RNA–Protein interactions for RNA: ENST00000555314.1

TMEM253-205, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-205ENST00000555314 NISCHQ9Y2I1 1504 aa31.65■■■□□ 2.66
TMEM253-205ENST00000555314 ABCC9O60706 1549 aa28.62■■■□□ 2.17
TMEM253-205ENST00000555314 CCDC180Q9P1Z9 1646 aa28.43■■■□□ 2.14
TMEM253-205ENST00000555314 RB1CC1Q8TDY2 1594 aa27.21■■□□□ 1.95
TMEM253-205ENST00000555314 DNAJC5BQ9UF47 199 aa27.09■■□□□ 1.93
TMEM253-205ENST00000555314 NACADO15069 1562 aa27.02■■□□□ 1.92
TMEM253-205ENST00000555314 DCAF8L2P0C7V8 631 aa26.72■■□□□ 1.87
TMEM253-205ENST00000555314 MYO15BQ96JP2 1530 aa26.69■■□□□ 1.86
TMEM253-205ENST00000555314 PABPN1Q86U42 306 aaKnown RBP eCLIP26.63■■□□□ 1.85
TMEM253-205ENST00000555314 BICRAQ9NZM4 1560 aa26.37■■□□□ 1.81
TMEM253-205ENST00000555314 UNC13AQ9UPW8 1703 aa26.36■■□□□ 1.81
TMEM253-205ENST00000555314 DCAF1Q9Y4B6 1507 aa26.22■■□□□ 1.79
TMEM253-205ENST00000555314 SHROOM4Q9ULL8 1493 aa26.2■■□□□ 1.78
TMEM253-205ENST00000555314 ZCCHC6Q5VYS8 1495 aaKnown RBP26.17■■□□□ 1.78
TMEM253-205ENST00000555314 CECR2Q9BXF3 1484 aa25.87■■□□□ 1.73
TMEM253-205ENST00000555314 CC2D2AQ9P2K1 1620 aa25.82■■□□□ 1.72
TMEM253-205ENST00000555314 SCRIBQ14160 1630 aa25.79■■□□□ 1.72
TMEM253-205ENST00000555314 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
TMEM253-205ENST00000555314 EIF4G1Q04637 1599 aaKnown RBP25.76■■□□□ 1.71
TMEM253-205ENST00000555314 AEBP2Q6ZN18 517 aaPredicted RBP25.56■■□□□ 1.68
TMEM253-205ENST00000555314 DNAJC5Q9H3Z4 198 aa25.14■■□□□ 1.62
TMEM253-205ENST00000555314 NCAPD3P42695 1498 aa25.01■■□□□ 1.59
TMEM253-205ENST00000555314 CUX2O14529 1486 aa24.88■■□□□ 1.57
TMEM253-205ENST00000555314 ATAD2BQ9ULI0 1458 aa24.83■■□□□ 1.56
TMEM253-205ENST00000555314 ERCC6Q03468 1493 aa24.77■■□□□ 1.56
TMEM253-205ENST00000555314 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
TMEM253-205ENST00000555314 HMGXB3Q12766 1538 aa24.73■■□□□ 1.55
TMEM253-205ENST00000555314 SMARCA4P51532 1647 aa24.66■■□□□ 1.54
TMEM253-205ENST00000555314 BAZ1AQ9NRL2 1556 aaPredicted RBP24.58■■□□□ 1.52
TMEM253-205ENST00000555314 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
TMEM253-205ENST00000555314 PEG3Q9GZU2 1588 aa24.53■■□□□ 1.52
TMEM253-205ENST00000555314 NESP48681 1621 aa24.5■■□□□ 1.51
TMEM253-205ENST00000555314 LAMC3Q9Y6N6 1575 aa24.38■■□□□ 1.49
TMEM253-205ENST00000555314 PDS5BQ9NTI5 1447 aa24.32■■□□□ 1.48
TMEM253-205ENST00000555314 MROH2BQ7Z745 1585 aa24.32■■□□□ 1.48
TMEM253-205ENST00000555314 THOC2Q8NI27 1593 aaKnown RBP24.29■■□□□ 1.48
TMEM253-205ENST00000555314 CADPSQ9ULU8 1353 aa24.21■■□□□ 1.47
TMEM253-205ENST00000555314 KIF21AQ7Z4S6 1674 aa24.08■■□□□ 1.44
TMEM253-205ENST00000555314 MRC2Q9UBG0 1479 aa24.07■■□□□ 1.44
TMEM253-205ENST00000555314 WDR62O43379 1518 aa24■■□□□ 1.43
TMEM253-205ENST00000555314 WIZO95785 1651 aa23.92■■□□□ 1.42
TMEM253-205ENST00000555314 CEP164Q9UPV0 1460 aa23.91■■□□□ 1.42
TMEM253-205ENST00000555314 CFTRP13569 1480 aa23.88■■□□□ 1.41
TMEM253-205ENST00000555314 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
TMEM253-205ENST00000555314 RSF1Q96T23 1441 aaPredicted RBP23.82■■□□□ 1.4
TMEM253-205ENST00000555314 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
TMEM253-205ENST00000555314 OSCARQ8IYS5 282 aa23.73■■□□□ 1.39
TMEM253-205ENST00000555314 TOP2AP11388 1531 aaKnown RBP23.73■■□□□ 1.39
TMEM253-205ENST00000555314 URB2Q14146 1524 aaKnown RBP23.65■■□□□ 1.38
TMEM253-205ENST00000555314 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
TMEM253-205ENST00000555314 CCDC88BA6NC98 1476 aa23.47■■□□□ 1.35
TMEM253-205ENST00000555314 ABCC8Q09428 1581 aa23.42■■□□□ 1.34
TMEM253-205ENST00000555314 PRDM2Q13029 1718 aa23.39■■□□□ 1.33
TMEM253-205ENST00000555314 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
TMEM253-205ENST00000555314 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
TMEM253-205ENST00000555314 RIMBP3CA6NJZ7 1639 aa23.26■■□□□ 1.31
TMEM253-205ENST00000555314 RIMBP3BA6NNM3 1639 aa23.26■■□□□ 1.31
TMEM253-205ENST00000555314 RIMBP3Q9UFD9 1639 aa23.26■■□□□ 1.31
TMEM253-205ENST00000555314 DNMBPQ6XZF7 1577 aa23.26■■□□□ 1.31
TMEM253-205ENST00000555314 ARHGEF11O15085 1522 aa23.25■■□□□ 1.31
TMEM253-205ENST00000555314 EIF4G3O43432 1585 aaKnown RBP23.19■■□□□ 1.3
TMEM253-205ENST00000555314 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.3
TMEM253-205ENST00000555314 TARBP1Q13395 1621 aaKnown RBP23.15■■□□□ 1.3
TMEM253-205ENST00000555314 POLA1P09884 1462 aaPredicted RBP23.14■■□□□ 1.29
TMEM253-205ENST00000555314 CYB5RLQ6IPT4 315 aa23.12■■□□□ 1.29
TMEM253-205ENST00000555314 SOGA1O94964 1423 aa23.06■■□□□ 1.28
TMEM253-205ENST00000555314 FBLN2P98095 1184 aa23.04■■□□□ 1.28
TMEM253-205ENST00000555314 TDRD9Q8NDG6 1382 aaKnown RBP23.01■■□□□ 1.27
TMEM253-205ENST00000555314 ARAP1Q96P48 1450 aa23■■□□□ 1.27
TMEM253-205ENST00000555314 RAD54L2Q9Y4B4 1467 aa23■■□□□ 1.27
TMEM253-205ENST00000555314 WDR97A6NE52 1622 aa23■■□□□ 1.27
TMEM253-205ENST00000555314 CHD1O14646 1710 aa22.96■■□□□ 1.27
TMEM253-205ENST00000555314 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
TMEM253-205ENST00000555314 MAGI1Q96QZ7 1491 aaPredicted RBP22.92■■□□□ 1.26
TMEM253-205ENST00000555314 CHMP7Q8WUX9 453 aaPredicted RBP22.91■■□□□ 1.26
TMEM253-205ENST00000555314 GRIN2BQ13224 1484 aa22.9■■□□□ 1.26
TMEM253-205ENST00000555314 SNAPC4Q5SXM2 1469 aa22.9■■□□□ 1.26
TMEM253-205ENST00000555314 TRHP20396 242 aaPredicted RBP22.89■■□□□ 1.25
TMEM253-205ENST00000555314 CUX1P39880 1505 aa22.86■■□□□ 1.25
TMEM253-205ENST00000555314 CLASP1Q7Z460 1538 aa22.86■■□□□ 1.25
TMEM253-205ENST00000555314 SYNJ2O15056 1496 aa22.84■■□□□ 1.25
TMEM253-205ENST00000555314 SYNJ1O43426 1573 aa22.83■■□□□ 1.25
TMEM253-205ENST00000555314 GAPVD1Q14C86 1478 aa22.75■■□□□ 1.23
TMEM253-205ENST00000555314 PHF23Q9BUL5 403 aaPredicted RBP22.73■■□□□ 1.23
TMEM253-205ENST00000555314 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
TMEM253-205ENST00000555314 WRNQ14191 1432 aaPredicted RBP eCLIP22.63■■□□□ 1.21
TMEM253-205ENST00000555314 ABCA5Q8WWZ7 1642 aa22.62■■□□□ 1.21
TMEM253-205ENST00000555314 PBRM1Q86U86 1689 aa22.58■■□□□ 1.2
TMEM253-205ENST00000555314 GRIN2AQ12879 1464 aa22.57■■□□□ 1.2
TMEM253-205ENST00000555314 NUP160Q12769 1436 aa22.55■■□□□ 1.2
TMEM253-205ENST00000555314 FHAD1B1AJZ9 1412 aa22.5■■□□□ 1.19
TMEM253-205ENST00000555314 SUPT5HO00267 1087 aaKnown RBP22.5■■□□□ 1.19
TMEM253-205ENST00000555314 ADAMTS12P58397 1594 aa22.46■■□□□ 1.19
TMEM253-205ENST00000555314 TOP2BQ02880 1626 aa22.45■■□□□ 1.18
TMEM253-205ENST00000555314 ERICH3Q5RHP9 1530 aa22.43■■□□□ 1.18
TMEM253-205ENST00000555314 CEP170Q5SW79 1584 aa22.42■■□□□ 1.18
TMEM253-205ENST00000555314 BIVM-ERCC5R4GMW8 1640 aa22.41■■□□□ 1.18
TMEM253-205ENST00000555314 ERCC6L2Q5T890 1561 aa22.39■■□□□ 1.18
TMEM253-205ENST00000555314 SHROOM2Q13796 1616 aa22.39■■□□□ 1.17
TMEM253-205ENST00000555314 JPH4Q96JJ6 628 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms