RNA–Protein interactions for RNA: ENST00000556567.5

TTC8-213, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 2

Gene TTC8, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-213ENST00000556567 NISCHQ9Y2I1 1504 aa31.92■■■□□ 2.7
TTC8-213ENST00000556567 ABCC9O60706 1549 aa29.29■■■□□ 2.28
TTC8-213ENST00000556567 CCDC180Q9P1Z9 1646 aa28.76■■■□□ 2.19
TTC8-213ENST00000556567 AEBP2Q6ZN18 517 aaPredicted RBP28.39■■■□□ 2.14
TTC8-213ENST00000556567 DNAJC5BQ9UF47 199 aa28.07■■■□□ 2.08
TTC8-213ENST00000556567 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
TTC8-213ENST00000556567 NACADO15069 1562 aa27.33■■□□□ 1.97
TTC8-213ENST00000556567 PABPN1Q86U42 306 aaKnown RBP eCLIP27.23■■□□□ 1.95
TTC8-213ENST00000556567 UNC13AQ9UPW8 1703 aa27.03■■□□□ 1.92
TTC8-213ENST00000556567 DCAF8L2P0C7V8 631 aa27.01■■□□□ 1.91
TTC8-213ENST00000556567 BICRAQ9NZM4 1560 aa26.98■■□□□ 1.91
TTC8-213ENST00000556567 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
TTC8-213ENST00000556567 MYO15BQ96JP2 1530 aa26.85■■□□□ 1.89
TTC8-213ENST00000556567 CC2D2AQ9P2K1 1620 aa26.43■■□□□ 1.82
TTC8-213ENST00000556567 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
TTC8-213ENST00000556567 SHROOM4Q9ULL8 1493 aa26.42■■□□□ 1.82
TTC8-213ENST00000556567 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
TTC8-213ENST00000556567 DCAF1Q9Y4B6 1507 aa26.33■■□□□ 1.81
TTC8-213ENST00000556567 EIF4G1Q04637 1599 aaKnown RBP26.27■■□□□ 1.8
TTC8-213ENST00000556567 SCRIBQ14160 1630 aa26.21■■□□□ 1.79
TTC8-213ENST00000556567 DNAJC5Q9H3Z4 198 aa26.01■■□□□ 1.75
TTC8-213ENST00000556567 CUX2O14529 1486 aa25.4■■□□□ 1.66
TTC8-213ENST00000556567 NCAPD3P42695 1498 aa25.32■■□□□ 1.64
TTC8-213ENST00000556567 ERCC6Q03468 1493 aa25.21■■□□□ 1.63
TTC8-213ENST00000556567 ATAD2BQ9ULI0 1458 aa25.16■■□□□ 1.62
TTC8-213ENST00000556567 NESP48681 1621 aa25.08■■□□□ 1.61
TTC8-213ENST00000556567 HMGXB3Q12766 1538 aa25.03■■□□□ 1.6
TTC8-213ENST00000556567 SMARCA4P51532 1647 aa24.97■■□□□ 1.59
TTC8-213ENST00000556567 SMARCA2P51531 1590 aa24.97■■□□□ 1.59
TTC8-213ENST00000556567 THOC2Q8NI27 1593 aaKnown RBP24.89■■□□□ 1.58
TTC8-213ENST00000556567 BAZ1BQ9UIG0 1483 aaKnown RBP24.81■■□□□ 1.56
TTC8-213ENST00000556567 PEG3Q9GZU2 1588 aa24.78■■□□□ 1.56
TTC8-213ENST00000556567 BAZ1AQ9NRL2 1556 aaPredicted RBP24.74■■□□□ 1.55
TTC8-213ENST00000556567 LAMC3Q9Y6N6 1575 aa24.73■■□□□ 1.55
TTC8-213ENST00000556567 KIF21AQ7Z4S6 1674 aa24.66■■□□□ 1.54
TTC8-213ENST00000556567 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
TTC8-213ENST00000556567 PDS5BQ9NTI5 1447 aa24.59■■□□□ 1.53
TTC8-213ENST00000556567 TRIM41Q8WV44 630 aa24.56■■□□□ 1.52
TTC8-213ENST00000556567 CADPSQ9ULU8 1353 aa24.49■■□□□ 1.51
TTC8-213ENST00000556567 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.5
TTC8-213ENST00000556567 WDR62O43379 1518 aa24.44■■□□□ 1.5
TTC8-213ENST00000556567 WIZO95785 1651 aa24.26■■□□□ 1.47
TTC8-213ENST00000556567 CEP164Q9UPV0 1460 aa24.21■■□□□ 1.47
TTC8-213ENST00000556567 SENP3Q9H4L4 574 aaPredicted RBP24.21■■□□□ 1.47
TTC8-213ENST00000556567 FANCD2Q9BXW9 1451 aa24.19■■□□□ 1.46
TTC8-213ENST00000556567 OSCARQ8IYS5 282 aa24.15■■□□□ 1.46
TTC8-213ENST00000556567 CFTRP13569 1480 aa24.13■■□□□ 1.45
TTC8-213ENST00000556567 URB2Q14146 1524 aaKnown RBP24.09■■□□□ 1.45
TTC8-213ENST00000556567 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
TTC8-213ENST00000556567 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
TTC8-213ENST00000556567 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
TTC8-213ENST00000556567 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
TTC8-213ENST00000556567 PHF23Q9BUL5 403 aaPredicted RBP23.9■■□□□ 1.42
TTC8-213ENST00000556567 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.42
TTC8-213ENST00000556567 ZNF608Q9ULD9 1512 aaPredicted RBP23.87■■□□□ 1.41
TTC8-213ENST00000556567 ARHGEF11O15085 1522 aa23.82■■□□□ 1.4
TTC8-213ENST00000556567 IFT140Q96RY7 1462 aa23.77■■□□□ 1.4
TTC8-213ENST00000556567 PRDM2Q13029 1718 aa23.7■■□□□ 1.39
TTC8-213ENST00000556567 TOPBP1Q92547 1522 aa23.69■■□□□ 1.38
TTC8-213ENST00000556567 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
TTC8-213ENST00000556567 EIF4G3O43432 1585 aaKnown RBP23.64■■□□□ 1.37
TTC8-213ENST00000556567 CYB5RLQ6IPT4 315 aa23.63■■□□□ 1.37
TTC8-213ENST00000556567 ARAP1Q96P48 1450 aa23.59■■□□□ 1.37
TTC8-213ENST00000556567 AQRO60306 1485 aaKnown RBP eCLIP23.57■■□□□ 1.36
TTC8-213ENST00000556567 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
TTC8-213ENST00000556567 DNMBPQ6XZF7 1577 aa23.53■■□□□ 1.36
TTC8-213ENST00000556567 CHD1O14646 1710 aa23.52■■□□□ 1.36
TTC8-213ENST00000556567 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
TTC8-213ENST00000556567 POLA1P09884 1462 aaPredicted RBP23.44■■□□□ 1.34
TTC8-213ENST00000556567 TRHP20396 242 aaPredicted RBP23.44■■□□□ 1.34
TTC8-213ENST00000556567 RAD54L2Q9Y4B4 1467 aa23.38■■□□□ 1.33
TTC8-213ENST00000556567 FBLN2P98095 1184 aa23.37■■□□□ 1.33
TTC8-213ENST00000556567 TDRD9Q8NDG6 1382 aaKnown RBP23.34■■□□□ 1.33
TTC8-213ENST00000556567 CLASP1Q7Z460 1538 aa23.33■■□□□ 1.32
TTC8-213ENST00000556567 SOGA1O94964 1423 aa23.28■■□□□ 1.32
TTC8-213ENST00000556567 SNAPC4Q5SXM2 1469 aa23.28■■□□□ 1.32
TTC8-213ENST00000556567 FGD5Q6ZNL6 1462 aa23.2■■□□□ 1.3
TTC8-213ENST00000556567 WDR97A6NE52 1622 aa23.17■■□□□ 1.3
TTC8-213ENST00000556567 MAGI1Q96QZ7 1491 aaPredicted RBP23.17■■□□□ 1.3
TTC8-213ENST00000556567 CUX1P39880 1505 aa23.15■■□□□ 1.3
TTC8-213ENST00000556567 SYNJ1O43426 1573 aa23.14■■□□□ 1.3
TTC8-213ENST00000556567 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
TTC8-213ENST00000556567 SYNJ2O15056 1496 aa23.11■■□□□ 1.29
TTC8-213ENST00000556567 GRIN2BQ13224 1484 aa23.11■■□□□ 1.29
TTC8-213ENST00000556567 GAPVD1Q14C86 1478 aa23.06■■□□□ 1.28
TTC8-213ENST00000556567 ERCC6L2Q5T890 1561 aa22.97■■□□□ 1.27
TTC8-213ENST00000556567 PBRM1Q86U86 1689 aa22.96■■□□□ 1.27
TTC8-213ENST00000556567 ABCA5Q8WWZ7 1642 aa22.93■■□□□ 1.26
TTC8-213ENST00000556567 ABCA10Q8WWZ4 1543 aa22.92■■□□□ 1.26
TTC8-213ENST00000556567 GRIN2AQ12879 1464 aa22.85■■□□□ 1.25
TTC8-213ENST00000556567 NUP160Q12769 1436 aa22.84■■□□□ 1.25
TTC8-213ENST00000556567 CEP170Q5SW79 1584 aa22.82■■□□□ 1.24
TTC8-213ENST00000556567 ADAMTS12P58397 1594 aa22.78■■□□□ 1.24
TTC8-213ENST00000556567 SHROOM2Q13796 1616 aa22.77■■□□□ 1.24
TTC8-213ENST00000556567 KIF13AQ9H1H9 1805 aa22.69■■□□□ 1.22
TTC8-213ENST00000556567 WRNQ14191 1432 aaPredicted RBP eCLIP22.68■■□□□ 1.22
TTC8-213ENST00000556567 FHAD1B1AJZ9 1412 aa22.67■■□□□ 1.22
TTC8-213ENST00000556567 PRG4Q92954 1404 aaPredicted RBP22.6■■□□□ 1.21
TTC8-213ENST00000556567 TOP2BQ02880 1626 aa22.6■■□□□ 1.21
TTC8-213ENST00000556567 BIVM-ERCC5R4GMW8 1640 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms