RNA–Protein interactions for RNA: ENST00000556656.5

CDK2-212, Transcript of cyclin dependent kinase 2, humanhuman

TSL 3

Gene CDK2, Length 1,136 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2-212ENST00000556656 NISCHQ9Y2I1 1504 aa23.31■■□□□ 1.32
CDK2-212ENST00000556656 ABCC9O60706 1549 aa20.97■□□□□ 0.95
CDK2-212ENST00000556656 CCDC180Q9P1Z9 1646 aa20.88■□□□□ 0.93
CDK2-212ENST00000556656 AEBP2Q6ZN18 517 aaPredicted RBP20.43■□□□□ 0.86
CDK2-212ENST00000556656 RB1CC1Q8TDY2 1594 aa19.85■□□□□ 0.77
CDK2-212ENST00000556656 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
CDK2-212ENST00000556656 DCAF8L2P0C7V8 631 aa19.73■□□□□ 0.75
CDK2-212ENST00000556656 NACADO15069 1562 aa19.69■□□□□ 0.74
CDK2-212ENST00000556656 DNAJC5BQ9UF47 199 aa19.66■□□□□ 0.74
CDK2-212ENST00000556656 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
CDK2-212ENST00000556656 PABPN1Q86U42 306 aaKnown RBP eCLIP19.53■□□□□ 0.72
CDK2-212ENST00000556656 BICRAQ9NZM4 1560 aa19.37■□□□□ 0.69
CDK2-212ENST00000556656 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
CDK2-212ENST00000556656 ZCCHC6Q5VYS8 1495 aaKnown RBP19.33■□□□□ 0.68
CDK2-212ENST00000556656 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
CDK2-212ENST00000556656 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
CDK2-212ENST00000556656 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
CDK2-212ENST00000556656 SHROOM4Q9ULL8 1493 aa18.88■□□□□ 0.61
CDK2-212ENST00000556656 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
CDK2-212ENST00000556656 CECR2Q9BXF3 1484 aa18.82■□□□□ 0.6
CDK2-212ENST00000556656 SMARCA4P51532 1647 aa18.22■□□□□ 0.51
CDK2-212ENST00000556656 ATAD2BQ9ULI0 1458 aa18.19■□□□□ 0.5
CDK2-212ENST00000556656 NCAPD3P42695 1498 aa18.17■□□□□ 0.5
CDK2-212ENST00000556656 SMARCA2P51531 1590 aa18.09■□□□□ 0.49
CDK2-212ENST00000556656 HMGXB3Q12766 1538 aa18.07■□□□□ 0.48
CDK2-212ENST00000556656 NESP48681 1621 aa18.05■□□□□ 0.48
CDK2-212ENST00000556656 BAZ1AQ9NRL2 1556 aaPredicted RBP18.05■□□□□ 0.48
CDK2-212ENST00000556656 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
CDK2-212ENST00000556656 ERCC6Q03468 1493 aa18.02■□□□□ 0.48
CDK2-212ENST00000556656 BAZ1BQ9UIG0 1483 aaKnown RBP18.01■□□□□ 0.47
CDK2-212ENST00000556656 PEG3Q9GZU2 1588 aa17.96■□□□□ 0.46
CDK2-212ENST00000556656 CUX2O14529 1486 aa17.91■□□□□ 0.46
CDK2-212ENST00000556656 DNAJC5Q9H3Z4 198 aa17.89■□□□□ 0.45
CDK2-212ENST00000556656 WIZO95785 1651 aa17.86■□□□□ 0.45
CDK2-212ENST00000556656 KIF21AQ7Z4S6 1674 aa17.83■□□□□ 0.45
CDK2-212ENST00000556656 THOC2Q8NI27 1593 aaKnown RBP17.82■□□□□ 0.44
CDK2-212ENST00000556656 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
CDK2-212ENST00000556656 CADPSQ9ULU8 1353 aa17.64■□□□□ 0.41
CDK2-212ENST00000556656 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.41
CDK2-212ENST00000556656 RSF1Q96T23 1441 aaPredicted RBP17.62■□□□□ 0.41
CDK2-212ENST00000556656 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
CDK2-212ENST00000556656 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
CDK2-212ENST00000556656 WDR62O43379 1518 aa17.52■□□□□ 0.39
CDK2-212ENST00000556656 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
CDK2-212ENST00000556656 CEP164Q9UPV0 1460 aa17.49■□□□□ 0.39
CDK2-212ENST00000556656 CFTRP13569 1480 aa17.46■□□□□ 0.39
CDK2-212ENST00000556656 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
CDK2-212ENST00000556656 URB2Q14146 1524 aaKnown RBP17.4■□□□□ 0.38
CDK2-212ENST00000556656 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
CDK2-212ENST00000556656 CCDC88BA6NC98 1476 aa17.36■□□□□ 0.37
CDK2-212ENST00000556656 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
CDK2-212ENST00000556656 TRIM41Q8WV44 630 aa17.25■□□□□ 0.35
CDK2-212ENST00000556656 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
CDK2-212ENST00000556656 TOPBP1Q92547 1522 aa17.18■□□□□ 0.34
CDK2-212ENST00000556656 DNMBPQ6XZF7 1577 aa17.11■□□□□ 0.33
CDK2-212ENST00000556656 IFT140Q96RY7 1462 aa17.1■□□□□ 0.33
CDK2-212ENST00000556656 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
CDK2-212ENST00000556656 EIF4G3O43432 1585 aaKnown RBP17.09■□□□□ 0.33
CDK2-212ENST00000556656 TARBP1Q13395 1621 aaKnown RBP17.05■□□□□ 0.32
CDK2-212ENST00000556656 AQRO60306 1485 aaKnown RBP eCLIP17.03■□□□□ 0.324e-43■■■■■ 96.5
CDK2-212ENST00000556656 CHD1O14646 1710 aa17.01■□□□□ 0.31
CDK2-212ENST00000556656 POLA1P09884 1462 aaPredicted RBP17■□□□□ 0.31
CDK2-212ENST00000556656 RAD54L2Q9Y4B4 1467 aa17■□□□□ 0.31
CDK2-212ENST00000556656 RIMBP3CA6NJZ7 1639 aa17■□□□□ 0.31
CDK2-212ENST00000556656 RIMBP3BA6NNM3 1639 aa17■□□□□ 0.31
CDK2-212ENST00000556656 RIMBP3Q9UFD9 1639 aa17■□□□□ 0.31
CDK2-212ENST00000556656 ABCC8Q09428 1581 aa17■□□□□ 0.31
CDK2-212ENST00000556656 CUX1P39880 1505 aa16.94■□□□□ 0.3
CDK2-212ENST00000556656 SUPT5HO00267 1087 aaKnown RBP16.93■□□□□ 0.3
CDK2-212ENST00000556656 FGD5Q6ZNL6 1462 aa16.93■□□□□ 0.3
CDK2-212ENST00000556656 ARHGEF11O15085 1522 aa16.91■□□□□ 0.3
CDK2-212ENST00000556656 TDRD9Q8NDG6 1382 aaKnown RBP16.91■□□□□ 0.3
CDK2-212ENST00000556656 SOGA1O94964 1423 aa16.89■□□□□ 0.29
CDK2-212ENST00000556656 FBLN2P98095 1184 aa16.89■□□□□ 0.29
CDK2-212ENST00000556656 SNAPC4Q5SXM2 1469 aa16.84■□□□□ 0.29
CDK2-212ENST00000556656 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
CDK2-212ENST00000556656 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
CDK2-212ENST00000556656 CYB5RLQ6IPT4 315 aa16.78■□□□□ 0.28
CDK2-212ENST00000556656 ARAP1Q96P48 1450 aa16.78■□□□□ 0.28
CDK2-212ENST00000556656 CLASP1Q7Z460 1538 aa16.73■□□□□ 0.27
CDK2-212ENST00000556656 GRIN2BQ13224 1484 aa16.73■□□□□ 0.27
CDK2-212ENST00000556656 ABCA5Q8WWZ7 1642 aa16.7■□□□□ 0.26
CDK2-212ENST00000556656 GAPVD1Q14C86 1478 aa16.7■□□□□ 0.26
CDK2-212ENST00000556656 MAGI1Q96QZ7 1491 aaPredicted RBP16.7■□□□□ 0.26
CDK2-212ENST00000556656 CHMP7Q8WUX9 453 aaPredicted RBP16.69■□□□□ 0.26
CDK2-212ENST00000556656 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
CDK2-212ENST00000556656 SYNJ2O15056 1496 aa16.67■□□□□ 0.26
CDK2-212ENST00000556656 ABCA10Q8WWZ4 1543 aa16.67■□□□□ 0.26
CDK2-212ENST00000556656 BIVM-ERCC5R4GMW8 1640 aa16.64■□□□□ 0.25
CDK2-212ENST00000556656 TOP2BQ02880 1626 aa16.62■□□□□ 0.25
CDK2-212ENST00000556656 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.25
CDK2-212ENST00000556656 ADAMTS12P58397 1594 aa16.59■□□□□ 0.25
CDK2-212ENST00000556656 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
CDK2-212ENST00000556656 ERCC6L2Q5T890 1561 aa16.58■□□□□ 0.24
CDK2-212ENST00000556656 CEP170Q5SW79 1584 aa16.55■□□□□ 0.24
CDK2-212ENST00000556656 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
CDK2-212ENST00000556656 NUP160Q12769 1436 aa16.46■□□□□ 0.23
CDK2-212ENST00000556656 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
CDK2-212ENST00000556656 ERICH3Q5RHP9 1530 aa16.44■□□□□ 0.22
CDK2-212ENST00000556656 SHROOM2Q13796 1616 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms