RNA–Protein interactions for RNA: ENST00000544189.1

NLRC5-226, Transcript of NLR family CARD domain containing 5, humanhuman

TSL 4

Gene NLRC5, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC5-226ENST00000544189 NISCHQ9Y2I1 1504 aa17.82■□□□□ 0.44
NLRC5-226ENST00000544189 ABCC9O60706 1549 aa16.32■□□□□ 0.2
NLRC5-226ENST00000544189 CCDC180Q9P1Z9 1646 aa16.12■□□□□ 0.17
NLRC5-226ENST00000544189 AEBP2Q6ZN18 517 aaPredicted RBP16.07■□□□□ 0.16
NLRC5-226ENST00000544189 CHIC1Q5VXU3 224 aa15.82■□□□□ 0.12
NLRC5-226ENST00000544189 DNAJC5BQ9UF47 199 aa15.59■□□□□ 0.09
NLRC5-226ENST00000544189 RB1CC1Q8TDY2 1594 aa15.43■□□□□ 0.06
NLRC5-226ENST00000544189 NACADO15069 1562 aa15.28■□□□□ 0.04
NLRC5-226ENST00000544189 UNC13AQ9UPW8 1703 aa15.13■□□□□ 0.01
NLRC5-226ENST00000544189 PABPN1Q86U42 306 aaKnown RBP eCLIP15.12■□□□□ 0.01
NLRC5-226ENST00000544189 BICRAQ9NZM4 1560 aa15.06■□□□□ 0
NLRC5-226ENST00000544189 MYO15BQ96JP2 1530 aa15.03■□□□□ -0
NLRC5-226ENST00000544189 DCAF8L2P0C7V8 631 aa15□□□□□ -0.01
NLRC5-226ENST00000544189 SHROOM4Q9ULL8 1493 aa14.81□□□□□ -0.04
NLRC5-226ENST00000544189 CC2D2AQ9P2K1 1620 aa14.76□□□□□ -0.05
NLRC5-226ENST00000544189 DCAF1Q9Y4B6 1507 aa14.73□□□□□ -0.05
NLRC5-226ENST00000544189 ZCCHC6Q5VYS8 1495 aaKnown RBP14.73□□□□□ -0.05
NLRC5-226ENST00000544189 CECR2Q9BXF3 1484 aa14.73□□□□□ -0.05
NLRC5-226ENST00000544189 EIF4G1Q04637 1599 aaKnown RBP14.67□□□□□ -0.06
NLRC5-226ENST00000544189 SCRIBQ14160 1630 aa14.62□□□□□ -0.07
NLRC5-226ENST00000544189 DNAJC5Q9H3Z4 198 aa14.47□□□□□ -0.09
NLRC5-226ENST00000544189 CUX2O14529 1486 aa14.19□□□□□ -0.14
NLRC5-226ENST00000544189 NCAPD3P42695 1498 aa14.12□□□□□ -0.15
NLRC5-226ENST00000544189 ERCC6Q03468 1493 aa14.06□□□□□ -0.16
NLRC5-226ENST00000544189 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
NLRC5-226ENST00000544189 HMGXB3Q12766 1538 aa14□□□□□ -0.17
NLRC5-226ENST00000544189 NESP48681 1621 aa13.97□□□□□ -0.17
NLRC5-226ENST00000544189 SMARCA4P51532 1647 aa13.96□□□□□ -0.17
NLRC5-226ENST00000544189 SMARCA2P51531 1590 aa13.96□□□□□ -0.18
NLRC5-226ENST00000544189 PHF23Q9BUL5 403 aaPredicted RBP13.93□□□□□ -0.18
NLRC5-226ENST00000544189 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
NLRC5-226ENST00000544189 PEG3Q9GZU2 1588 aa13.86□□□□□ -0.19
NLRC5-226ENST00000544189 BAZ1BQ9UIG0 1483 aaKnown RBP13.85□□□□□ -0.19
NLRC5-226ENST00000544189 BAZ1AQ9NRL2 1556 aaPredicted RBP13.83□□□□□ -0.19
NLRC5-226ENST00000544189 LAMC3Q9Y6N6 1575 aa13.83□□□□□ -0.19
NLRC5-226ENST00000544189 KIF21AQ7Z4S6 1674 aa13.79□□□□□ -0.2
NLRC5-226ENST00000544189 MROH2BQ7Z745 1585 aa13.73□□□□□ -0.21
NLRC5-226ENST00000544189 PDS5BQ9NTI5 1447 aa13.72□□□□□ -0.21
NLRC5-226ENST00000544189 CADPSQ9ULU8 1353 aa13.66□□□□□ -0.22
NLRC5-226ENST00000544189 WDR62O43379 1518 aa13.65□□□□□ -0.22
NLRC5-226ENST00000544189 MRC2Q9UBG0 1479 aa13.64□□□□□ -0.23
NLRC5-226ENST00000544189 TRIM41Q8WV44 630 aa13.64□□□□□ -0.23
NLRC5-226ENST00000544189 SENP3Q9H4L4 574 aaPredicted RBP13.64□□□□□ -0.23
NLRC5-226ENST00000544189 WIZO95785 1651 aa13.54□□□□□ -0.24
NLRC5-226ENST00000544189 CEP164Q9UPV0 1460 aa13.52□□□□□ -0.25
NLRC5-226ENST00000544189 FANCD2Q9BXW9 1451 aa13.49□□□□□ -0.25
NLRC5-226ENST00000544189 CFTRP13569 1480 aa13.47□□□□□ -0.25
NLRC5-226ENST00000544189 OSCARQ8IYS5 282 aa13.44□□□□□ -0.26
NLRC5-226ENST00000544189 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
NLRC5-226ENST00000544189 RIMBP3CA6NJZ7 1639 aa13.36□□□□□ -0.27
NLRC5-226ENST00000544189 RIMBP3BA6NNM3 1639 aa13.36□□□□□ -0.27
NLRC5-226ENST00000544189 RIMBP3Q9UFD9 1639 aa13.36□□□□□ -0.27
NLRC5-226ENST00000544189 TOP2AP11388 1531 aaKnown RBP13.35□□□□□ -0.27
NLRC5-226ENST00000544189 RSF1Q96T23 1441 aaPredicted RBP13.34□□□□□ -0.27
NLRC5-226ENST00000544189 PRDM2Q13029 1718 aa13.31□□□□□ -0.28
NLRC5-226ENST00000544189 ZNF608Q9ULD9 1512 aaPredicted RBP13.3□□□□□ -0.28
NLRC5-226ENST00000544189 ARHGEF11O15085 1522 aa13.29□□□□□ -0.28
NLRC5-226ENST00000544189 IFT140Q96RY7 1462 aa13.28□□□□□ -0.28
NLRC5-226ENST00000544189 TOPBP1Q92547 1522 aa13.23□□□□□ -0.29
NLRC5-226ENST00000544189 EIF4G3O43432 1585 aaKnown RBP13.21□□□□□ -0.29
NLRC5-226ENST00000544189 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
NLRC5-226ENST00000544189 CHD1O14646 1710 aa13.16□□□□□ -0.3
NLRC5-226ENST00000544189 ARAP1Q96P48 1450 aa13.16□□□□□ -0.3
NLRC5-226ENST00000544189 ABCC8Q09428 1581 aa13.15□□□□□ -0.3
NLRC5-226ENST00000544189 DNMBPQ6XZF7 1577 aa13.15□□□□□ -0.3
NLRC5-226ENST00000544189 TARBP1Q13395 1621 aaKnown RBP13.15□□□□□ -0.3
NLRC5-226ENST00000544189 CYB5RLQ6IPT4 315 aa13.13□□□□□ -0.31
NLRC5-226ENST00000544189 AQRO60306 1485 aaKnown RBP eCLIP13.11□□□□□ -0.31
NLRC5-226ENST00000544189 POLA1P09884 1462 aaPredicted RBP13.08□□□□□ -0.32
NLRC5-226ENST00000544189 CLASP1Q7Z460 1538 aa13.03□□□□□ -0.32
NLRC5-226ENST00000544189 TRHP20396 242 aaPredicted RBP13.03□□□□□ -0.32
NLRC5-226ENST00000544189 RAD54L2Q9Y4B4 1467 aa13.02□□□□□ -0.33
NLRC5-226ENST00000544189 FBLN2P98095 1184 aa12.99□□□□□ -0.33
NLRC5-226ENST00000544189 WDR97A6NE52 1622 aa12.99□□□□□ -0.33
NLRC5-226ENST00000544189 SNAPC4Q5SXM2 1469 aa12.98□□□□□ -0.33
NLRC5-226ENST00000544189 TDRD9Q8NDG6 1382 aaKnown RBP12.98□□□□□ -0.33
NLRC5-226ENST00000544189 SOGA1O94964 1423 aa12.97□□□□□ -0.33
NLRC5-226ENST00000544189 FGD5Q6ZNL6 1462 aa12.95□□□□□ -0.34
NLRC5-226ENST00000544189 MAGI1Q96QZ7 1491 aaPredicted RBP12.95□□□□□ -0.34
NLRC5-226ENST00000544189 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
NLRC5-226ENST00000544189 PLPPR3Q6T4P5 718 aa12.93□□□□□ -0.34
NLRC5-226ENST00000544189 CUX1P39880 1505 aa12.91□□□□□ -0.34
NLRC5-226ENST00000544189 SYNJ2O15056 1496 aa12.91□□□□□ -0.34
NLRC5-226ENST00000544189 GRIN2BQ13224 1484 aa12.91□□□□□ -0.34
NLRC5-226ENST00000544189 CHMP7Q8WUX9 453 aaPredicted RBP12.89□□□□□ -0.35
NLRC5-226ENST00000544189 GAPVD1Q14C86 1478 aa12.86□□□□□ -0.35
NLRC5-226ENST00000544189 PBRM1Q86U86 1689 aa12.85□□□□□ -0.35
NLRC5-226ENST00000544189 ABCA5Q8WWZ7 1642 aa12.82□□□□□ -0.36
NLRC5-226ENST00000544189 ABCA10Q8WWZ4 1543 aa12.8□□□□□ -0.36
NLRC5-226ENST00000544189 ERCC6L2Q5T890 1561 aa12.8□□□□□ -0.36
NLRC5-226ENST00000544189 NUP160Q12769 1436 aa12.75□□□□□ -0.37
NLRC5-226ENST00000544189 GRIN2AQ12879 1464 aa12.75□□□□□ -0.37
NLRC5-226ENST00000544189 CEP170Q5SW79 1584 aa12.74□□□□□ -0.37
NLRC5-226ENST00000544189 SHROOM2Q13796 1616 aa12.73□□□□□ -0.37
NLRC5-226ENST00000544189 ADAMTS12P58397 1594 aa12.73□□□□□ -0.37
NLRC5-226ENST00000544189 KIF13AQ9H1H9 1805 aa12.69□□□□□ -0.38
NLRC5-226ENST00000544189 FHAD1B1AJZ9 1412 aa12.66□□□□□ -0.38
NLRC5-226ENST00000544189 WRNQ14191 1432 aaPredicted RBP eCLIP12.65□□□□□ -0.38
NLRC5-226ENST00000544189 BIVM-ERCC5R4GMW8 1640 aa12.64□□□□□ -0.39
NLRC5-226ENST00000544189 FOXD1Q16676 465 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms