RNA–Protein interactions for RNA: ENST00000546425.1

HVCN1-204, Transcript of hydrogen voltage gated channel 1, humanhuman

TSL 3

Gene HVCN1, Length 788 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HVCN1-204ENST00000546425 NISCHQ9Y2I1 1504 aa31.73■■■□□ 2.67
HVCN1-204ENST00000546425 CCDC180Q9P1Z9 1646 aa28.4■■■□□ 2.14
HVCN1-204ENST00000546425 AEBP2Q6ZN18 517 aaPredicted RBP27.73■■■□□ 2.03
HVCN1-204ENST00000546425 ABCC9O60706 1549 aa27.71■■■□□ 2.03
HVCN1-204ENST00000546425 CHIC1Q5VXU3 224 aa26.73■■□□□ 1.87
HVCN1-204ENST00000546425 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
HVCN1-204ENST00000546425 NACADO15069 1562 aa26.63■■□□□ 1.85
HVCN1-204ENST00000546425 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
HVCN1-204ENST00000546425 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
HVCN1-204ENST00000546425 DCAF8L2P0C7V8 631 aa26.41■■□□□ 1.82
HVCN1-204ENST00000546425 DCAF1Q9Y4B6 1507 aa26.29■■□□□ 1.8
HVCN1-204ENST00000546425 UNC13AQ9UPW8 1703 aa26.21■■□□□ 1.79
HVCN1-204ENST00000546425 BICRAQ9NZM4 1560 aa25.88■■□□□ 1.73
HVCN1-204ENST00000546425 SCRIBQ14160 1630 aa25.81■■□□□ 1.72
HVCN1-204ENST00000546425 PABPN1Q86U42 306 aaKnown RBP eCLIP25.79■■□□□ 1.72
HVCN1-204ENST00000546425 SHROOM4Q9ULL8 1493 aa25.63■■□□□ 1.69
HVCN1-204ENST00000546425 DNAJC5BQ9UF47 199 aa25.43■■□□□ 1.66
HVCN1-204ENST00000546425 EIF4G1Q04637 1599 aaKnown RBP25.2■■□□□ 1.62
HVCN1-204ENST00000546425 CC2D2AQ9P2K1 1620 aa25.13■■□□□ 1.61
HVCN1-204ENST00000546425 CECR2Q9BXF3 1484 aa24.92■■□□□ 1.58
HVCN1-204ENST00000546425 SMARCA4P51532 1647 aa24.7■■□□□ 1.54
HVCN1-204ENST00000546425 BAZ1AQ9NRL2 1556 aaPredicted RBP24.63■■□□□ 1.53
HVCN1-204ENST00000546425 SMARCA2P51531 1590 aa24.54■■□□□ 1.52
HVCN1-204ENST00000546425 NCAPD3P42695 1498 aa24.51■■□□□ 1.51
HVCN1-204ENST00000546425 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
HVCN1-204ENST00000546425 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
HVCN1-204ENST00000546425 PEG3Q9GZU2 1588 aa24.46■■□□□ 1.51
HVCN1-204ENST00000546425 MROH2BQ7Z745 1585 aa24.44■■□□□ 1.5
HVCN1-204ENST00000546425 BAZ1BQ9UIG0 1483 aaKnown RBP24.33■■□□□ 1.49
HVCN1-204ENST00000546425 WIZO95785 1651 aa24.23■■□□□ 1.47
HVCN1-204ENST00000546425 RSF1Q96T23 1441 aaPredicted RBP24.09■■□□□ 1.45
HVCN1-204ENST00000546425 LAMC3Q9Y6N6 1575 aa23.97■■□□□ 1.43
HVCN1-204ENST00000546425 NESP48681 1621 aa23.95■■□□□ 1.43
HVCN1-204ENST00000546425 TOP2AP11388 1531 aaKnown RBP23.95■■□□□ 1.43
HVCN1-204ENST00000546425 ERCC6Q03468 1493 aa23.92■■□□□ 1.42
HVCN1-204ENST00000546425 SENP3Q9H4L4 574 aaPredicted RBP23.83■■□□□ 1.41
HVCN1-204ENST00000546425 KIF21AQ7Z4S6 1674 aa23.8■■□□□ 1.4
HVCN1-204ENST00000546425 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
HVCN1-204ENST00000546425 CUX2O14529 1486 aa23.74■■□□□ 1.39
HVCN1-204ENST00000546425 PDS5BQ9NTI5 1447 aa23.73■■□□□ 1.39
HVCN1-204ENST00000546425 THOC2Q8NI27 1593 aaKnown RBP23.71■■□□□ 1.39
HVCN1-204ENST00000546425 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
HVCN1-204ENST00000546425 CFTRP13569 1480 aa23.64■■□□□ 1.38
HVCN1-204ENST00000546425 CCDC88BA6NC98 1476 aa23.61■■□□□ 1.37
HVCN1-204ENST00000546425 CEP164Q9UPV0 1460 aa23.54■■□□□ 1.36
HVCN1-204ENST00000546425 FANCD2Q9BXW9 1451 aa23.53■■□□□ 1.36
HVCN1-204ENST00000546425 MRC2Q9UBG0 1479 aa23.52■■□□□ 1.36
HVCN1-204ENST00000546425 WDR62O43379 1518 aa23.48■■□□□ 1.35
HVCN1-204ENST00000546425 PHF23Q9BUL5 403 aaPredicted RBP23.47■■□□□ 1.35
HVCN1-204ENST00000546425 SUPT5HO00267 1087 aaKnown RBP23.32■■□□□ 1.32
HVCN1-204ENST00000546425 URB2Q14146 1524 aaKnown RBP23.31■■□□□ 1.32
HVCN1-204ENST00000546425 ABCC8Q09428 1581 aa23.17■■□□□ 1.3
HVCN1-204ENST00000546425 DNMBPQ6XZF7 1577 aa23.17■■□□□ 1.3
HVCN1-204ENST00000546425 TOPBP1Q92547 1522 aa23.16■■□□□ 1.3
HVCN1-204ENST00000546425 IFT140Q96RY7 1462 aa23.04■■□□□ 1.28
HVCN1-204ENST00000546425 DNAJC5Q9H3Z4 198 aa23.02■■□□□ 1.28
HVCN1-204ENST00000546425 TARBP1Q13395 1621 aaKnown RBP22.96■■□□□ 1.27
HVCN1-204ENST00000546425 CUX1P39880 1505 aa22.94■■□□□ 1.26
HVCN1-204ENST00000546425 POLA1P09884 1462 aaPredicted RBP22.94■■□□□ 1.26
HVCN1-204ENST00000546425 EIF4G3O43432 1585 aaKnown RBP22.91■■□□□ 1.26
HVCN1-204ENST00000546425 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
HVCN1-204ENST00000546425 FGD5Q6ZNL6 1462 aa22.88■■□□□ 1.25
HVCN1-204ENST00000546425 WDR97A6NE52 1622 aa22.82■■□□□ 1.24
HVCN1-204ENST00000546425 RAD54L2Q9Y4B4 1467 aa22.81■■□□□ 1.24
HVCN1-204ENST00000546425 BIVM-ERCC5R4GMW8 1640 aa22.81■■□□□ 1.24
HVCN1-204ENST00000546425 SOGA1O94964 1423 aa22.81■■□□□ 1.24
HVCN1-204ENST00000546425 TOP2BQ02880 1626 aa22.77■■□□□ 1.24
HVCN1-204ENST00000546425 AQRO60306 1485 aaKnown RBP eCLIP22.74■■□□□ 1.23
HVCN1-204ENST00000546425 WRNQ14191 1432 aaPredicted RBP eCLIP22.74■■□□□ 1.23
HVCN1-204ENST00000546425 SYNJ1O43426 1573 aa22.73■■□□□ 1.23
HVCN1-204ENST00000546425 CHD1O14646 1710 aa22.7■■□□□ 1.22
HVCN1-204ENST00000546425 PBRM1Q86U86 1689 aa22.68■■□□□ 1.22
HVCN1-204ENST00000546425 ABCA10Q8WWZ4 1543 aa22.67■■□□□ 1.22
HVCN1-204ENST00000546425 TDRD9Q8NDG6 1382 aaKnown RBP22.66■■□□□ 1.22
HVCN1-204ENST00000546425 OSCARQ8IYS5 282 aa22.64■■□□□ 1.21
HVCN1-204ENST00000546425 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.21
HVCN1-204ENST00000546425 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
HVCN1-204ENST00000546425 GAPVD1Q14C86 1478 aa22.58■■□□□ 1.2
HVCN1-204ENST00000546425 SNAPC4Q5SXM2 1469 aa22.58■■□□□ 1.2
HVCN1-204ENST00000546425 MAGI1Q96QZ7 1491 aaPredicted RBP22.57■■□□□ 1.2
HVCN1-204ENST00000546425 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
HVCN1-204ENST00000546425 FBLN2P98095 1184 aa22.45■■□□□ 1.18
HVCN1-204ENST00000546425 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
HVCN1-204ENST00000546425 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
HVCN1-204ENST00000546425 RIMBP3CA6NJZ7 1639 aa22.41■■□□□ 1.18
HVCN1-204ENST00000546425 RIMBP3BA6NNM3 1639 aa22.41■■□□□ 1.18
HVCN1-204ENST00000546425 RIMBP3Q9UFD9 1639 aa22.41■■□□□ 1.18
HVCN1-204ENST00000546425 CHMP7Q8WUX9 453 aaPredicted RBP22.4■■□□□ 1.18
HVCN1-204ENST00000546425 CLASP1Q7Z460 1538 aa22.37■■□□□ 1.17
HVCN1-204ENST00000546425 ARHGEF11O15085 1522 aa22.36■■□□□ 1.17
HVCN1-204ENST00000546425 GRIN2AQ12879 1464 aa22.31■■□□□ 1.16
HVCN1-204ENST00000546425 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
HVCN1-204ENST00000546425 KIF27Q86VH2 1401 aa22.26■■□□□ 1.15
HVCN1-204ENST00000546425 CUL7Q14999 1698 aa22.25■■□□□ 1.15
HVCN1-204ENST00000546425 CEP170Q5SW79 1584 aa22.23■■□□□ 1.15
HVCN1-204ENST00000546425 TRIM41Q8WV44 630 aa22.21■■□□□ 1.15
HVCN1-204ENST00000546425 NUP160Q12769 1436 aa22.21■■□□□ 1.15
HVCN1-204ENST00000546425 ARAP1Q96P48 1450 aa22.15■■□□□ 1.14
HVCN1-204ENST00000546425 IGF1RP08069 1367 aa22.13■■□□□ 1.13
HVCN1-204ENST00000546425 SHROOM2Q13796 1616 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms