RNA–Protein interactions for RNA: ENST00000549691.1

CPM-209, Transcript of carboxypeptidase M, humanhuman

TSL 3

Gene CPM, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-209ENST00000549691 NISCHQ9Y2I1 1504 aa11.4□□□□□ -0.59
CPM-209ENST00000549691 AEBP2Q6ZN18 517 aaPredicted RBP11.01□□□□□ -0.65
CPM-209ENST00000549691 CHIC1Q5VXU3 224 aa10.95□□□□□ -0.66
CPM-209ENST00000549691 ABCC9O60706 1549 aa10.51□□□□□ -0.73
CPM-209ENST00000549691 CCDC180Q9P1Z9 1646 aa10.39□□□□□ -0.75
CPM-209ENST00000549691 DNAJC5BQ9UF47 199 aa10.13□□□□□ -0.79
CPM-209ENST00000549691 RB1CC1Q8TDY2 1594 aa9.99□□□□□ -0.81
CPM-209ENST00000549691 NACADO15069 1562 aa9.88□□□□□ -0.83
CPM-209ENST00000549691 UNC13AQ9UPW8 1703 aa9.76□□□□□ -0.85
CPM-209ENST00000549691 PABPN1Q86U42 306 aaKnown RBP eCLIP9.76□□□□□ -0.85
CPM-209ENST00000549691 PHF23Q9BUL5 403 aaPredicted RBP9.71□□□□□ -0.86
CPM-209ENST00000549691 DCAF8L2P0C7V8 631 aa9.7□□□□□ -0.86
CPM-209ENST00000549691 MYO15BQ96JP2 1530 aa9.7□□□□□ -0.86
CPM-209ENST00000549691 BICRAQ9NZM4 1560 aa9.67□□□□□ -0.86
CPM-209ENST00000549691 SHROOM4Q9ULL8 1493 aa9.59□□□□□ -0.87
CPM-209ENST00000549691 DNAJC5Q9H3Z4 198 aa9.59□□□□□ -0.87
CPM-209ENST00000549691 CECR2Q9BXF3 1484 aa9.54□□□□□ -0.88
CPM-209ENST00000549691 CC2D2AQ9P2K1 1620 aa9.53□□□□□ -0.88
CPM-209ENST00000549691 DCAF1Q9Y4B6 1507 aa9.46□□□□□ -0.9
CPM-209ENST00000549691 EIF4G1Q04637 1599 aaKnown RBP9.45□□□□□ -0.9
CPM-209ENST00000549691 SENP3Q9H4L4 574 aaPredicted RBP9.41□□□□□ -0.9
CPM-209ENST00000549691 ZCCHC6Q5VYS8 1495 aaKnown RBP9.34□□□□□ -0.91
CPM-209ENST00000549691 SCRIBQ14160 1630 aa9.31□□□□□ -0.92
CPM-209ENST00000549691 CUX2O14529 1486 aa9.25□□□□□ -0.93
CPM-209ENST00000549691 ERCC6Q03468 1493 aa9.13□□□□□ -0.95
CPM-209ENST00000549691 NCAPD3P42695 1498 aa9.12□□□□□ -0.95
CPM-209ENST00000549691 PLPPR3Q6T4P5 718 aa9.04□□□□□ -0.96
CPM-209ENST00000549691 SMARCA2P51531 1590 aa9□□□□□ -0.97
CPM-209ENST00000549691 ATAD2BQ9ULI0 1458 aa9□□□□□ -0.97
CPM-209ENST00000549691 HMGXB3Q12766 1538 aa8.99□□□□□ -0.97
CPM-209ENST00000549691 NESP48681 1621 aa8.95□□□□□ -0.98
CPM-209ENST00000549691 LAMC3Q9Y6N6 1575 aa8.95□□□□□ -0.98
CPM-209ENST00000549691 TRIM41Q8WV44 630 aa8.94□□□□□ -0.98
CPM-209ENST00000549691 THOC2Q8NI27 1593 aaKnown RBP8.93□□□□□ -0.98
CPM-209ENST00000549691 SMARCA4P51532 1647 aa8.92□□□□□ -0.98
CPM-209ENST00000549691 PDS5BQ9NTI5 1447 aa8.91□□□□□ -0.98
CPM-209ENST00000549691 PEG3Q9GZU2 1588 aa8.89□□□□□ -0.99
CPM-209ENST00000549691 BAZ1BQ9UIG0 1483 aaKnown RBP8.89□□□□□ -0.99
CPM-209ENST00000549691 BAZ1AQ9NRL2 1556 aaPredicted RBP8.87□□□□□ -0.99
CPM-209ENST00000549691 KIF21AQ7Z4S6 1674 aa8.87□□□□□ -0.99
CPM-209ENST00000549691 OSCARQ8IYS5 282 aa8.84□□□□□ -0.99
CPM-209ENST00000549691 CADPSQ9ULU8 1353 aa8.81□□□□□ -1
CPM-209ENST00000549691 MRC2Q9UBG0 1479 aa8.79□□□□□ -1
CPM-209ENST00000549691 WDR62O43379 1518 aa8.79□□□□□ -1
CPM-209ENST00000549691 MROH2BQ7Z745 1585 aa8.73□□□□□ -1.01
CPM-209ENST00000549691 FOXD1Q16676 465 aa8.72□□□□□ -1.01
CPM-209ENST00000549691 CEP164Q9UPV0 1460 aa8.7□□□□□ -1.02
CPM-209ENST00000549691 FANCD2Q9BXW9 1451 aa8.67□□□□□ -1.02
CPM-209ENST00000549691 RIMBP3CA6NJZ7 1639 aa8.66□□□□□ -1.02
CPM-209ENST00000549691 RIMBP3BA6NNM3 1639 aa8.66□□□□□ -1.02
CPM-209ENST00000549691 RIMBP3Q9UFD9 1639 aa8.66□□□□□ -1.02
CPM-209ENST00000549691 CFTRP13569 1480 aa8.64□□□□□ -1.03
CPM-209ENST00000549691 WIZO95785 1651 aa8.62□□□□□ -1.03
CPM-209ENST00000549691 ARHGEF11O15085 1522 aa8.59□□□□□ -1.03
CPM-209ENST00000549691 URB2Q14146 1524 aaKnown RBP8.59□□□□□ -1.03
CPM-209ENST00000549691 CYB5RLQ6IPT4 315 aa8.59□□□□□ -1.03
CPM-209ENST00000549691 PRDM2Q13029 1718 aa8.59□□□□□ -1.03
CPM-209ENST00000549691 IFT140Q96RY7 1462 aa8.57□□□□□ -1.04
CPM-209ENST00000549691 TRHP20396 242 aaPredicted RBP8.56□□□□□ -1.04
CPM-209ENST00000549691 ABCC8Q09428 1581 aa8.56□□□□□ -1.04
CPM-209ENST00000549691 ZNF608Q9ULD9 1512 aaPredicted RBP8.51□□□□□ -1.05
CPM-209ENST00000549691 RSF1Q96T23 1441 aaPredicted RBP8.51□□□□□ -1.05
CPM-209ENST00000549691 TOP2AP11388 1531 aaKnown RBP8.5□□□□□ -1.05
CPM-209ENST00000549691 ADRA2BP18089 450 aa8.49□□□□□ -1.05
CPM-209ENST00000549691 CHD1O14646 1710 aa8.49□□□□□ -1.05
CPM-209ENST00000549691 TOPBP1Q92547 1522 aa8.48□□□□□ -1.05
CPM-209ENST00000549691 ARAP1Q96P48 1450 aa8.47□□□□□ -1.05
CPM-209ENST00000549691 EIF4G3O43432 1585 aaKnown RBP8.47□□□□□ -1.05
CPM-209ENST00000549691 TARBP1Q13395 1621 aaKnown RBP8.44□□□□□ -1.06
CPM-209ENST00000549691 FBLN2P98095 1184 aa8.44□□□□□ -1.06
CPM-209ENST00000549691 PPP6R1Q9UPN7 881 aa8.44□□□□□ -1.06
CPM-209ENST00000549691 DNMBPQ6XZF7 1577 aa8.44□□□□□ -1.06
CPM-209ENST00000549691 AQRO60306 1485 aaKnown RBP eCLIP8.43□□□□□ -1.06
CPM-209ENST00000549691 CCDC88BA6NC98 1476 aa8.42□□□□□ -1.06
CPM-209ENST00000549691 WDR97A6NE52 1622 aa8.4□□□□□ -1.06
CPM-209ENST00000549691 CHMP7Q8WUX9 453 aaPredicted RBP8.38□□□□□ -1.07
CPM-209ENST00000549691 CLASP1Q7Z460 1538 aa8.38□□□□□ -1.07
CPM-209ENST00000549691 SYNJ1O43426 1573 aa8.37□□□□□ -1.07
CPM-209ENST00000549691 SOGA1O94964 1423 aa8.37□□□□□ -1.07
CPM-209ENST00000549691 POLA1P09884 1462 aaPredicted RBP8.36□□□□□ -1.07
CPM-209ENST00000549691 MAGI1Q96QZ7 1491 aaPredicted RBP8.35□□□□□ -1.07
CPM-209ENST00000549691 TDRD9Q8NDG6 1382 aaKnown RBP8.34□□□□□ -1.07
CPM-209ENST00000549691 SYNJ2O15056 1496 aa8.32□□□□□ -1.08
CPM-209ENST00000549691 GRIN2BQ13224 1484 aa8.32□□□□□ -1.08
CPM-209ENST00000549691 GAPVD1Q14C86 1478 aa8.31□□□□□ -1.08
CPM-209ENST00000549691 SNAPC4Q5SXM2 1469 aa8.31□□□□□ -1.08
CPM-209ENST00000549691 RAD54L2Q9Y4B4 1467 aa8.31□□□□□ -1.08
CPM-209ENST00000549691 KCNA4P22459 653 aa8.29□□□□□ -1.08
CPM-209ENST00000549691 FGD5Q6ZNL6 1462 aa8.26□□□□□ -1.09
CPM-209ENST00000549691 PBRM1Q86U86 1689 aa8.25□□□□□ -1.09
CPM-209ENST00000549691 PIAS4Q8N2W9 510 aaPredicted RBP8.25□□□□□ -1.09
CPM-209ENST00000549691 KIF13AQ9H1H9 1805 aa8.24□□□□□ -1.09
CPM-209ENST00000549691 SUPT5HO00267 1087 aaKnown RBP8.23□□□□□ -1.09
CPM-209ENST00000549691 CUX1P39880 1505 aa8.21□□□□□ -1.1
CPM-209ENST00000549691 SHROOM2Q13796 1616 aa8.2□□□□□ -1.1
CPM-209ENST00000549691 ABCA10Q8WWZ4 1543 aa8.19□□□□□ -1.1
CPM-209ENST00000549691 ABCA5Q8WWZ7 1642 aa8.19□□□□□ -1.1
CPM-209ENST00000549691 NPM1P06748 294 aaKnown RBP eCLIP8.19□□□□□ -1.1
CPM-209ENST00000549691 GRIN2AQ12879 1464 aa8.19□□□□□ -1.1
CPM-209ENST00000549691 CEP170Q5SW79 1584 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms