RNA–Protein interactions for RNA: ENST00000543259.1

C12orf56-206, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 4

Gene C12orf56, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-206ENST00000543259 NISCHQ9Y2I1 1504 aa29.39■■■□□ 2.3
C12orf56-206ENST00000543259 CCDC180Q9P1Z9 1646 aa26.52■■□□□ 1.84
C12orf56-206ENST00000543259 ABCC9O60706 1549 aa26.49■■□□□ 1.83
C12orf56-206ENST00000543259 AEBP2Q6ZN18 517 aaPredicted RBP25.56■■□□□ 1.68
C12orf56-206ENST00000543259 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
C12orf56-206ENST00000543259 NACADO15069 1562 aa25.02■■□□□ 1.6
C12orf56-206ENST00000543259 DNAJC5BQ9UF47 199 aa24.92■■□□□ 1.58
C12orf56-206ENST00000543259 UNC13AQ9UPW8 1703 aa24.76■■□□□ 1.55
C12orf56-206ENST00000543259 MYO15BQ96JP2 1530 aa24.69■■□□□ 1.54
C12orf56-206ENST00000543259 DCAF8L2P0C7V8 631 aa24.57■■□□□ 1.52
C12orf56-206ENST00000543259 BICRAQ9NZM4 1560 aa24.55■■□□□ 1.52
C12orf56-206ENST00000543259 PABPN1Q86U42 306 aaKnown RBP eCLIP24.55■■□□□ 1.52
C12orf56-206ENST00000543259 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
C12orf56-206ENST00000543259 DCAF1Q9Y4B6 1507 aa24.32■■□□□ 1.48
C12orf56-206ENST00000543259 SHROOM4Q9ULL8 1493 aa24.2■■□□□ 1.47
C12orf56-206ENST00000543259 SCRIBQ14160 1630 aa24.08■■□□□ 1.45
C12orf56-206ENST00000543259 CHIC1Q5VXU3 224 aa24.06■■□□□ 1.44
C12orf56-206ENST00000543259 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
C12orf56-206ENST00000543259 EIF4G1Q04637 1599 aaKnown RBP23.92■■□□□ 1.42
C12orf56-206ENST00000543259 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
C12orf56-206ENST00000543259 NCAPD3P42695 1498 aa23.08■■□□□ 1.29
C12orf56-206ENST00000543259 SMARCA4P51532 1647 aa23■■□□□ 1.27
C12orf56-206ENST00000543259 ATAD2BQ9ULI0 1458 aa22.99■■□□□ 1.27
C12orf56-206ENST00000543259 HMGXB3Q12766 1538 aa22.97■■□□□ 1.27
C12orf56-206ENST00000543259 DNAJC5Q9H3Z4 198 aa22.94■■□□□ 1.26
C12orf56-206ENST00000543259 SMARCA2P51531 1590 aa22.93■■□□□ 1.26
C12orf56-206ENST00000543259 CUX2O14529 1486 aa22.92■■□□□ 1.26
C12orf56-206ENST00000543259 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
C12orf56-206ENST00000543259 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.25
C12orf56-206ENST00000543259 PEG3Q9GZU2 1588 aa22.81■■□□□ 1.24
C12orf56-206ENST00000543259 NESP48681 1621 aa22.75■■□□□ 1.23
C12orf56-206ENST00000543259 BAZ1BQ9UIG0 1483 aaKnown RBP22.74■■□□□ 1.23
C12orf56-206ENST00000543259 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
C12orf56-206ENST00000543259 THOC2Q8NI27 1593 aaKnown RBP22.65■■□□□ 1.22
C12orf56-206ENST00000543259 LAMC3Q9Y6N6 1575 aa22.61■■□□□ 1.21
C12orf56-206ENST00000543259 KIF21AQ7Z4S6 1674 aa22.53■■□□□ 1.2
C12orf56-206ENST00000543259 PDS5BQ9NTI5 1447 aa22.39■■□□□ 1.17
C12orf56-206ENST00000543259 WIZO95785 1651 aa22.38■■□□□ 1.17
C12orf56-206ENST00000543259 CADPSQ9ULU8 1353 aa22.32■■□□□ 1.16
C12orf56-206ENST00000543259 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
C12orf56-206ENST00000543259 WDR62O43379 1518 aa22.27■■□□□ 1.16
C12orf56-206ENST00000543259 RSF1Q96T23 1441 aaPredicted RBP22.17■■□□□ 1.14
C12orf56-206ENST00000543259 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
C12orf56-206ENST00000543259 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
C12orf56-206ENST00000543259 CFTRP13569 1480 aa22.1■■□□□ 1.13
C12orf56-206ENST00000543259 FANCD2Q9BXW9 1451 aa22.1■■□□□ 1.13
C12orf56-206ENST00000543259 PRDM2Q13029 1718 aa21.99■■□□□ 1.11
C12orf56-206ENST00000543259 URB2Q14146 1524 aaKnown RBP21.97■■□□□ 1.11
C12orf56-206ENST00000543259 SENP3Q9H4L4 574 aaPredicted RBP21.86■■□□□ 1.09
C12orf56-206ENST00000543259 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
C12orf56-206ENST00000543259 CCDC88BA6NC98 1476 aa21.79■■□□□ 1.08
C12orf56-206ENST00000543259 OSCARQ8IYS5 282 aa21.7■■□□□ 1.06
C12orf56-206ENST00000543259 IFT140Q96RY7 1462 aa21.7■■□□□ 1.06
C12orf56-206ENST00000543259 TOPBP1Q92547 1522 aa21.7■■□□□ 1.06
C12orf56-206ENST00000543259 ZNF608Q9ULD9 1512 aaPredicted RBP21.69■■□□□ 1.06
C12orf56-206ENST00000543259 EIF4G3O43432 1585 aaKnown RBP21.63■■□□□ 1.05
C12orf56-206ENST00000543259 DNMBPQ6XZF7 1577 aa21.63■■□□□ 1.05
C12orf56-206ENST00000543259 RIMBP3CA6NJZ7 1639 aa21.61■■□□□ 1.05
C12orf56-206ENST00000543259 RIMBP3BA6NNM3 1639 aa21.61■■□□□ 1.05
C12orf56-206ENST00000543259 RIMBP3Q9UFD9 1639 aa21.61■■□□□ 1.05
C12orf56-206ENST00000543259 ABCC8Q09428 1581 aa21.6■■□□□ 1.05
C12orf56-206ENST00000543259 TARBP1Q13395 1621 aaKnown RBP21.57■■□□□ 1.04
C12orf56-206ENST00000543259 PHF23Q9BUL5 403 aaPredicted RBP21.53■■□□□ 1.04
C12orf56-206ENST00000543259 ARHGEF11O15085 1522 aa21.51■■□□□ 1.03
C12orf56-206ENST00000543259 CHD1O14646 1710 aa21.5■■□□□ 1.03
C12orf56-206ENST00000543259 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
C12orf56-206ENST00000543259 AQRO60306 1485 aaKnown RBP eCLIP21.43■■□□□ 1.02
C12orf56-206ENST00000543259 RAD54L2Q9Y4B4 1467 aa21.35■■□□□ 1.01
C12orf56-206ENST00000543259 WDR97A6NE52 1622 aa21.35■■□□□ 1.01
C12orf56-206ENST00000543259 SUPT5HO00267 1087 aaKnown RBP21.33■■□□□ 1.01
C12orf56-206ENST00000543259 FGD5Q6ZNL6 1462 aa21.31■■□□□ 1
C12orf56-206ENST00000543259 ARAP1Q96P48 1450 aa21.31■■□□□ 1
C12orf56-206ENST00000543259 CUX1P39880 1505 aa21.29■■□□□ 1
C12orf56-206ENST00000543259 SOGA1O94964 1423 aa21.28■■□□□ 1
C12orf56-206ENST00000543259 CLASP1Q7Z460 1538 aa21.26■□□□□ 0.99
C12orf56-206ENST00000543259 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
C12orf56-206ENST00000543259 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
C12orf56-206ENST00000543259 MAGI1Q96QZ7 1491 aaPredicted RBP21.2■□□□□ 0.98
C12orf56-206ENST00000543259 CYB5RLQ6IPT4 315 aa21.18■□□□□ 0.98
C12orf56-206ENST00000543259 FBLN2P98095 1184 aa21.17■□□□□ 0.98
C12orf56-206ENST00000543259 PBRM1Q86U86 1689 aa21.17■□□□□ 0.98
C12orf56-206ENST00000543259 SYNJ1O43426 1573 aa21.16■□□□□ 0.98
C12orf56-206ENST00000543259 GRIN2BQ13224 1484 aa21.16■□□□□ 0.98
C12orf56-206ENST00000543259 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
C12orf56-206ENST00000543259 ABCA5Q8WWZ7 1642 aa21.12■□□□□ 0.97
C12orf56-206ENST00000543259 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.96
C12orf56-206ENST00000543259 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
C12orf56-206ENST00000543259 CHMP7Q8WUX9 453 aaPredicted RBP21.03■□□□□ 0.96
C12orf56-206ENST00000543259 BIVM-ERCC5R4GMW8 1640 aa20.97■□□□□ 0.95
C12orf56-206ENST00000543259 WRNQ14191 1432 aaPredicted RBP eCLIP20.97■□□□□ 0.95
C12orf56-206ENST00000543259 TOP2BQ02880 1626 aa20.96■□□□□ 0.95
C12orf56-206ENST00000543259 ADAMTS12P58397 1594 aa20.96■□□□□ 0.95
C12orf56-206ENST00000543259 TRHP20396 242 aaPredicted RBP20.95■□□□□ 0.94
C12orf56-206ENST00000543259 GRIN2AQ12879 1464 aa20.93■□□□□ 0.94
C12orf56-206ENST00000543259 CEP170Q5SW79 1584 aa20.89■□□□□ 0.94
C12orf56-206ENST00000543259 ERCC6L2Q5T890 1561 aa20.89■□□□□ 0.93
C12orf56-206ENST00000543259 NUP160Q12769 1436 aa20.87■□□□□ 0.93
C12orf56-206ENST00000543259 SHROOM2Q13796 1616 aa20.86■□□□□ 0.93
C12orf56-206ENST00000543259 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
C12orf56-206ENST00000543259 FHAD1B1AJZ9 1412 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms