RNA–Protein interactions for RNA: ENST00000550710.1

HIGD1AP9-201, Transcript of HIG1 hypoxia inducible domain family member 1A pseudogene 9, humanhuman

BASIC

Gene HIGD1AP9, Length 279 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1AP9-201ENST00000550710 AEBP2Q6ZN18 517 aaPredicted RBP19.79■□□□□ 0.76
HIGD1AP9-201ENST00000550710 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
HIGD1AP9-201ENST00000550710 NISCHQ9Y2I1 1504 aa19.22■□□□□ 0.67
HIGD1AP9-201ENST00000550710 ABCC9O60706 1549 aa17.47■□□□□ 0.39
HIGD1AP9-201ENST00000550710 CCDC180Q9P1Z9 1646 aa17.43■□□□□ 0.38
HIGD1AP9-201ENST00000550710 PHF23Q9BUL5 403 aaPredicted RBP16.91■□□□□ 0.3
HIGD1AP9-201ENST00000550710 SENP3Q9H4L4 574 aaPredicted RBP16.88■□□□□ 0.29
HIGD1AP9-201ENST00000550710 RB1CC1Q8TDY2 1594 aa16.61■□□□□ 0.25
HIGD1AP9-201ENST00000550710 NACADO15069 1562 aa16.42■□□□□ 0.22
HIGD1AP9-201ENST00000550710 UNC13AQ9UPW8 1703 aa16.36■□□□□ 0.21
HIGD1AP9-201ENST00000550710 DCAF8L2P0C7V8 631 aa16.35■□□□□ 0.21
HIGD1AP9-201ENST00000550710 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
HIGD1AP9-201ENST00000550710 PABPN1Q86U42 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
HIGD1AP9-201ENST00000550710 BICRAQ9NZM4 1560 aa16.06■□□□□ 0.16
HIGD1AP9-201ENST00000550710 MYO15BQ96JP2 1530 aa16.06■□□□□ 0.16
HIGD1AP9-201ENST00000550710 ZCCHC6Q5VYS8 1495 aaKnown RBP15.91■□□□□ 0.14
HIGD1AP9-201ENST00000550710 SCRIBQ14160 1630 aa15.88■□□□□ 0.13
HIGD1AP9-201ENST00000550710 DCAF1Q9Y4B6 1507 aa15.84■□□□□ 0.13
HIGD1AP9-201ENST00000550710 SHROOM4Q9ULL8 1493 aa15.82■□□□□ 0.12
HIGD1AP9-201ENST00000550710 CC2D2AQ9P2K1 1620 aa15.81■□□□□ 0.12
HIGD1AP9-201ENST00000550710 CECR2Q9BXF3 1484 aa15.72■□□□□ 0.11
HIGD1AP9-201ENST00000550710 EIF4G1Q04637 1599 aaKnown RBP15.72■□□□□ 0.11
HIGD1AP9-201ENST00000550710 PLPPR3Q6T4P5 718 aa15.67■□□□□ 0.1
HIGD1AP9-201ENST00000550710 FOXD1Q16676 465 aa15.64■□□□□ 0.09
HIGD1AP9-201ENST00000550710 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
HIGD1AP9-201ENST00000550710 DNAJC5Q9H3Z4 198 aa15.11■□□□□ 0.01
HIGD1AP9-201ENST00000550710 SMARCA4P51532 1647 aa15.1■□□□□ 0.01
HIGD1AP9-201ENST00000550710 CUX2O14529 1486 aa15.08■□□□□ 0
HIGD1AP9-201ENST00000550710 NCAPD3P42695 1498 aa15.07■□□□□ 0
HIGD1AP9-201ENST00000550710 SMARCA2P51531 1590 aa15.07■□□□□ 0
HIGD1AP9-201ENST00000550710 HMGXB3Q12766 1538 aa15.04■□□□□ -0
HIGD1AP9-201ENST00000550710 ATAD2BQ9ULI0 1458 aa15.04■□□□□ -0
HIGD1AP9-201ENST00000550710 ADRA2BP18089 450 aa15□□□□□ -0.01
HIGD1AP9-201ENST00000550710 BAZ1AQ9NRL2 1556 aaPredicted RBP14.98□□□□□ -0.01
HIGD1AP9-201ENST00000550710 BAZ1BQ9UIG0 1483 aaKnown RBP14.97□□□□□ -0.01
HIGD1AP9-201ENST00000550710 PPP6R1Q9UPN7 881 aa14.97□□□□□ -0.01
HIGD1AP9-201ENST00000550710 NESP48681 1621 aa14.96□□□□□ -0.01
HIGD1AP9-201ENST00000550710 KIF21AQ7Z4S6 1674 aa14.9□□□□□ -0.02
HIGD1AP9-201ENST00000550710 THOC2Q8NI27 1593 aaKnown RBP14.88□□□□□ -0.03
HIGD1AP9-201ENST00000550710 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
HIGD1AP9-201ENST00000550710 LAMC3Q9Y6N6 1575 aa14.87□□□□□ -0.03
HIGD1AP9-201ENST00000550710 MROH2BQ7Z745 1585 aa14.82□□□□□ -0.04
HIGD1AP9-201ENST00000550710 PIAS4Q8N2W9 510 aaPredicted RBP14.8□□□□□ -0.04
HIGD1AP9-201ENST00000550710 WIZO95785 1651 aa14.74□□□□□ -0.05
HIGD1AP9-201ENST00000550710 PDS5BQ9NTI5 1447 aa14.74□□□□□ -0.05
HIGD1AP9-201ENST00000550710 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
HIGD1AP9-201ENST00000550710 CADPSQ9ULU8 1353 aa14.62□□□□□ -0.07
HIGD1AP9-201ENST00000550710 WDR62O43379 1518 aa14.61□□□□□ -0.07
HIGD1AP9-201ENST00000550710 CEP164Q9UPV0 1460 aa14.58□□□□□ -0.08
HIGD1AP9-201ENST00000550710 PRDM2Q13029 1718 aa14.55□□□□□ -0.08
HIGD1AP9-201ENST00000550710 TRIM41Q8WV44 630 aa14.55□□□□□ -0.08
HIGD1AP9-201ENST00000550710 FANCD2Q9BXW9 1451 aa14.52□□□□□ -0.08
HIGD1AP9-201ENST00000550710 MSH5O43196 834 aa14.5□□□□□ -0.09
HIGD1AP9-201ENST00000550710 TOP2AP11388 1531 aaKnown RBP14.48□□□□□ -0.09
HIGD1AP9-201ENST00000550710 CFTRP13569 1480 aa14.44□□□□□ -0.1
HIGD1AP9-201ENST00000550710 RSF1Q96T23 1441 aaPredicted RBP14.41□□□□□ -0.1
HIGD1AP9-201ENST00000550710 URB2Q14146 1524 aaKnown RBP14.4□□□□□ -0.1
HIGD1AP9-201ENST00000550710 OSCARQ8IYS5 282 aa14.33□□□□□ -0.12
HIGD1AP9-201ENST00000550710 RIMBP3CA6NJZ7 1639 aa14.28□□□□□ -0.12
HIGD1AP9-201ENST00000550710 RIMBP3BA6NNM3 1639 aa14.28□□□□□ -0.12
HIGD1AP9-201ENST00000550710 RIMBP3Q9UFD9 1639 aa14.28□□□□□ -0.12
HIGD1AP9-201ENST00000550710 CCDC88BA6NC98 1476 aa14.26□□□□□ -0.13
HIGD1AP9-201ENST00000550710 EIF4G3O43432 1585 aaKnown RBP14.26□□□□□ -0.13
HIGD1AP9-201ENST00000550710 CHD1O14646 1710 aa14.25□□□□□ -0.13
HIGD1AP9-201ENST00000550710 IFT140Q96RY7 1462 aa14.25□□□□□ -0.13
HIGD1AP9-201ENST00000550710 TOPBP1Q92547 1522 aa14.24□□□□□ -0.13
HIGD1AP9-201ENST00000550710 ZNF608Q9ULD9 1512 aaPredicted RBP14.23□□□□□ -0.13
HIGD1AP9-201ENST00000550710 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
HIGD1AP9-201ENST00000550710 ABCC8Q09428 1581 aa14.19□□□□□ -0.14
HIGD1AP9-201ENST00000550710 ARHGEF11O15085 1522 aa14.17□□□□□ -0.14
HIGD1AP9-201ENST00000550710 TARBP1Q13395 1621 aaKnown RBP14.14□□□□□ -0.15
HIGD1AP9-201ENST00000550710 FBLN2P98095 1184 aa14.09□□□□□ -0.15
HIGD1AP9-201ENST00000550710 AQRO60306 1485 aaKnown RBP eCLIP14.09□□□□□ -0.15
HIGD1AP9-201ENST00000550710 POLA1P09884 1462 aaPredicted RBP14.07□□□□□ -0.16
HIGD1AP9-201ENST00000550710 CYB5RLQ6IPT4 315 aa14.03□□□□□ -0.16
HIGD1AP9-201ENST00000550710 RAD54L2Q9Y4B4 1467 aa14.03□□□□□ -0.16
HIGD1AP9-201ENST00000550710 PBRM1Q86U86 1689 aa14.01□□□□□ -0.17
HIGD1AP9-201ENST00000550710 TRHP20396 242 aaPredicted RBP14□□□□□ -0.17
HIGD1AP9-201ENST00000550710 WDR97A6NE52 1622 aa14□□□□□ -0.17
HIGD1AP9-201ENST00000550710 FGD5Q6ZNL6 1462 aa13.99□□□□□ -0.17
HIGD1AP9-201ENST00000550710 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
HIGD1AP9-201ENST00000550710 SOGA1O94964 1423 aa13.99□□□□□ -0.17
HIGD1AP9-201ENST00000550710 SNAPC4Q5SXM2 1469 aa13.99□□□□□ -0.17
HIGD1AP9-201ENST00000550710 TDRD9Q8NDG6 1382 aaKnown RBP13.98□□□□□ -0.17
HIGD1AP9-201ENST00000550710 SYNJ1O43426 1573 aa13.97□□□□□ -0.17
HIGD1AP9-201ENST00000550710 CUX1P39880 1505 aa13.94□□□□□ -0.18
HIGD1AP9-201ENST00000550710 CLASP1Q7Z460 1538 aa13.92□□□□□ -0.18
HIGD1AP9-201ENST00000550710 CHMP7Q8WUX9 453 aaPredicted RBP13.92□□□□□ -0.18
HIGD1AP9-201ENST00000550710 MAGI1Q96QZ7 1491 aaPredicted RBP13.92□□□□□ -0.18
HIGD1AP9-201ENST00000550710 GRIN2BQ13224 1484 aa13.9□□□□□ -0.18
HIGD1AP9-201ENST00000550710 SYNJ2O15056 1496 aa13.87□□□□□ -0.19
HIGD1AP9-201ENST00000550710 ABCA5Q8WWZ7 1642 aa13.85□□□□□ -0.19
HIGD1AP9-201ENST00000550710 GAPVD1Q14C86 1478 aa13.85□□□□□ -0.19
HIGD1AP9-201ENST00000550710 PPP4R3CPQ6ZMV5 832 aa13.8□□□□□ -0.2
HIGD1AP9-201ENST00000550710 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
HIGD1AP9-201ENST00000550710 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
HIGD1AP9-201ENST00000550710 ABCA10Q8WWZ4 1543 aa13.79□□□□□ -0.2
HIGD1AP9-201ENST00000550710 BIVM-ERCC5R4GMW8 1640 aa13.76□□□□□ -0.21
HIGD1AP9-201ENST00000550710 ADAMTS12P58397 1594 aa13.76□□□□□ -0.21
HIGD1AP9-201ENST00000550710 GRIN2AQ12879 1464 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms