RNA–Protein interactions for RNA: ENST00000551692.5

PACS2-211, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 2

Gene PACS2, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-211ENST00000551692 NISCHQ9Y2I1 1504 aa31.48■■■□□ 2.63
PACS2-211ENST00000551692 CCDC180Q9P1Z9 1646 aa28.05■■■□□ 2.08
PACS2-211ENST00000551692 ZCCHC6Q5VYS8 1495 aaKnown RBP26.51■■□□□ 1.83
PACS2-211ENST00000551692 DCAF1Q9Y4B6 1507 aa26.5■■□□□ 1.83
PACS2-211ENST00000551692 MYO15BQ96JP2 1530 aa26.38■■□□□ 1.81
PACS2-211ENST00000551692 NACADO15069 1562 aa25.92■■□□□ 1.74
PACS2-211ENST00000551692 ABCC9O60706 1549 aa25.7■■□□□ 1.7
PACS2-211ENST00000551692 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
PACS2-211ENST00000551692 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
PACS2-211ENST00000551692 SHROOM4Q9ULL8 1493 aa25.07■■□□□ 1.6
PACS2-211ENST00000551692 SCRIBQ14160 1630 aa25.01■■□□□ 1.59
PACS2-211ENST00000551692 BICRAQ9NZM4 1560 aa24.98■■□□□ 1.59
PACS2-211ENST00000551692 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
PACS2-211ENST00000551692 PEG3Q9GZU2 1588 aa24.39■■□□□ 1.5
PACS2-211ENST00000551692 BAZ1AQ9NRL2 1556 aaPredicted RBP24.34■■□□□ 1.49
PACS2-211ENST00000551692 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
PACS2-211ENST00000551692 CECR2Q9BXF3 1484 aa24.17■■□□□ 1.46
PACS2-211ENST00000551692 MROH2BQ7Z745 1585 aa24.14■■□□□ 1.46
PACS2-211ENST00000551692 RSF1Q96T23 1441 aaPredicted RBP24.13■■□□□ 1.45
PACS2-211ENST00000551692 EIF4G1Q04637 1599 aaKnown RBP24.06■■□□□ 1.44
PACS2-211ENST00000551692 WIZO95785 1651 aa23.96■■□□□ 1.43
PACS2-211ENST00000551692 SMARCA2P51531 1590 aa23.94■■□□□ 1.42
PACS2-211ENST00000551692 HMGXB3Q12766 1538 aa23.93■■□□□ 1.42
PACS2-211ENST00000551692 TOP2AP11388 1531 aaKnown RBP23.91■■□□□ 1.42
PACS2-211ENST00000551692 PABPN1Q86U42 306 aaKnown RBP eCLIP23.85■■□□□ 1.411e-6■■■■□ 24.5
PACS2-211ENST00000551692 ATAD2BQ9ULI0 1458 aa23.82■■□□□ 1.4
PACS2-211ENST00000551692 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
PACS2-211ENST00000551692 CC2D2AQ9P2K1 1620 aa23.71■■□□□ 1.39
PACS2-211ENST00000551692 PRDM2Q13029 1718 aa23.53■■□□□ 1.36
PACS2-211ENST00000551692 BAZ1BQ9UIG0 1483 aaKnown RBP23.51■■□□□ 1.35
PACS2-211ENST00000551692 CCDC88BA6NC98 1476 aa23.4■■□□□ 1.34
PACS2-211ENST00000551692 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
PACS2-211ENST00000551692 CFTRP13569 1480 aa23.16■■□□□ 1.3
PACS2-211ENST00000551692 LAMC3Q9Y6N6 1575 aa23.12■■□□□ 1.29
PACS2-211ENST00000551692 PPARGC1BQ86YN6 1023 aaKnown RBP23.09■■□□□ 1.29
PACS2-211ENST00000551692 BIVM-ERCC5R4GMW8 1640 aa22.98■■□□□ 1.27
PACS2-211ENST00000551692 CADPSQ9ULU8 1353 aa22.91■■□□□ 1.26
PACS2-211ENST00000551692 PELP1Q8IZL8 1130 aaKnown RBP22.89■■□□□ 1.26
PACS2-211ENST00000551692 TOP2BQ02880 1626 aa22.83■■□□□ 1.25
PACS2-211ENST00000551692 DNAJC5BQ9UF47 199 aa22.83■■□□□ 1.24
PACS2-211ENST00000551692 HRCP23327 699 aa22.76■■□□□ 1.23
PACS2-211ENST00000551692 KIF21AQ7Z4S6 1674 aa22.75■■□□□ 1.23
PACS2-211ENST00000551692 PCGF6Q9BYE7 350 aa22.72■■□□□ 1.23
PACS2-211ENST00000551692 SYNJ1O43426 1573 aa22.72■■□□□ 1.23
PACS2-211ENST00000551692 DNMBPQ6XZF7 1577 aa22.66■■□□□ 1.22
PACS2-211ENST00000551692 CUX1P39880 1505 aa22.65■■□□□ 1.22
PACS2-211ENST00000551692 WDR97A6NE52 1622 aa22.65■■□□□ 1.22
PACS2-211ENST00000551692 ABCC8Q09428 1581 aa22.64■■□□□ 1.21
PACS2-211ENST00000551692 FANCD2Q9BXW9 1451 aa22.63■■□□□ 1.21
PACS2-211ENST00000551692 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
PACS2-211ENST00000551692 NESP48681 1621 aa22.62■■□□□ 1.21
PACS2-211ENST00000551692 THOC2Q8NI27 1593 aaKnown RBP22.61■■□□□ 1.21
PACS2-211ENST00000551692 WRNQ14191 1432 aaPredicted RBP eCLIP22.59■■□□□ 1.21
PACS2-211ENST00000551692 PDS5BQ9NTI5 1447 aa22.58■■□□□ 1.21
PACS2-211ENST00000551692 WDR62O43379 1518 aa22.58■■□□□ 1.2
PACS2-211ENST00000551692 CEP164Q9UPV0 1460 aa22.53■■□□□ 1.2
PACS2-211ENST00000551692 URB2Q14146 1524 aaKnown RBP22.49■■□□□ 1.19
PACS2-211ENST00000551692 TOPBP1Q92547 1522 aa22.47■■□□□ 1.19
PACS2-211ENST00000551692 MRC2Q9UBG0 1479 aa22.44■■□□□ 1.18
PACS2-211ENST00000551692 TARBP1Q13395 1621 aaKnown RBP22.43■■□□□ 1.18
PACS2-211ENST00000551692 EEA1Q15075 1411 aa22.39■■□□□ 1.18
PACS2-211ENST00000551692 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
PACS2-211ENST00000551692 ABCA10Q8WWZ4 1543 aa22.35■■□□□ 1.17
PACS2-211ENST00000551692 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
PACS2-211ENST00000551692 POLA1P09884 1462 aaPredicted RBP22.3■■□□□ 1.16
PACS2-211ENST00000551692 KIF21BO75037 1637 aa22.28■■□□□ 1.16
PACS2-211ENST00000551692 SCAF1Q9H7N4 1312 aaKnown RBP22.24■■□□□ 1.15
PACS2-211ENST00000551692 CUX2O14529 1486 aa22.23■■□□□ 1.15
PACS2-211ENST00000551692 CUL7Q14999 1698 aa22.17■■□□□ 1.14
PACS2-211ENST00000551692 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
PACS2-211ENST00000551692 ERICH3Q5RHP9 1530 aa22.17■■□□□ 1.14
PACS2-211ENST00000551692 IFT140Q96RY7 1462 aa22.15■■□□□ 1.14
PACS2-211ENST00000551692 TRIM41Q8WV44 630 aa22.12■■□□□ 1.13
PACS2-211ENST00000551692 PRXQ9BXM0 1461 aa22.09■■□□□ 1.13
PACS2-211ENST00000551692 SOGA1O94964 1423 aa22.08■■□□□ 1.13
PACS2-211ENST00000551692 MYT1Q01538 1121 aa22.07■■□□□ 1.12
PACS2-211ENST00000551692 RUSC2Q8N2Y8 1516 aa22.04■■□□□ 1.12
PACS2-211ENST00000551692 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
PACS2-211ENST00000551692 ERCC6Q03468 1493 aa22.02■■□□□ 1.12
PACS2-211ENST00000551692 EIF4G3O43432 1585 aaKnown RBP22.01■■□□□ 1.11
PACS2-211ENST00000551692 RAD54L2Q9Y4B4 1467 aa21.99■■□□□ 1.11
PACS2-211ENST00000551692 ADAMTS12P58397 1594 aa21.96■■□□□ 1.11
PACS2-211ENST00000551692 IGF1RP08069 1367 aa21.91■■□□□ 1.1
PACS2-211ENST00000551692 CTTNBP2Q8WZ74 1663 aa21.9■■□□□ 1.1
PACS2-211ENST00000551692 GAPVD1Q14C86 1478 aa21.88■■□□□ 1.09
PACS2-211ENST00000551692 GOLGA3Q08378 1498 aa21.86■■□□□ 1.09
PACS2-211ENST00000551692 GRIN2BQ13224 1484 aa21.84■■□□□ 1.09
PACS2-211ENST00000551692 MAGI1Q96QZ7 1491 aaPredicted RBP21.83■■□□□ 1.09
PACS2-211ENST00000551692 ZNF608Q9ULD9 1512 aaPredicted RBP21.79■■□□□ 1.08
PACS2-211ENST00000551692 CSRNP3Q8WYN3 585 aa21.78■■□□□ 1.08
PACS2-211ENST00000551692 RAPGEF2Q9Y4G8 1499 aa21.78■■□□□ 1.08
PACS2-211ENST00000551692 TNIKQ9UKE5 1360 aa21.77■■□□□ 1.08
PACS2-211ENST00000551692 FHAD1B1AJZ9 1412 aa21.74■■□□□ 1.07
PACS2-211ENST00000551692 SAMD9Q5K651 1589 aa21.68■■□□□ 1.06
PACS2-211ENST00000551692 SYNJ2O15056 1496 aa21.65■■□□□ 1.06
PACS2-211ENST00000551692 CARMIL1Q5VZK9 1371 aa21.65■■□□□ 1.06
PACS2-211ENST00000551692 AQRO60306 1485 aaKnown RBP eCLIP21.64■■□□□ 1.05
PACS2-211ENST00000551692 GTF3C3Q9Y5Q9 886 aa21.63■■□□□ 1.05
PACS2-211ENST00000551692 SHROOM2Q13796 1616 aa21.62■■□□□ 1.05
PACS2-211ENST00000551692 SNAPC4Q5SXM2 1469 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms