RNA–Protein interactions for RNA: ENST00000549985.1

ELK3-205, Transcript of ELK3, ETS transcription factor, humanhuman

TSL 3

Gene ELK3, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELK3-205ENST00000549985 AEBP2Q6ZN18 517 aaPredicted RBP19.1■□□□□ 0.65
ELK3-205ENST00000549985 NISCHQ9Y2I1 1504 aa18.86■□□□□ 0.61
ELK3-205ENST00000549985 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
ELK3-205ENST00000549985 ABCC9O60706 1549 aa17.04■□□□□ 0.32
ELK3-205ENST00000549985 CCDC180Q9P1Z9 1646 aa16.67■□□□□ 0.26
ELK3-205ENST00000549985 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
ELK3-205ENST00000549985 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
ELK3-205ENST00000549985 SENP3Q9H4L4 574 aaPredicted RBP16.26■□□□□ 0.19
ELK3-205ENST00000549985 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
ELK3-205ENST00000549985 NACADO15069 1562 aa15.81■□□□□ 0.12
ELK3-205ENST00000549985 PABPN1Q86U42 306 aaKnown RBP eCLIP15.78■□□□□ 0.12
ELK3-205ENST00000549985 DCAF8L2P0C7V8 631 aa15.73■□□□□ 0.11
ELK3-205ENST00000549985 UNC13AQ9UPW8 1703 aa15.73■□□□□ 0.11
ELK3-205ENST00000549985 ZCCHC6Q5VYS8 1495 aaKnown RBP15.72■□□□□ 0.11
ELK3-205ENST00000549985 BICRAQ9NZM4 1560 aa15.58■□□□□ 0.09
ELK3-205ENST00000549985 MYO15BQ96JP2 1530 aa15.58■□□□□ 0.08
ELK3-205ENST00000549985 DCAF1Q9Y4B6 1507 aa15.56■□□□□ 0.08
ELK3-205ENST00000549985 CECR2Q9BXF3 1484 aa15.39■□□□□ 0.05
ELK3-205ENST00000549985 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
ELK3-205ENST00000549985 DNAJC5Q9H3Z4 198 aa15.32■□□□□ 0.04
ELK3-205ENST00000549985 PLPPR3Q6T4P5 718 aa15.3■□□□□ 0.04
ELK3-205ENST00000549985 SHROOM4Q9ULL8 1493 aa15.3■□□□□ 0.04
ELK3-205ENST00000549985 SCRIBQ14160 1630 aa15.28■□□□□ 0.04
ELK3-205ENST00000549985 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
ELK3-205ENST00000549985 FOXD1Q16676 465 aa15.03■□□□□ -0
ELK3-205ENST00000549985 CUX2O14529 1486 aa14.84□□□□□ -0.03
ELK3-205ENST00000549985 ERCC6Q03468 1493 aa14.75□□□□□ -0.05
ELK3-205ENST00000549985 SMARCA4P51532 1647 aa14.6□□□□□ -0.07
ELK3-205ENST00000549985 NCAPD3P42695 1498 aa14.58□□□□□ -0.08
ELK3-205ENST00000549985 MROH2BQ7Z745 1585 aa14.58□□□□□ -0.08
ELK3-205ENST00000549985 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
ELK3-205ENST00000549985 NESP48681 1621 aa14.52□□□□□ -0.09
ELK3-205ENST00000549985 ATAD2BQ9ULI0 1458 aa14.51□□□□□ -0.09
ELK3-205ENST00000549985 PPP6R1Q9UPN7 881 aa14.51□□□□□ -0.09
ELK3-205ENST00000549985 ADRA2BP18089 450 aa14.49□□□□□ -0.09
ELK3-205ENST00000549985 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
ELK3-205ENST00000549985 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
ELK3-205ENST00000549985 PEG3Q9GZU2 1588 aa14.45□□□□□ -0.1
ELK3-205ENST00000549985 HMGXB3Q12766 1538 aa14.45□□□□□ -0.1
ELK3-205ENST00000549985 SMARCA2P51531 1590 aa14.44□□□□□ -0.1
ELK3-205ENST00000549985 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
ELK3-205ENST00000549985 WIZO95785 1651 aa14.42□□□□□ -0.1
ELK3-205ENST00000549985 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
ELK3-205ENST00000549985 KIF21AQ7Z4S6 1674 aa14.36□□□□□ -0.11
ELK3-205ENST00000549985 LAMC3Q9Y6N6 1575 aa14.35□□□□□ -0.11
ELK3-205ENST00000549985 PDS5BQ9NTI5 1447 aa14.26□□□□□ -0.13
ELK3-205ENST00000549985 TOP2AP11388 1531 aaKnown RBP14.22□□□□□ -0.13
ELK3-205ENST00000549985 PIAS4Q8N2W9 510 aaPredicted RBP14.19□□□□□ -0.14
ELK3-205ENST00000549985 MRC2Q9UBG0 1479 aa14.17□□□□□ -0.14
ELK3-205ENST00000549985 WDR62O43379 1518 aa14.15□□□□□ -0.14
ELK3-205ENST00000549985 SUPT5HO00267 1087 aaKnown RBP14.14□□□□□ -0.15
ELK3-205ENST00000549985 CADPSQ9ULU8 1353 aa14.11□□□□□ -0.15
ELK3-205ENST00000549985 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
ELK3-205ENST00000549985 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
ELK3-205ENST00000549985 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
ELK3-205ENST00000549985 CFTRP13569 1480 aa13.99□□□□□ -0.17
ELK3-205ENST00000549985 RIMBP3CA6NJZ7 1639 aa13.99□□□□□ -0.17
ELK3-205ENST00000549985 RIMBP3BA6NNM3 1639 aa13.99□□□□□ -0.17
ELK3-205ENST00000549985 RIMBP3Q9UFD9 1639 aa13.99□□□□□ -0.17
ELK3-205ENST00000549985 FANCD2Q9BXW9 1451 aa13.97□□□□□ -0.17
ELK3-205ENST00000549985 URB2Q14146 1524 aaKnown RBP13.89□□□□□ -0.19
ELK3-205ENST00000549985 MSH5O43196 834 aa13.88□□□□□ -0.19
ELK3-205ENST00000549985 ARHGEF11O15085 1522 aa13.88□□□□□ -0.19
ELK3-205ENST00000549985 PRDM2Q13029 1718 aa13.85□□□□□ -0.19
ELK3-205ENST00000549985 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
ELK3-205ENST00000549985 CYB5RLQ6IPT4 315 aa13.81□□□□□ -0.2
ELK3-205ENST00000549985 ZNF608Q9ULD9 1512 aaPredicted RBP13.79□□□□□ -0.2
ELK3-205ENST00000549985 IFT140Q96RY7 1462 aa13.75□□□□□ -0.21
ELK3-205ENST00000549985 CHD1O14646 1710 aa13.73□□□□□ -0.21
ELK3-205ENST00000549985 EIF4G3O43432 1585 aaKnown RBP13.71□□□□□ -0.21
ELK3-205ENST00000549985 ARAP1Q96P48 1450 aa13.71□□□□□ -0.21
ELK3-205ENST00000549985 TOPBP1Q92547 1522 aa13.7□□□□□ -0.22
ELK3-205ENST00000549985 DNMBPQ6XZF7 1577 aa13.66□□□□□ -0.22
ELK3-205ENST00000549985 CUX1P39880 1505 aa13.65□□□□□ -0.22
ELK3-205ENST00000549985 ABCC8Q09428 1581 aa13.62□□□□□ -0.23
ELK3-205ENST00000549985 FBLN2P98095 1184 aa13.62□□□□□ -0.23
ELK3-205ENST00000549985 AQRO60306 1485 aaKnown RBP eCLIP13.61□□□□□ -0.23
ELK3-205ENST00000549985 POLA1P09884 1462 aaPredicted RBP13.6□□□□□ -0.23
ELK3-205ENST00000549985 TARBP1Q13395 1621 aaKnown RBP13.59□□□□□ -0.23
ELK3-205ENST00000549985 FGD5Q6ZNL6 1462 aa13.57□□□□□ -0.24
ELK3-205ENST00000549985 RAD54L2Q9Y4B4 1467 aa13.57□□□□□ -0.24
ELK3-205ENST00000549985 SYNJ1O43426 1573 aa13.57□□□□□ -0.24
ELK3-205ENST00000549985 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
ELK3-205ENST00000549985 SOGA1O94964 1423 aa13.53□□□□□ -0.24
ELK3-205ENST00000549985 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
ELK3-205ENST00000549985 TOP2BQ02880 1626 aa13.52□□□□□ -0.25
ELK3-205ENST00000549985 CLASP1Q7Z460 1538 aa13.5□□□□□ -0.25
ELK3-205ENST00000549985 TDRD9Q8NDG6 1382 aaKnown RBP13.47□□□□□ -0.25
ELK3-205ENST00000549985 PPP4R3CPQ6ZMV5 832 aa13.46□□□□□ -0.25
ELK3-205ENST00000549985 WDR97A6NE52 1622 aa13.46□□□□□ -0.26
ELK3-205ENST00000549985 SNAPC4Q5SXM2 1469 aa13.45□□□□□ -0.26
ELK3-205ENST00000549985 CHMP7Q8WUX9 453 aaPredicted RBP13.43□□□□□ -0.26
ELK3-205ENST00000549985 ABCA10Q8WWZ4 1543 aa13.43□□□□□ -0.26
ELK3-205ENST00000549985 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.26
ELK3-205ENST00000549985 MAGI1Q96QZ7 1491 aaPredicted RBP13.4□□□□□ -0.26
ELK3-205ENST00000549985 ABCA5Q8WWZ7 1642 aa13.38□□□□□ -0.27
ELK3-205ENST00000549985 SYNJ2O15056 1496 aa13.36□□□□□ -0.27
ELK3-205ENST00000549985 GRIN2BQ13224 1484 aa13.36□□□□□ -0.27
ELK3-205ENST00000549985 SCAF1Q9H7N4 1312 aaKnown RBP13.34□□□□□ -0.27
ELK3-205ENST00000549985 PBRM1Q86U86 1689 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms