RNA–Protein interactions for RNA: ENST00000542176.1

SESN3-205, Transcript of sestrin 3, humanhuman

TSL 4

Gene SESN3, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SESN3-205ENST00000542176 NISCHQ9Y2I1 1504 aa27.94■■■□□ 2.06
SESN3-205ENST00000542176 ABCC9O60706 1549 aa25.38■■□□□ 1.65
SESN3-205ENST00000542176 CCDC180Q9P1Z9 1646 aa25.24■■□□□ 1.63
SESN3-205ENST00000542176 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
SESN3-205ENST00000542176 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
SESN3-205ENST00000542176 RB1CC1Q8TDY2 1594 aa24.06■■□□□ 1.44
SESN3-205ENST00000542176 DNAJC5BQ9UF47 199 aa23.95■■□□□ 1.42
SESN3-205ENST00000542176 NACADO15069 1562 aa23.82■■□□□ 1.4
SESN3-205ENST00000542176 UNC13AQ9UPW8 1703 aa23.71■■□□□ 1.39
SESN3-205ENST00000542176 DCAF8L2P0C7V8 631 aa23.6■■□□□ 1.37
SESN3-205ENST00000542176 PABPN1Q86U42 306 aaKnown RBP eCLIP23.54■■□□□ 1.36
SESN3-205ENST00000542176 BICRAQ9NZM4 1560 aa23.43■■□□□ 1.34
SESN3-205ENST00000542176 MYO15BQ96JP2 1530 aa23.38■■□□□ 1.33
SESN3-205ENST00000542176 ZCCHC6Q5VYS8 1495 aaKnown RBP23.13■■□□□ 1.29
SESN3-205ENST00000542176 DCAF1Q9Y4B6 1507 aa23.03■■□□□ 1.28
SESN3-205ENST00000542176 SCRIBQ14160 1630 aa23.01■■□□□ 1.27
SESN3-205ENST00000542176 SHROOM4Q9ULL8 1493 aa22.96■■□□□ 1.27
SESN3-205ENST00000542176 CC2D2AQ9P2K1 1620 aa22.96■■□□□ 1.27
SESN3-205ENST00000542176 CECR2Q9BXF3 1484 aa22.85■■□□□ 1.25
SESN3-205ENST00000542176 EIF4G1Q04637 1599 aaKnown RBP22.83■■□□□ 1.25
SESN3-205ENST00000542176 DNAJC5Q9H3Z4 198 aa22.06■■□□□ 1.12
SESN3-205ENST00000542176 NCAPD3P42695 1498 aa21.95■■□□□ 1.1
SESN3-205ENST00000542176 SMARCA4P51532 1647 aa21.9■■□□□ 1.1
SESN3-205ENST00000542176 CUX2O14529 1486 aa21.9■■□□□ 1.1
SESN3-205ENST00000542176 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
SESN3-205ENST00000542176 ATAD2BQ9ULI0 1458 aa21.89■■□□□ 1.09
SESN3-205ENST00000542176 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
SESN3-205ENST00000542176 SMARCA2P51531 1590 aa21.83■■□□□ 1.09
SESN3-205ENST00000542176 NESP48681 1621 aa21.77■■□□□ 1.08
SESN3-205ENST00000542176 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
SESN3-205ENST00000542176 BAZ1BQ9UIG0 1483 aaKnown RBP21.69■■□□□ 1.06
SESN3-205ENST00000542176 THOC2Q8NI27 1593 aaKnown RBP21.64■■□□□ 1.05
SESN3-205ENST00000542176 PEG3Q9GZU2 1588 aa21.64■■□□□ 1.05
SESN3-205ENST00000542176 KIF21AQ7Z4S6 1674 aa21.59■■□□□ 1.05
SESN3-205ENST00000542176 MROH2BQ7Z745 1585 aa21.56■■□□□ 1.04
SESN3-205ENST00000542176 LAMC3Q9Y6N6 1575 aa21.55■■□□□ 1.04
SESN3-205ENST00000542176 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
SESN3-205ENST00000542176 WIZO95785 1651 aa21.35■■□□□ 1.01
SESN3-205ENST00000542176 PHF23Q9BUL5 403 aaPredicted RBP21.27■■□□□ 1
SESN3-205ENST00000542176 CADPSQ9ULU8 1353 aa21.25■□□□□ 0.99
SESN3-205ENST00000542176 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
SESN3-205ENST00000542176 WDR62O43379 1518 aa21.23■□□□□ 0.99
SESN3-205ENST00000542176 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
SESN3-205ENST00000542176 SENP3Q9H4L4 574 aaPredicted RBP21.12■□□□□ 0.97
SESN3-205ENST00000542176 TRIM41Q8WV44 630 aa21.08■□□□□ 0.97
SESN3-205ENST00000542176 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
SESN3-205ENST00000542176 CFTRP13569 1480 aa21.01■□□□□ 0.95
SESN3-205ENST00000542176 TOP2AP11388 1531 aaKnown RBP21■□□□□ 0.95
SESN3-205ENST00000542176 PRDM2Q13029 1718 aa20.99■□□□□ 0.95
SESN3-205ENST00000542176 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
SESN3-205ENST00000542176 URB2Q14146 1524 aaKnown RBP20.96■□□□□ 0.95
SESN3-205ENST00000542176 OSCARQ8IYS5 282 aa20.79■□□□□ 0.92
SESN3-205ENST00000542176 CCDC88BA6NC98 1476 aa20.74■□□□□ 0.91
SESN3-205ENST00000542176 RIMBP3CA6NJZ7 1639 aa20.73■□□□□ 0.91
SESN3-205ENST00000542176 RIMBP3BA6NNM3 1639 aa20.73■□□□□ 0.91
SESN3-205ENST00000542176 RIMBP3Q9UFD9 1639 aa20.73■□□□□ 0.91
SESN3-205ENST00000542176 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
SESN3-205ENST00000542176 IFT140Q96RY7 1462 aa20.68■□□□□ 0.9
SESN3-205ENST00000542176 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
SESN3-205ENST00000542176 EIF4G3O43432 1585 aaKnown RBP20.66■□□□□ 0.9
SESN3-205ENST00000542176 CHD1O14646 1710 aa20.61■□□□□ 0.89
SESN3-205ENST00000542176 DNMBPQ6XZF7 1577 aa20.6■□□□□ 0.89
SESN3-205ENST00000542176 ARHGEF11O15085 1522 aa20.58■□□□□ 0.89
SESN3-205ENST00000542176 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
SESN3-205ENST00000542176 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
SESN3-205ENST00000542176 AQRO60306 1485 aaKnown RBP eCLIP20.48■□□□□ 0.87
SESN3-205ENST00000542176 POLA1P09884 1462 aaPredicted RBP20.45■□□□□ 0.86
SESN3-205ENST00000542176 RAD54L2Q9Y4B4 1467 aa20.39■□□□□ 0.85
SESN3-205ENST00000542176 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
SESN3-205ENST00000542176 CYB5RLQ6IPT4 315 aa20.36■□□□□ 0.85
SESN3-205ENST00000542176 FBLN2P98095 1184 aa20.34■□□□□ 0.85
SESN3-205ENST00000542176 FGD5Q6ZNL6 1462 aa20.3■□□□□ 0.84
SESN3-205ENST00000542176 TDRD9Q8NDG6 1382 aaKnown RBP20.3■□□□□ 0.84
SESN3-205ENST00000542176 SOGA1O94964 1423 aa20.29■□□□□ 0.84
SESN3-205ENST00000542176 SNAPC4Q5SXM2 1469 aa20.29■□□□□ 0.84
SESN3-205ENST00000542176 CUX1P39880 1505 aa20.27■□□□□ 0.84
SESN3-205ENST00000542176 WDR97A6NE52 1622 aa20.27■□□□□ 0.84
SESN3-205ENST00000542176 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.83
SESN3-205ENST00000542176 PBRM1Q86U86 1689 aa20.24■□□□□ 0.83
SESN3-205ENST00000542176 TRHP20396 242 aaPredicted RBP20.21■□□□□ 0.83
SESN3-205ENST00000542176 SYNJ1O43426 1573 aa20.21■□□□□ 0.83
SESN3-205ENST00000542176 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
SESN3-205ENST00000542176 GRIN2BQ13224 1484 aa20.16■□□□□ 0.82
SESN3-205ENST00000542176 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
SESN3-205ENST00000542176 SYNJ2O15056 1496 aa20.12■□□□□ 0.81
SESN3-205ENST00000542176 ABCA5Q8WWZ7 1642 aa20.1■□□□□ 0.81
SESN3-205ENST00000542176 GAPVD1Q14C86 1478 aa20.07■□□□□ 0.8
SESN3-205ENST00000542176 ABCA10Q8WWZ4 1543 aa20.02■□□□□ 0.8
SESN3-205ENST00000542176 ERCC6L2Q5T890 1561 aa19.98■□□□□ 0.79
SESN3-205ENST00000542176 ADAMTS12P58397 1594 aa19.96■□□□□ 0.79
SESN3-205ENST00000542176 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
SESN3-205ENST00000542176 GRIN2AQ12879 1464 aa19.93■□□□□ 0.78
SESN3-205ENST00000542176 CEP170Q5SW79 1584 aa19.93■□□□□ 0.78
SESN3-205ENST00000542176 SUPT5HO00267 1087 aaKnown RBP19.89■□□□□ 0.77
SESN3-205ENST00000542176 TOP2BQ02880 1626 aa19.89■□□□□ 0.77
SESN3-205ENST00000542176 SHROOM2Q13796 1616 aa19.87■□□□□ 0.77
SESN3-205ENST00000542176 WRNQ14191 1432 aaPredicted RBP eCLIP19.86■□□□□ 0.77
SESN3-205ENST00000542176 NUP160Q12769 1436 aa19.85■□□□□ 0.77
SESN3-205ENST00000542176 KIF13AQ9H1H9 1805 aa19.79■□□□□ 0.76
SESN3-205ENST00000542176 FHAD1B1AJZ9 1412 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms