0.2
LINC01588-213ENST00000557142 FANCD2Q9BXW9 1451 aa16.3■□□□□ 0.2
LINC01588-213ENST00000557142 WIZO95785 1651 aa16.3■□□□□ 0.2
LINC01588-213ENST00000557142 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
LINC01588-213ENST00000557142 CYB5RLQ6IPT4 315 aa16.2■□□□□ 0.18
LINC01588-213ENST00000557142 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
LINC01588-213ENST00000557142 ARHGEF11O15085 1522 aa16.18■□□□□ 0.18
LINC01588-213ENST00000557142 CFTRP13569 1480 aa16.13■□□□□ 0.17
LINC01588-213ENST00000557142 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
LINC01588-213ENST00000557142 FBLN2P98095 1184 aa16.03■□□□□ 0.16
LINC01588-213ENST00000557142 CHD1O14646 1710 aa16.02■□□□□ 0.16
LINC01588-213ENST00000557142 IFT140Q96RY7 1462 aa16.02■□□□□ 0.15
LINC01588-213ENST00000557142 PRDM2Q13029 1718 aa16.02■□□□□ 0.15
LINC01588-213ENST00000557142 ARAP1Q96P48 1450 aa15.98■□□□□ 0.15
LINC01588-213ENST00000557142 EIF4G3O43432 1585 aaKnown RBP15.97■□□□□ 0.15
LINC01588-213ENST00000557142 TOP2AP11388 1531 aaKnown RBP15.96■□□□□ 0.15
LINC01588-213ENST00000557142 TOPBP1Q92547 1522 aa15.93■□□□□ 0.14
LINC01588-213ENST00000557142 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.14
LINC01588-213ENST00000557142 RSF1Q96T23 1441 aaPredicted RBP15.91■□□□□ 0.14
LINC01588-213ENST00000557142 SENP3Q9H4L4 574 aaPredicted RBP15.87■□□□□ 0.13
LINC01588-213ENST00000557142 CCDC88BA6NC98 1476 aa15.83■□□□□ 0.12
LINC01588-213ENST00000557142 TARBP1Q13395 1621 aaKnown RBP15.81■□□□□ 0.12
LINC01588-213ENST00000557142 DNMBPQ6XZF7 1577 aa15.81■□□□□ 0.12
LINC01588-213ENST00000557142 ABCC8Q09428 1581 aa15.8■□□□□ 0.12
LINC01588-213ENST00000557142 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
LINC01588-213ENST00000557142 RAD54L2Q9Y4B4 1467 aa15.75■□□□□ 0.11
LINC01588-213ENST00000557142 CHMP7Q8WUX9 453 aaPredicted RBP15.74■□□□□ 0.11
LINC01588-213ENST00000557142 POLA1P09884 1462 aaPredicted RBP15.72■□□□□ 0.11
LINC01588-213ENST00000557142 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.11
LINC01588-213ENST00000557142 CLASP1Q7Z460 1538 aa15.69■□□□□ 0.1
LINC01588-213ENST00000557142 SYNJ1O43426 1573 aa15.69■□□□□ 0.1
LINC01588-213ENST00000557142 SOGA1O94964 1423 aa15.68■□□□□ 0.1
LINC01588-213ENST00000557142 POTEDQ86YR6 584 aa15.66■□□□□ 0.1
LINC01588-213ENST00000557142 GAPVD1Q14C86 1478 aa15.62■□□□□ 0.09
LINC01588-213ENST00000557142 FGD5Q6ZNL6 1462 aa15.59■□□□□ 0.09
LINC01588-213ENST00000557142 MAGI1Q96QZ7 1491 aaPredicted RBP15.58■□□□□ 0.08
LINC01588-213ENST00000557142 SYNJ2O15056 1496 aa15.56■□□□□ 0.08
LINC01588-213ENST00000557142 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
LINC01588-213ENST00000557142 PBRM1Q86U86 1689 aa15.55■□□□□ 0.08
LINC01588-213ENST00000557142 PHF23Q9BUL5 403 aaPredicted RBP15.54■□□□□ 0.08
LINC01588-213ENST00000557142 WDR97A6NE52 1622 aa15.52■□□□□ 0.08
LINC01588-213ENST00000557142 ERCC6L2Q5T890 1561 aa15.52■□□□□ 0.07
LINC01588-213ENST00000557142 CUX1P39880 1505 aa15.48■□□□□ 0.07
LINC01588-213ENST00000557142 KIF13AQ9H1H9 1805 aa15.46■□□□□ 0.07
LINC01588-213ENST00000557142 ILDR1Q86SU0 546 aaPredicted RBP15.42■□□□□ 0.06
LINC01588-213ENST00000557142 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
LINC01588-213ENST00000557142 GRIN2AQ12879 1464 aa15.37■□□□□ 0.05
LINC01588-213ENST00000557142 FAM69CQ0P6D2 419 aa15.36■□□□□ 0.05
LINC01588-213ENST00000557142 ABCA5Q8WWZ7 1642 aa15.35■□□□□ 0.05
LINC01588-213ENST00000557142 KDM4FA0A1W2PPD8 638 aa15.33■□□□□ 0.04
LINC01588-213ENST00000557142 TSPOAP1O95153 1857 aa15.33■□□□□ 0.04
LINC01588-213ENST00000557142 ABCA10Q8WWZ4 1543 aa15.32■□□□□ 0.04
LINC01588-213ENST00000557142 ADAMTS12P58397 1594 aa15.3■□□□□ 0.04
LINC01588-213ENST00000557142 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.04
LINC01588-213ENST00000557142 SHROOM2Q13796 1616 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms