RNA–Protein interactions for RNA: ENST00000555808.1

TIMELESS-204, Transcript of timeless circadian regulator, humanhuman

TSL 3

Gene TIMELESS, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-204ENST00000555808 NISCHQ9Y2I1 1504 aa19.48■□□□□ 0.71
TIMELESS-204ENST00000555808 ABCC9O60706 1549 aa18.02■□□□□ 0.47
TIMELESS-204ENST00000555808 CCDC180Q9P1Z9 1646 aa17.8■□□□□ 0.44
TIMELESS-204ENST00000555808 DNAJC5BQ9UF47 199 aa17.16■□□□□ 0.34
TIMELESS-204ENST00000555808 RB1CC1Q8TDY2 1594 aa17.05■□□□□ 0.32
TIMELESS-204ENST00000555808 UNC13AQ9UPW8 1703 aa16.86■□□□□ 0.29
TIMELESS-204ENST00000555808 NACADO15069 1562 aa16.81■□□□□ 0.28
TIMELESS-204ENST00000555808 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
TIMELESS-204ENST00000555808 PABPN1Q86U42 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
TIMELESS-204ENST00000555808 BICRAQ9NZM4 1560 aa16.57■□□□□ 0.24
TIMELESS-204ENST00000555808 DCAF8L2P0C7V8 631 aa16.51■□□□□ 0.23
TIMELESS-204ENST00000555808 MYO15BQ96JP2 1530 aa16.42■□□□□ 0.22
TIMELESS-204ENST00000555808 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
TIMELESS-204ENST00000555808 DNAJC5Q9H3Z4 198 aa16.32■□□□□ 0.2
TIMELESS-204ENST00000555808 CECR2Q9BXF3 1484 aa16.26■□□□□ 0.19
TIMELESS-204ENST00000555808 SHROOM4Q9ULL8 1493 aa16.26■□□□□ 0.19
TIMELESS-204ENST00000555808 EIF4G1Q04637 1599 aaKnown RBP16.18■□□□□ 0.18
TIMELESS-204ENST00000555808 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
TIMELESS-204ENST00000555808 DCAF1Q9Y4B6 1507 aa16.08■□□□□ 0.16
TIMELESS-204ENST00000555808 ZCCHC6Q5VYS8 1495 aaKnown RBP16.07■□□□□ 0.16
TIMELESS-204ENST00000555808 CUX2O14529 1486 aa15.7■□□□□ 0.1
TIMELESS-204ENST00000555808 ERCC6Q03468 1493 aa15.58■□□□□ 0.08
TIMELESS-204ENST00000555808 CHIC1Q5VXU3 224 aa15.55■□□□□ 0.08
TIMELESS-204ENST00000555808 NCAPD3P42695 1498 aa15.46■□□□□ 0.06
TIMELESS-204ENST00000555808 THOC2Q8NI27 1593 aaKnown RBP15.39■□□□□ 0.05
TIMELESS-204ENST00000555808 NESP48681 1621 aa15.38■□□□□ 0.05
TIMELESS-204ENST00000555808 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
TIMELESS-204ENST00000555808 ATAD2BQ9ULI0 1458 aa15.36■□□□□ 0.05
TIMELESS-204ENST00000555808 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
TIMELESS-204ENST00000555808 SMARCA4P51532 1647 aa15.35■□□□□ 0.05
TIMELESS-204ENST00000555808 KIF21AQ7Z4S6 1674 aa15.33■□□□□ 0.04
TIMELESS-204ENST00000555808 LAMC3Q9Y6N6 1575 aa15.27■□□□□ 0.03
TIMELESS-204ENST00000555808 BAZ1BQ9UIG0 1483 aaKnown RBP15.22■□□□□ 0.03
TIMELESS-204ENST00000555808 TRIM41Q8WV44 630 aa15.2■□□□□ 0.02
TIMELESS-204ENST00000555808 PEG3Q9GZU2 1588 aa15.18■□□□□ 0.02
TIMELESS-204ENST00000555808 BAZ1AQ9NRL2 1556 aaPredicted RBP15.18■□□□□ 0.02
TIMELESS-204ENST00000555808 PDS5BQ9NTI5 1447 aa15.09■□□□□ 0.01
TIMELESS-204ENST00000555808 WDR62O43379 1518 aa15.03■□□□□ -0
TIMELESS-204ENST00000555808 MRC2Q9UBG0 1479 aa15.02■□□□□ -0
TIMELESS-204ENST00000555808 MROH2BQ7Z745 1585 aa15.01□□□□□ -0.01
TIMELESS-204ENST00000555808 CADPSQ9ULU8 1353 aa14.94□□□□□ -0.02
TIMELESS-204ENST00000555808 CEP164Q9UPV0 1460 aa14.9□□□□□ -0.02
TIMELESS-204ENST00000555808 WIZO95785 1651 aa14.9□□□□□ -0.02
TIMELESS-204ENST00000555808 RIMBP3CA6NJZ7 1639 aa14.85□□□□□ -0.03
TIMELESS-204ENST00000555808 RIMBP3BA6NNM3 1639 aa14.85□□□□□ -0.03
TIMELESS-204ENST00000555808 RIMBP3Q9UFD9 1639 aa14.85□□□□□ -0.03
TIMELESS-204ENST00000555808 PRDM2Q13029 1718 aa14.83□□□□□ -0.03
TIMELESS-204ENST00000555808 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
TIMELESS-204ENST00000555808 FANCD2Q9BXW9 1451 aa14.82□□□□□ -0.04
TIMELESS-204ENST00000555808 URB2Q14146 1524 aaKnown RBP14.74□□□□□ -0.05
TIMELESS-204ENST00000555808 CFTRP13569 1480 aa14.72□□□□□ -0.05
TIMELESS-204ENST00000555808 ARHGEF11O15085 1522 aa14.69□□□□□ -0.06
TIMELESS-204ENST00000555808 CHD1O14646 1710 aa14.66□□□□□ -0.06
TIMELESS-204ENST00000555808 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
TIMELESS-204ENST00000555808 EIF4G3O43432 1585 aaKnown RBP14.61□□□□□ -0.07
TIMELESS-204ENST00000555808 ZNF608Q9ULD9 1512 aaPredicted RBP14.6□□□□□ -0.07
TIMELESS-204ENST00000555808 IFT140Q96RY7 1462 aa14.58□□□□□ -0.08
TIMELESS-204ENST00000555808 TOPBP1Q92547 1522 aa14.51□□□□□ -0.09
TIMELESS-204ENST00000555808 CYB5RLQ6IPT4 315 aa14.51□□□□□ -0.09
TIMELESS-204ENST00000555808 ARAP1Q96P48 1450 aa14.5□□□□□ -0.09
TIMELESS-204ENST00000555808 RSF1Q96T23 1441 aaPredicted RBP14.5□□□□□ -0.09
TIMELESS-204ENST00000555808 TRHP20396 242 aaPredicted RBP14.5□□□□□ -0.09
TIMELESS-204ENST00000555808 TARBP1Q13395 1621 aaKnown RBP14.49□□□□□ -0.09
TIMELESS-204ENST00000555808 DNMBPQ6XZF7 1577 aa14.47□□□□□ -0.09
TIMELESS-204ENST00000555808 ABCC8Q09428 1581 aa14.46□□□□□ -0.09
TIMELESS-204ENST00000555808 CCDC88BA6NC98 1476 aa14.41□□□□□ -0.1
TIMELESS-204ENST00000555808 AQRO60306 1485 aaKnown RBP eCLIP14.4□□□□□ -0.1
TIMELESS-204ENST00000555808 POTEDQ86YR6 584 aa14.38□□□□□ -0.11
TIMELESS-204ENST00000555808 SENP3Q9H4L4 574 aaPredicted RBP14.36□□□□□ -0.11
TIMELESS-204ENST00000555808 CLASP1Q7Z460 1538 aa14.36□□□□□ -0.11
TIMELESS-204ENST00000555808 FBLN2P98095 1184 aa14.35□□□□□ -0.11
TIMELESS-204ENST00000555808 POLA1P09884 1462 aaPredicted RBP14.33□□□□□ -0.12
TIMELESS-204ENST00000555808 SYNJ1O43426 1573 aa14.32□□□□□ -0.12
TIMELESS-204ENST00000555808 WDR97A6NE52 1622 aa14.32□□□□□ -0.12
TIMELESS-204ENST00000555808 PBRM1Q86U86 1689 aa14.29□□□□□ -0.12
TIMELESS-204ENST00000555808 SNAPC4Q5SXM2 1469 aa14.28□□□□□ -0.12
TIMELESS-204ENST00000555808 RAD54L2Q9Y4B4 1467 aa14.27□□□□□ -0.12
TIMELESS-204ENST00000555808 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
TIMELESS-204ENST00000555808 MAGI1Q96QZ7 1491 aaPredicted RBP14.22□□□□□ -0.13
TIMELESS-204ENST00000555808 SOGA1O94964 1423 aa14.22□□□□□ -0.13
TIMELESS-204ENST00000555808 FGD5Q6ZNL6 1462 aa14.2□□□□□ -0.14
TIMELESS-204ENST00000555808 ILDR1Q86SU0 546 aaPredicted RBP14.18□□□□□ -0.14
TIMELESS-204ENST00000555808 CHMP7Q8WUX9 453 aaPredicted RBP14.18□□□□□ -0.14
TIMELESS-204ENST00000555808 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
TIMELESS-204ENST00000555808 GAPVD1Q14C86 1478 aa14.18□□□□□ -0.14
TIMELESS-204ENST00000555808 KIF13AQ9H1H9 1805 aa14.18□□□□□ -0.14
TIMELESS-204ENST00000555808 GRIN2BQ13224 1484 aa14.17□□□□□ -0.14
TIMELESS-204ENST00000555808 CUX1P39880 1505 aa14.13□□□□□ -0.15
TIMELESS-204ENST00000555808 ABCA5Q8WWZ7 1642 aa14.11□□□□□ -0.15
TIMELESS-204ENST00000555808 ERCC6L2Q5T890 1561 aa14.09□□□□□ -0.15
TIMELESS-204ENST00000555808 PHF23Q9BUL5 403 aaPredicted RBP14.05□□□□□ -0.16
TIMELESS-204ENST00000555808 CEP170Q5SW79 1584 aa14.04□□□□□ -0.16
TIMELESS-204ENST00000555808 SHROOM2Q13796 1616 aa14.04□□□□□ -0.16
TIMELESS-204ENST00000555808 ADAMTS12P58397 1594 aa14.01□□□□□ -0.17
TIMELESS-204ENST00000555808 GRIN2AQ12879 1464 aa14□□□□□ -0.17
TIMELESS-204ENST00000555808 ABCA10Q8WWZ4 1543 aa14□□□□□ -0.17
TIMELESS-204ENST00000555808 NUP160Q12769 1436 aa13.94□□□□□ -0.18
TIMELESS-204ENST00000555808 TSPOAP1O95153 1857 aa13.93□□□□□ -0.18
TIMELESS-204ENST00000555808 BIVM-ERCC5R4GMW8 1640 aa13.91□□□□□ -0.18
TIMELESS-204ENST00000555808 DIP2BQ9P265 1576 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms