RNA–Protein interactions for RNA: ENST00000541664.5

NPIPB5-220, Transcript of nuclear pore complex interacting protein family member B5, humanhuman

TSL 3

Gene NPIPB5, Length 910 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB5-220ENST00000541664 NISCHQ9Y2I1 1504 aa19.94■□□□□ 0.78
NPIPB5-220ENST00000541664 ABCC9O60706 1549 aa18.63■□□□□ 0.57
NPIPB5-220ENST00000541664 CCDC180Q9P1Z9 1646 aa18.19■□□□□ 0.5
NPIPB5-220ENST00000541664 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
NPIPB5-220ENST00000541664 AEBP2Q6ZN18 517 aaPredicted RBP17.64■□□□□ 0.41
NPIPB5-220ENST00000541664 RB1CC1Q8TDY2 1594 aa17.52■□□□□ 0.39
NPIPB5-220ENST00000541664 NACADO15069 1562 aa17.27■□□□□ 0.35
NPIPB5-220ENST00000541664 PABPN1Q86U42 306 aaKnown RBP eCLIP17.2■□□□□ 0.34
NPIPB5-220ENST00000541664 UNC13AQ9UPW8 1703 aa17.16■□□□□ 0.34
NPIPB5-220ENST00000541664 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
NPIPB5-220ENST00000541664 DCAF8L2P0C7V8 631 aa16.91■□□□□ 0.3
NPIPB5-220ENST00000541664 MYO15BQ96JP2 1530 aa16.87■□□□□ 0.29
NPIPB5-220ENST00000541664 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
NPIPB5-220ENST00000541664 CC2D2AQ9P2K1 1620 aa16.83■□□□□ 0.28
NPIPB5-220ENST00000541664 DNAJC5Q9H3Z4 198 aa16.82■□□□□ 0.28
NPIPB5-220ENST00000541664 SHROOM4Q9ULL8 1493 aa16.79■□□□□ 0.28
NPIPB5-220ENST00000541664 CHIC1Q5VXU3 224 aa16.7■□□□□ 0.26
NPIPB5-220ENST00000541664 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
NPIPB5-220ENST00000541664 SCRIBQ14160 1630 aa16.5■□□□□ 0.23
NPIPB5-220ENST00000541664 DCAF1Q9Y4B6 1507 aa16.46■□□□□ 0.23
NPIPB5-220ENST00000541664 ZCCHC6Q5VYS8 1495 aaKnown RBP16.45■□□□□ 0.22
NPIPB5-220ENST00000541664 CUX2O14529 1486 aa16.29■□□□□ 0.2
NPIPB5-220ENST00000541664 ERCC6Q03468 1493 aa16.11■□□□□ 0.17
NPIPB5-220ENST00000541664 NCAPD3P42695 1498 aa15.93■□□□□ 0.14
NPIPB5-220ENST00000541664 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
NPIPB5-220ENST00000541664 NESP48681 1621 aa15.86■□□□□ 0.13
NPIPB5-220ENST00000541664 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
NPIPB5-220ENST00000541664 ATAD2BQ9ULI0 1458 aa15.82■□□□□ 0.12
NPIPB5-220ENST00000541664 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
NPIPB5-220ENST00000541664 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
NPIPB5-220ENST00000541664 SMARCA4P51532 1647 aa15.7■□□□□ 0.1
NPIPB5-220ENST00000541664 LAMC3Q9Y6N6 1575 aa15.69■□□□□ 0.1
NPIPB5-220ENST00000541664 KIF21AQ7Z4S6 1674 aa15.68■□□□□ 0.1
NPIPB5-220ENST00000541664 BAZ1BQ9UIG0 1483 aaKnown RBP15.64■□□□□ 0.09
NPIPB5-220ENST00000541664 PDS5BQ9NTI5 1447 aa15.56■□□□□ 0.08
NPIPB5-220ENST00000541664 PEG3Q9GZU2 1588 aa15.56■□□□□ 0.08
NPIPB5-220ENST00000541664 BAZ1AQ9NRL2 1556 aaPredicted RBP15.54■□□□□ 0.08
NPIPB5-220ENST00000541664 WDR62O43379 1518 aa15.52■□□□□ 0.07
NPIPB5-220ENST00000541664 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
NPIPB5-220ENST00000541664 CADPSQ9ULU8 1353 aa15.4■□□□□ 0.06
NPIPB5-220ENST00000541664 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
NPIPB5-220ENST00000541664 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
NPIPB5-220ENST00000541664 RIMBP3CA6NJZ7 1639 aa15.34■□□□□ 0.05
NPIPB5-220ENST00000541664 RIMBP3BA6NNM3 1639 aa15.34■□□□□ 0.05
NPIPB5-220ENST00000541664 RIMBP3Q9UFD9 1639 aa15.34■□□□□ 0.05
NPIPB5-220ENST00000541664 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
NPIPB5-220ENST00000541664 FANCD2Q9BXW9 1451 aa15.25■□□□□ 0.03
NPIPB5-220ENST00000541664 ARHGEF11O15085 1522 aa15.22■□□□□ 0.03
NPIPB5-220ENST00000541664 URB2Q14146 1524 aaKnown RBP15.18■□□□□ 0.02
NPIPB5-220ENST00000541664 WIZO95785 1651 aa15.16■□□□□ 0.02
NPIPB5-220ENST00000541664 CFTRP13569 1480 aa15.14■□□□□ 0.01
NPIPB5-220ENST00000541664 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
NPIPB5-220ENST00000541664 ARAP1Q96P48 1450 aa15.05■□□□□ -0
NPIPB5-220ENST00000541664 IFT140Q96RY7 1462 aa15.04■□□□□ -0
NPIPB5-220ENST00000541664 CYB5RLQ6IPT4 315 aa15.04■□□□□ -0
NPIPB5-220ENST00000541664 TRHP20396 242 aaPredicted RBP15.03■□□□□ -0
NPIPB5-220ENST00000541664 SENP3Q9H4L4 574 aaPredicted RBP15.03■□□□□ -0
NPIPB5-220ENST00000541664 EIF4G3O43432 1585 aaKnown RBP15.01□□□□□ -0.01
NPIPB5-220ENST00000541664 PRDM2Q13029 1718 aa15□□□□□ -0.01
NPIPB5-220ENST00000541664 CHD1O14646 1710 aa14.98□□□□□ -0.01
NPIPB5-220ENST00000541664 RSF1Q96T23 1441 aaPredicted RBP14.95□□□□□ -0.02
NPIPB5-220ENST00000541664 TOP2AP11388 1531 aaKnown RBP14.95□□□□□ -0.02
NPIPB5-220ENST00000541664 TOPBP1Q92547 1522 aa14.92□□□□□ -0.02
NPIPB5-220ENST00000541664 PHF23Q9BUL5 403 aaPredicted RBP14.87□□□□□ -0.03
NPIPB5-220ENST00000541664 TARBP1Q13395 1621 aaKnown RBP14.85□□□□□ -0.03
NPIPB5-220ENST00000541664 AQRO60306 1485 aaKnown RBP eCLIP14.83□□□□□ -0.03
NPIPB5-220ENST00000541664 DNMBPQ6XZF7 1577 aa14.83□□□□□ -0.04
NPIPB5-220ENST00000541664 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
NPIPB5-220ENST00000541664 CLASP1Q7Z460 1538 aa14.81□□□□□ -0.04
NPIPB5-220ENST00000541664 FBLN2P98095 1184 aa14.77□□□□□ -0.05
NPIPB5-220ENST00000541664 POLA1P09884 1462 aaPredicted RBP14.74□□□□□ -0.05
NPIPB5-220ENST00000541664 CCDC88BA6NC98 1476 aa14.73□□□□□ -0.05
NPIPB5-220ENST00000541664 SYNJ1O43426 1573 aa14.72□□□□□ -0.05
NPIPB5-220ENST00000541664 SNAPC4Q5SXM2 1469 aa14.7□□□□□ -0.06
NPIPB5-220ENST00000541664 WDR97A6NE52 1622 aa14.67□□□□□ -0.06
NPIPB5-220ENST00000541664 RAD54L2Q9Y4B4 1467 aa14.66□□□□□ -0.06
NPIPB5-220ENST00000541664 GAPVD1Q14C86 1478 aa14.64□□□□□ -0.07
NPIPB5-220ENST00000541664 MAGI1Q96QZ7 1491 aaPredicted RBP14.64□□□□□ -0.07
NPIPB5-220ENST00000541664 TDRD9Q8NDG6 1382 aaKnown RBP14.64□□□□□ -0.07
NPIPB5-220ENST00000541664 SYNJ2O15056 1496 aa14.6□□□□□ -0.07
NPIPB5-220ENST00000541664 SOGA1O94964 1423 aa14.59□□□□□ -0.07
NPIPB5-220ENST00000541664 CHMP7Q8WUX9 453 aaPredicted RBP14.59□□□□□ -0.07
NPIPB5-220ENST00000541664 GRIN2BQ13224 1484 aa14.57□□□□□ -0.08
NPIPB5-220ENST00000541664 FGD5Q6ZNL6 1462 aa14.57□□□□□ -0.08
NPIPB5-220ENST00000541664 PBRM1Q86U86 1689 aa14.53□□□□□ -0.08
NPIPB5-220ENST00000541664 ERCC6L2Q5T890 1561 aa14.52□□□□□ -0.08
NPIPB5-220ENST00000541664 KIF13AQ9H1H9 1805 aa14.5□□□□□ -0.09
NPIPB5-220ENST00000541664 CUX1P39880 1505 aa14.47□□□□□ -0.09
NPIPB5-220ENST00000541664 CEP170Q5SW79 1584 aa14.44□□□□□ -0.1
NPIPB5-220ENST00000541664 ILDR1Q86SU0 546 aaPredicted RBP14.44□□□□□ -0.1
NPIPB5-220ENST00000541664 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
NPIPB5-220ENST00000541664 SHROOM2Q13796 1616 aa14.41□□□□□ -0.1
NPIPB5-220ENST00000541664 GRIN2AQ12879 1464 aa14.4□□□□□ -0.1
NPIPB5-220ENST00000541664 NUP160Q12769 1436 aa14.38□□□□□ -0.11
NPIPB5-220ENST00000541664 ADAMTS12P58397 1594 aa14.37□□□□□ -0.11
NPIPB5-220ENST00000541664 ABCA10Q8WWZ4 1543 aa14.36□□□□□ -0.11
NPIPB5-220ENST00000541664 KDM4FA0A1W2PPD8 638 aa14.34□□□□□ -0.11
NPIPB5-220ENST00000541664 ABCC10Q5T3U5 1492 aa14.32□□□□□ -0.12
NPIPB5-220ENST00000541664 DIP2BQ9P265 1576 aa14.31□□□□□ -0.12
NPIPB5-220ENST00000541664 KDM6BO15054 1643 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms