RNA–Protein interactions for RNA: ENST00000550018.5

PPFIA2-218, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-218ENST00000550018 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
PPFIA2-218ENST00000550018 ABCC9O60706 1549 aa23.03■■□□□ 1.28
PPFIA2-218ENST00000550018 CCDC180Q9P1Z9 1646 aa22.74■■□□□ 1.23
PPFIA2-218ENST00000550018 DNAJC5BQ9UF47 199 aa21.87■■□□□ 1.09
PPFIA2-218ENST00000550018 AEBP2Q6ZN18 517 aaPredicted RBP21.86■■□□□ 1.09
PPFIA2-218ENST00000550018 RB1CC1Q8TDY2 1594 aa21.68■■□□□ 1.06
PPFIA2-218ENST00000550018 UNC13AQ9UPW8 1703 aa21.52■■□□□ 1.03
PPFIA2-218ENST00000550018 NACADO15069 1562 aa21.44■■□□□ 1.02
PPFIA2-218ENST00000550018 PABPN1Q86U42 306 aaKnown RBP eCLIP21.34■■□□□ 1.01
PPFIA2-218ENST00000550018 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
PPFIA2-218ENST00000550018 DCAF8L2P0C7V8 631 aa21.18■□□□□ 0.98
PPFIA2-218ENST00000550018 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
PPFIA2-218ENST00000550018 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
PPFIA2-218ENST00000550018 ZCCHC6Q5VYS8 1495 aaKnown RBP20.86■□□□□ 0.93
PPFIA2-218ENST00000550018 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
PPFIA2-218ENST00000550018 CC2D2AQ9P2K1 1620 aa20.81■□□□□ 0.92
PPFIA2-218ENST00000550018 CECR2Q9BXF3 1484 aa20.69■□□□□ 0.9
PPFIA2-218ENST00000550018 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
PPFIA2-218ENST00000550018 EIF4G1Q04637 1599 aaKnown RBP20.67■□□□□ 0.9
PPFIA2-218ENST00000550018 SHROOM4Q9ULL8 1493 aa20.64■□□□□ 0.89
PPFIA2-218ENST00000550018 DNAJC5Q9H3Z4 198 aa20.04■□□□□ 0.8
PPFIA2-218ENST00000550018 CUX2O14529 1486 aa19.8■□□□□ 0.76
PPFIA2-218ENST00000550018 NESP48681 1621 aa19.79■□□□□ 0.76
PPFIA2-218ENST00000550018 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
PPFIA2-218ENST00000550018 SMARCA4P51532 1647 aa19.77■□□□□ 0.76
PPFIA2-218ENST00000550018 ATAD2BQ9ULI0 1458 aa19.77■□□□□ 0.76
PPFIA2-218ENST00000550018 ERCC6Q03468 1493 aa19.76■□□□□ 0.75
PPFIA2-218ENST00000550018 HMGXB3Q12766 1538 aa19.69■□□□□ 0.74
PPFIA2-218ENST00000550018 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
PPFIA2-218ENST00000550018 SMARCA2P51531 1590 aa19.62■□□□□ 0.73
PPFIA2-218ENST00000550018 KIF21AQ7Z4S6 1674 aa19.59■□□□□ 0.73
PPFIA2-218ENST00000550018 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
PPFIA2-218ENST00000550018 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
PPFIA2-218ENST00000550018 BAZ1AQ9NRL2 1556 aaPredicted RBP19.5■□□□□ 0.71
PPFIA2-218ENST00000550018 MROH2BQ7Z745 1585 aa19.49■□□□□ 0.71
PPFIA2-218ENST00000550018 LAMC3Q9Y6N6 1575 aa19.42■□□□□ 0.7
PPFIA2-218ENST00000550018 WIZO95785 1651 aa19.3■□□□□ 0.68
PPFIA2-218ENST00000550018 WDR62O43379 1518 aa19.21■□□□□ 0.67
PPFIA2-218ENST00000550018 MRC2Q9UBG0 1479 aa19.19■□□□□ 0.66
PPFIA2-218ENST00000550018 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
PPFIA2-218ENST00000550018 CADPSQ9ULU8 1353 aa19.14■□□□□ 0.65
PPFIA2-218ENST00000550018 TRIM41Q8WV44 630 aa19.13■□□□□ 0.65
PPFIA2-218ENST00000550018 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
PPFIA2-218ENST00000550018 FANCD2Q9BXW9 1451 aa19.02■□□□□ 0.63
PPFIA2-218ENST00000550018 URB2Q14146 1524 aaKnown RBP18.99■□□□□ 0.63
PPFIA2-218ENST00000550018 CFTRP13569 1480 aa18.94■□□□□ 0.62
PPFIA2-218ENST00000550018 TOP2AP11388 1531 aaKnown RBP18.92■□□□□ 0.62
PPFIA2-218ENST00000550018 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
PPFIA2-218ENST00000550018 RSF1Q96T23 1441 aaPredicted RBP18.89■□□□□ 0.61
PPFIA2-218ENST00000550018 RIMBP3CA6NJZ7 1639 aa18.84■□□□□ 0.61
PPFIA2-218ENST00000550018 RIMBP3BA6NNM3 1639 aa18.84■□□□□ 0.61
PPFIA2-218ENST00000550018 RIMBP3Q9UFD9 1639 aa18.84■□□□□ 0.61
PPFIA2-218ENST00000550018 ZNF608Q9ULD9 1512 aaPredicted RBP18.81■□□□□ 0.6
PPFIA2-218ENST00000550018 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
PPFIA2-218ENST00000550018 OSCARQ8IYS5 282 aa18.71■□□□□ 0.59
PPFIA2-218ENST00000550018 CCDC88BA6NC98 1476 aa18.69■□□□□ 0.58
PPFIA2-218ENST00000550018 CHD1O14646 1710 aa18.69■□□□□ 0.58
PPFIA2-218ENST00000550018 ARHGEF11O15085 1522 aa18.68■□□□□ 0.58
PPFIA2-218ENST00000550018 TOPBP1Q92547 1522 aa18.68■□□□□ 0.58
PPFIA2-218ENST00000550018 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
PPFIA2-218ENST00000550018 IFT140Q96RY7 1462 aa18.63■□□□□ 0.57
PPFIA2-218ENST00000550018 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
PPFIA2-218ENST00000550018 DNMBPQ6XZF7 1577 aa18.57■□□□□ 0.56
PPFIA2-218ENST00000550018 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.56
PPFIA2-218ENST00000550018 ARAP1Q96P48 1450 aa18.52■□□□□ 0.56
PPFIA2-218ENST00000550018 POLA1P09884 1462 aaPredicted RBP18.47■□□□□ 0.55
PPFIA2-218ENST00000550018 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.54
PPFIA2-218ENST00000550018 PHF23Q9BUL5 403 aaPredicted RBP18.44■□□□□ 0.54
PPFIA2-218ENST00000550018 CYB5RLQ6IPT4 315 aa18.39■□□□□ 0.53
PPFIA2-218ENST00000550018 CLASP1Q7Z460 1538 aa18.38■□□□□ 0.53
PPFIA2-218ENST00000550018 ABCC8Q09428 1581 aa18.37■□□□□ 0.53
PPFIA2-218ENST00000550018 WDR97A6NE52 1622 aa18.36■□□□□ 0.53
PPFIA2-218ENST00000550018 SNAPC4Q5SXM2 1469 aa18.35■□□□□ 0.53
PPFIA2-218ENST00000550018 TDRD9Q8NDG6 1382 aaKnown RBP18.33■□□□□ 0.53
PPFIA2-218ENST00000550018 CUX1P39880 1505 aa18.33■□□□□ 0.52
PPFIA2-218ENST00000550018 FGD5Q6ZNL6 1462 aa18.33■□□□□ 0.52
PPFIA2-218ENST00000550018 FBLN2P98095 1184 aa18.29■□□□□ 0.52
PPFIA2-218ENST00000550018 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
PPFIA2-218ENST00000550018 SOGA1O94964 1423 aa18.25■□□□□ 0.51
PPFIA2-218ENST00000550018 TRHP20396 242 aaPredicted RBP18.22■□□□□ 0.51
PPFIA2-218ENST00000550018 SYNJ1O43426 1573 aa18.2■□□□□ 0.5
PPFIA2-218ENST00000550018 ERCC6L2Q5T890 1561 aa18.2■□□□□ 0.5
PPFIA2-218ENST00000550018 ABCA5Q8WWZ7 1642 aa18.17■□□□□ 0.5
PPFIA2-218ENST00000550018 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
PPFIA2-218ENST00000550018 GRIN2BQ13224 1484 aa18.14■□□□□ 0.5
PPFIA2-218ENST00000550018 SYNJ2O15056 1496 aa18.14■□□□□ 0.49
PPFIA2-218ENST00000550018 GAPVD1Q14C86 1478 aa18.07■□□□□ 0.48
PPFIA2-218ENST00000550018 CEP170Q5SW79 1584 aa18.06■□□□□ 0.48
PPFIA2-218ENST00000550018 ADAMTS12P58397 1594 aa18.05■□□□□ 0.48
PPFIA2-218ENST00000550018 CHMP7Q8WUX9 453 aaPredicted RBP18.05■□□□□ 0.48
PPFIA2-218ENST00000550018 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
PPFIA2-218ENST00000550018 GRIN2AQ12879 1464 aa17.98■□□□□ 0.47
PPFIA2-218ENST00000550018 SHROOM2Q13796 1616 aa17.98■□□□□ 0.47
PPFIA2-218ENST00000550018 KIF13AQ9H1H9 1805 aa17.97■□□□□ 0.47
PPFIA2-218ENST00000550018 BIVM-ERCC5R4GMW8 1640 aa17.95■□□□□ 0.46
PPFIA2-218ENST00000550018 NUP160Q12769 1436 aa17.92■□□□□ 0.46
PPFIA2-218ENST00000550018 TOP2BQ02880 1626 aa17.9■□□□□ 0.46
PPFIA2-218ENST00000550018 RUSC2Q8N2Y8 1516 aa17.82■□□□□ 0.44
PPFIA2-218ENST00000550018 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
PPFIA2-218ENST00000550018 FHAD1B1AJZ9 1412 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms