RNA–Protein interactions for RNA: ENST00000551901.5

RRN3P1-204, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 1, humanhuman

BASIC

Gene RRN3P1, Length 1,157 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P1-204ENST00000551901 NISCHQ9Y2I1 1504 aa25.64■■□□□ 1.7
RRN3P1-204ENST00000551901 CCDC180Q9P1Z9 1646 aa22.85■■□□□ 1.25
RRN3P1-204ENST00000551901 ABCC9O60706 1549 aa22.46■■□□□ 1.19
RRN3P1-204ENST00000551901 RB1CC1Q8TDY2 1594 aa21.55■■□□□ 1.04
RRN3P1-204ENST00000551901 NACADO15069 1562 aa21.52■■□□□ 1.04
RRN3P1-204ENST00000551901 DCAF8L2P0C7V8 631 aa21.4■■□□□ 1.02
RRN3P1-204ENST00000551901 MYO15BQ96JP2 1530 aa21.38■■□□□ 1.01
RRN3P1-204ENST00000551901 ZCCHC6Q5VYS8 1495 aaKnown RBP21.32■■□□□ 1
RRN3P1-204ENST00000551901 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
RRN3P1-204ENST00000551901 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
RRN3P1-204ENST00000551901 UNC13AQ9UPW8 1703 aa21.11■□□□□ 0.97
RRN3P1-204ENST00000551901 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
RRN3P1-204ENST00000551901 BICRAQ9NZM4 1560 aa20.97■□□□□ 0.95
RRN3P1-204ENST00000551901 DNAJC5BQ9UF47 199 aa20.82■□□□□ 0.92
RRN3P1-204ENST00000551901 AEBP2Q6ZN18 517 aaPredicted RBP20.81■□□□□ 0.92
RRN3P1-204ENST00000551901 SCRIBQ14160 1630 aa20.79■□□□□ 0.92
RRN3P1-204ENST00000551901 SHROOM4Q9ULL8 1493 aa20.69■□□□□ 0.9
RRN3P1-204ENST00000551901 EIF4G1Q04637 1599 aaKnown RBP20.38■□□□□ 0.85
RRN3P1-204ENST00000551901 CC2D2AQ9P2K1 1620 aa20.33■□□□□ 0.84
RRN3P1-204ENST00000551901 CECR2Q9BXF3 1484 aa20.2■□□□□ 0.82
RRN3P1-204ENST00000551901 SMARCA4P51532 1647 aa19.91■□□□□ 0.78
RRN3P1-204ENST00000551901 NCAPD3P42695 1498 aa19.88■□□□□ 0.77
RRN3P1-204ENST00000551901 BAZ1AQ9NRL2 1556 aaPredicted RBP19.86■□□□□ 0.77
RRN3P1-204ENST00000551901 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
RRN3P1-204ENST00000551901 SMARCA2P51531 1590 aa19.79■□□□□ 0.76
RRN3P1-204ENST00000551901 MROH2BQ7Z745 1585 aa19.76■□□□□ 0.75
RRN3P1-204ENST00000551901 PEG3Q9GZU2 1588 aa19.76■□□□□ 0.75
RRN3P1-204ENST00000551901 HMGXB3Q12766 1538 aa19.74■□□□□ 0.75
RRN3P1-204ENST00000551901 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.73
RRN3P1-204ENST00000551901 WIZO95785 1651 aa19.53■□□□□ 0.72
RRN3P1-204ENST00000551901 RSF1Q96T23 1441 aaPredicted RBP19.49■□□□□ 0.71
RRN3P1-204ENST00000551901 NESP48681 1621 aa19.42■□□□□ 0.7
RRN3P1-204ENST00000551901 LAMC3Q9Y6N6 1575 aa19.35■□□□□ 0.69
RRN3P1-204ENST00000551901 ERCC6Q03468 1493 aa19.33■□□□□ 0.68
RRN3P1-204ENST00000551901 TOP2AP11388 1531 aaKnown RBP19.3■□□□□ 0.68
RRN3P1-204ENST00000551901 CADPSQ9ULU8 1353 aa19.27■□□□□ 0.68
RRN3P1-204ENST00000551901 CUX2O14529 1486 aa19.22■□□□□ 0.67
RRN3P1-204ENST00000551901 PDS5BQ9NTI5 1447 aa19.2■□□□□ 0.66
RRN3P1-204ENST00000551901 KIF21AQ7Z4S6 1674 aa19.18■□□□□ 0.66
RRN3P1-204ENST00000551901 THOC2Q8NI27 1593 aaKnown RBP19.16■□□□□ 0.66
RRN3P1-204ENST00000551901 CFTRP13569 1480 aa19.14■□□□□ 0.65
RRN3P1-204ENST00000551901 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
RRN3P1-204ENST00000551901 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
RRN3P1-204ENST00000551901 MRC2Q9UBG0 1479 aa19.02■□□□□ 0.63
RRN3P1-204ENST00000551901 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
RRN3P1-204ENST00000551901 WDR62O43379 1518 aa18.98■□□□□ 0.63
RRN3P1-204ENST00000551901 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
RRN3P1-204ENST00000551901 URB2Q14146 1524 aaKnown RBP18.87■□□□□ 0.61
RRN3P1-204ENST00000551901 DNAJC5Q9H3Z4 198 aa18.84■□□□□ 0.61
RRN3P1-204ENST00000551901 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
RRN3P1-204ENST00000551901 TOPBP1Q92547 1522 aa18.72■□□□□ 0.59
RRN3P1-204ENST00000551901 ABCC8Q09428 1581 aa18.71■□□□□ 0.59
RRN3P1-204ENST00000551901 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
RRN3P1-204ENST00000551901 PHF23Q9BUL5 403 aaPredicted RBP18.64■□□□□ 0.57
RRN3P1-204ENST00000551901 IFT140Q96RY7 1462 aa18.63■□□□□ 0.57
RRN3P1-204ENST00000551901 ZNF608Q9ULD9 1512 aaPredicted RBP18.57■□□□□ 0.56
RRN3P1-204ENST00000551901 POLA1P09884 1462 aaPredicted RBP18.56■□□□□ 0.56
RRN3P1-204ENST00000551901 TARBP1Q13395 1621 aaKnown RBP18.55■□□□□ 0.56
RRN3P1-204ENST00000551901 CUX1P39880 1505 aa18.54■□□□□ 0.56
RRN3P1-204ENST00000551901 FGD5Q6ZNL6 1462 aa18.48■□□□□ 0.55
RRN3P1-204ENST00000551901 RAD54L2Q9Y4B4 1467 aa18.47■□□□□ 0.55
RRN3P1-204ENST00000551901 SOGA1O94964 1423 aa18.47■□□□□ 0.55
RRN3P1-204ENST00000551901 EIF4G3O43432 1585 aaKnown RBP18.47■□□□□ 0.55
RRN3P1-204ENST00000551901 AQRO60306 1485 aaKnown RBP eCLIP18.44■□□□□ 0.54
RRN3P1-204ENST00000551901 OSCARQ8IYS5 282 aa18.41■□□□□ 0.54
RRN3P1-204ENST00000551901 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
RRN3P1-204ENST00000551901 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
RRN3P1-204ENST00000551901 BIVM-ERCC5R4GMW8 1640 aa18.34■□□□□ 0.53
RRN3P1-204ENST00000551901 WRNQ14191 1432 aaPredicted RBP eCLIP18.34■□□□□ 0.53
RRN3P1-204ENST00000551901 TOP2BQ02880 1626 aa18.34■□□□□ 0.53
RRN3P1-204ENST00000551901 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
RRN3P1-204ENST00000551901 ABCA10Q8WWZ4 1543 aa18.31■□□□□ 0.52
RRN3P1-204ENST00000551901 CHD1O14646 1710 aa18.27■□□□□ 0.52
RRN3P1-204ENST00000551901 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
RRN3P1-204ENST00000551901 ABCA5Q8WWZ7 1642 aa18.25■□□□□ 0.51
RRN3P1-204ENST00000551901 GAPVD1Q14C86 1478 aa18.25■□□□□ 0.51
RRN3P1-204ENST00000551901 SNAPC4Q5SXM2 1469 aa18.24■□□□□ 0.51
RRN3P1-204ENST00000551901 MAGI1Q96QZ7 1491 aaPredicted RBP18.23■□□□□ 0.51
RRN3P1-204ENST00000551901 PBRM1Q86U86 1689 aa18.22■□□□□ 0.51
RRN3P1-204ENST00000551901 FBLN2P98095 1184 aa18.19■□□□□ 0.5
RRN3P1-204ENST00000551901 SYNJ2O15056 1496 aa18.16■□□□□ 0.5
RRN3P1-204ENST00000551901 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
RRN3P1-204ENST00000551901 RIMBP3CA6NJZ7 1639 aa18.12■□□□□ 0.49
RRN3P1-204ENST00000551901 RIMBP3BA6NNM3 1639 aa18.12■□□□□ 0.49
RRN3P1-204ENST00000551901 RIMBP3Q9UFD9 1639 aa18.12■□□□□ 0.49
RRN3P1-204ENST00000551901 ARHGEF11O15085 1522 aa18.11■□□□□ 0.49
RRN3P1-204ENST00000551901 CLASP1Q7Z460 1538 aa18.09■□□□□ 0.49
RRN3P1-204ENST00000551901 ERICH3Q5RHP9 1530 aa18.08■□□□□ 0.49
RRN3P1-204ENST00000551901 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
RRN3P1-204ENST00000551901 ADAMTS12P58397 1594 aa18.06■□□□□ 0.48
RRN3P1-204ENST00000551901 FHAD1B1AJZ9 1412 aa18.04■□□□□ 0.48
RRN3P1-204ENST00000551901 GRIN2AQ12879 1464 aa18.03■□□□□ 0.48
RRN3P1-204ENST00000551901 NUP160Q12769 1436 aa17.98■□□□□ 0.47
RRN3P1-204ENST00000551901 KIF27Q86VH2 1401 aa17.97■□□□□ 0.47
RRN3P1-204ENST00000551901 IGF1RP08069 1367 aa17.96■□□□□ 0.47
RRN3P1-204ENST00000551901 CEP170Q5SW79 1584 aa17.96■□□□□ 0.46
RRN3P1-204ENST00000551901 ARAP1Q96P48 1450 aa17.95■□□□□ 0.46
RRN3P1-204ENST00000551901 CYB5RLQ6IPT4 315 aa17.94■□□□□ 0.46
RRN3P1-204ENST00000551901 CUL7Q14999 1698 aa17.87■□□□□ 0.45
RRN3P1-204ENST00000551901 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms