RNA–Protein interactions for RNA: ENST00000548796.1

PACS2-208, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 5

Gene PACS2, Length 1,621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-208ENST00000548796 NISCHQ9Y2I1 1504 aa44.42■■■■■ 4.7
PACS2-208ENST00000548796 CCDC180Q9P1Z9 1646 aa38.65■■■■□ 3.78
PACS2-208ENST00000548796 ZCCHC6Q5VYS8 1495 aaKnown RBP37.38■■■■□ 3.57
PACS2-208ENST00000548796 DCAF1Q9Y4B6 1507 aa36.79■■■■□ 3.48
PACS2-208ENST00000548796 DCAF8L2P0C7V8 631 aa36.54■■■■□ 3.44
PACS2-208ENST00000548796 SHROOM4Q9ULL8 1493 aa36.33■■■■□ 3.41
PACS2-208ENST00000548796 MYO15BQ96JP2 1530 aa36.27■■■■□ 3.4
PACS2-208ENST00000548796 ABCC9O60706 1549 aa36.21■■■■□ 3.39
PACS2-208ENST00000548796 NACADO15069 1562 aa35.94■■■■□ 3.34
PACS2-208ENST00000548796 RB1CC1Q8TDY2 1594 aa35.55■■■■□ 3.28
PACS2-208ENST00000548796 SCRIBQ14160 1630 aa35.5■■■■□ 3.27
PACS2-208ENST00000548796 SUPT5HO00267 1087 aaKnown RBP35.13■■■■□ 3.21
PACS2-208ENST00000548796 UNC13AQ9UPW8 1703 aa34.76■■■■□ 3.16
PACS2-208ENST00000548796 RSF1Q96T23 1441 aaPredicted RBP34.55■■■■□ 3.12
PACS2-208ENST00000548796 CECR2Q9BXF3 1484 aa34.44■■■■□ 3.1
PACS2-208ENST00000548796 BICRAQ9NZM4 1560 aa34.41■■■■□ 3.1
PACS2-208ENST00000548796 BAZ1AQ9NRL2 1556 aaPredicted RBP34.31■■■■□ 3.08
PACS2-208ENST00000548796 MROH2BQ7Z745 1585 aa34.29■■■■□ 3.08
PACS2-208ENST00000548796 PABPN1Q86U42 306 aaKnown RBP eCLIP34.18■■■■□ 3.061e-6■■■■□ 24.5
PACS2-208ENST00000548796 SMARCA4P51532 1647 aa34.08■■■■□ 3.05
PACS2-208ENST00000548796 WIZO95785 1651 aa34.02■■■■□ 3.04
PACS2-208ENST00000548796 CHIC1Q5VXU3 224 aa33.8■■■■□ 3
PACS2-208ENST00000548796 TOP2AP11388 1531 aaKnown RBP33.74■■■□□ 2.99
PACS2-208ENST00000548796 PEG3Q9GZU2 1588 aa33.69■■■□□ 2.98
PACS2-208ENST00000548796 SMARCA2P51531 1590 aa33.49■■■□□ 2.95
PACS2-208ENST00000548796 ATAD2BQ9ULI0 1458 aa33.46■■■□□ 2.95
PACS2-208ENST00000548796 EIF4G1Q04637 1599 aaKnown RBP33.37■■■□□ 2.93
PACS2-208ENST00000548796 CCDC88BA6NC98 1476 aa33.36■■■□□ 2.93
PACS2-208ENST00000548796 BAZ1BQ9UIG0 1483 aaKnown RBP33.29■■■□□ 2.92
PACS2-208ENST00000548796 NCAPD3P42695 1498 aa33.14■■■□□ 2.9
PACS2-208ENST00000548796 HMGXB3Q12766 1538 aa33.13■■■□□ 2.89
PACS2-208ENST00000548796 TRIM41Q8WV44 630 aa33.07■■■□□ 2.88
PACS2-208ENST00000548796 CC2D2AQ9P2K1 1620 aa32.8■■■□□ 2.84
PACS2-208ENST00000548796 ABCC8Q09428 1581 aa32.7■■■□□ 2.83
PACS2-208ENST00000548796 WRNQ14191 1432 aaPredicted RBP eCLIP32.53■■■□□ 2.8
PACS2-208ENST00000548796 CFTRP13569 1480 aa32.47■■■□□ 2.79
PACS2-208ENST00000548796 LOC105371045A0A1W2PR82 267 aa32.47■■■□□ 2.79
PACS2-208ENST00000548796 FAM9AQ8IZU1 332 aaPredicted RBP32.4■■■□□ 2.78
PACS2-208ENST00000548796 SYNJ1O43426 1573 aa32.34■■■□□ 2.77
PACS2-208ENST00000548796 PRDM2Q13029 1718 aa32.34■■■□□ 2.77
PACS2-208ENST00000548796 CADPSQ9ULU8 1353 aa32.31■■■□□ 2.76
PACS2-208ENST00000548796 EEA1Q15075 1411 aa32.29■■■□□ 2.76
PACS2-208ENST00000548796 TOP2BQ02880 1626 aa32.24■■■□□ 2.75
PACS2-208ENST00000548796 BIVM-ERCC5R4GMW8 1640 aa32.21■■■□□ 2.75
PACS2-208ENST00000548796 SOGA1O94964 1423 aa32.17■■■□□ 2.74
PACS2-208ENST00000548796 CUX1P39880 1505 aa32.05■■■□□ 2.72
PACS2-208ENST00000548796 CSRNP3Q8WYN3 585 aa32.02■■■□□ 2.72
PACS2-208ENST00000548796 RUSC2Q8N2Y8 1516 aa32■■■□□ 2.71
PACS2-208ENST00000548796 LAMC3Q9Y6N6 1575 aa31.99■■■□□ 2.71
PACS2-208ENST00000548796 FANCD2Q9BXW9 1451 aa31.94■■■□□ 2.7
PACS2-208ENST00000548796 EHMT2Q96KQ7 1210 aa31.87■■■□□ 2.69
PACS2-208ENST00000548796 NESP48681 1621 aa31.85■■■□□ 2.69
PACS2-208ENST00000548796 GOLGA3Q08378 1498 aa31.81■■■□□ 2.68
PACS2-208ENST00000548796 KIF21BO75037 1637 aa31.8■■■□□ 2.68
PACS2-208ENST00000548796 CEP164Q9UPV0 1460 aa31.79■■■□□ 2.68
PACS2-208ENST00000548796 TNIKQ9UKE5 1360 aa31.76■■■□□ 2.68
PACS2-208ENST00000548796 DNAJC5BQ9UF47 199 aa31.75■■■□□ 2.67
PACS2-208ENST00000548796 PDS5BQ9NTI5 1447 aa31.74■■■□□ 2.67
PACS2-208ENST00000548796 DNMBPQ6XZF7 1577 aa31.73■■■□□ 2.67
PACS2-208ENST00000548796 KIF27Q86VH2 1401 aa31.72■■■□□ 2.67
PACS2-208ENST00000548796 FGD5Q6ZNL6 1462 aa31.67■■■□□ 2.66
PACS2-208ENST00000548796 TOPBP1Q92547 1522 aa31.63■■■□□ 2.65
PACS2-208ENST00000548796 UBTFP17480 764 aaKnown RBP31.62■■■□□ 2.65
PACS2-208ENST00000548796 CEP162Q5TB80 1403 aa31.57■■■□□ 2.64
PACS2-208ENST00000548796 ERICH3Q5RHP9 1530 aa31.55■■■□□ 2.64
PACS2-208ENST00000548796 PRXQ9BXM0 1461 aa31.54■■■□□ 2.64
PACS2-208ENST00000548796 CUX2O14529 1486 aa31.53■■■□□ 2.64
PACS2-208ENST00000548796 RAPGEF2Q9Y4G8 1499 aa31.51■■■□□ 2.63
PACS2-208ENST00000548796 URB2Q14146 1524 aaKnown RBP31.5■■■□□ 2.63
PACS2-208ENST00000548796 KIF21AQ7Z4S6 1674 aa31.5■■■□□ 2.63
PACS2-208ENST00000548796 POLA1P09884 1462 aaPredicted RBP31.48■■■□□ 2.63
PACS2-208ENST00000548796 ABCA10Q8WWZ4 1543 aa31.44■■■□□ 2.62
PACS2-208ENST00000548796 IGF1RP08069 1367 aa31.36■■■□□ 2.61
PACS2-208ENST00000548796 RAD54L2Q9Y4B4 1467 aa31.35■■■□□ 2.61
PACS2-208ENST00000548796 TRIM26Q12899 539 aaPredicted RBP31.31■■■□□ 2.6
PACS2-208ENST00000548796 PCGF6Q9BYE7 350 aa31.3■■■□□ 2.6
PACS2-208ENST00000548796 MRC2Q9UBG0 1479 aa31.29■■■□□ 2.6
PACS2-208ENST00000548796 CLIP1P30622 1438 aa31.28■■■□□ 2.6
PACS2-208ENST00000548796 WDR97A6NE52 1622 aa31.28■■■□□ 2.6
PACS2-208ENST00000548796 CARMIL1Q5VZK9 1371 aa31.23■■■□□ 2.59
PACS2-208ENST00000548796 CUL7Q14999 1698 aa31.15■■■□□ 2.58
PACS2-208ENST00000548796 ABCA5Q8WWZ7 1642 aa31.14■■■□□ 2.58
PACS2-208ENST00000548796 WDR62O43379 1518 aa31.11■■■□□ 2.57
PACS2-208ENST00000548796 TARBP1Q13395 1621 aaKnown RBP31.11■■■□□ 2.57
PACS2-208ENST00000548796 ERCC6Q03468 1493 aa31.07■■■□□ 2.56
PACS2-208ENST00000548796 VPS8Q8N3P4 1428 aa31.06■■■□□ 2.56
PACS2-208ENST00000548796 GAPVD1Q14C86 1478 aa31.06■■■□□ 2.56
PACS2-208ENST00000548796 TDRD9Q8NDG6 1382 aaKnown RBP31.03■■■□□ 2.56
PACS2-208ENST00000548796 IFT140Q96RY7 1462 aa30.97■■■□□ 2.55
PACS2-208ENST00000548796 RANGAP1P46060 587 aaPredicted RBP30.94■■■□□ 2.54
PACS2-208ENST00000548796 THOC2Q8NI27 1593 aaKnown RBP30.93■■■□□ 2.54
PACS2-208ENST00000548796 ARAP1Q96P48 1450 aa30.91■■■□□ 2.54
PACS2-208ENST00000548796 PPARGC1BQ86YN6 1023 aaKnown RBP30.88■■■□□ 2.53
PACS2-208ENST00000548796 ARHGAP35Q9NRY4 1499 aa30.87■■■□□ 2.53
PACS2-208ENST00000548796 PBRM1Q86U86 1689 aa30.86■■■□□ 2.53
PACS2-208ENST00000548796 CTTNBP2Q8WZ74 1663 aa30.81■■■□□ 2.52
PACS2-208ENST00000548796 APLP2Q06481 763 aa30.8■■■□□ 2.52
PACS2-208ENST00000548796 GRIN2BQ13224 1484 aa30.8■■■□□ 2.52
PACS2-208ENST00000548796 AQRO60306 1485 aaKnown RBP eCLIP30.78■■■□□ 2.52
PACS2-208ENST00000548796 FHAD1B1AJZ9 1412 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms