RNA–Protein interactions for RNA: ENST00000541249.5

SCNN1A-216, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 5

Gene SCNN1A, Length 432 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-216ENST00000541249 NISCHQ9Y2I1 1504 aa27.24■■□□□ 1.95
SCNN1A-216ENST00000541249 ABCC9O60706 1549 aa25.43■■□□□ 1.66
SCNN1A-216ENST00000541249 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
SCNN1A-216ENST00000541249 DNAJC5BQ9UF47 199 aa24.46■■□□□ 1.51
SCNN1A-216ENST00000541249 RB1CC1Q8TDY2 1594 aa23.91■■□□□ 1.42
SCNN1A-216ENST00000541249 NACADO15069 1562 aa23.57■■□□□ 1.36
SCNN1A-216ENST00000541249 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
SCNN1A-216ENST00000541249 UNC13AQ9UPW8 1703 aa23.36■■□□□ 1.33
SCNN1A-216ENST00000541249 DCAF8L2P0C7V8 631 aa23.29■■□□□ 1.32
SCNN1A-216ENST00000541249 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
SCNN1A-216ENST00000541249 MYO15BQ96JP2 1530 aa23.01■■□□□ 1.27
SCNN1A-216ENST00000541249 DNAJC5Q9H3Z4 198 aa22.99■■□□□ 1.27
SCNN1A-216ENST00000541249 CECR2Q9BXF3 1484 aa22.98■■□□□ 1.27
SCNN1A-216ENST00000541249 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
SCNN1A-216ENST00000541249 SHROOM4Q9ULL8 1493 aa22.85■■□□□ 1.25
SCNN1A-216ENST00000541249 EIF4G1Q04637 1599 aaKnown RBP22.72■■□□□ 1.23
SCNN1A-216ENST00000541249 AEBP2Q6ZN18 517 aaPredicted RBP22.61■■□□□ 1.21
SCNN1A-216ENST00000541249 SCRIBQ14160 1630 aa22.51■■□□□ 1.19
SCNN1A-216ENST00000541249 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
SCNN1A-216ENST00000541249 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
SCNN1A-216ENST00000541249 ZCCHC6Q5VYS8 1495 aaKnown RBP22.43■■□□□ 1.18
SCNN1A-216ENST00000541249 CUX2O14529 1486 aa22.22■■□□□ 1.15
SCNN1A-216ENST00000541249 ERCC6Q03468 1493 aa22.03■■□□□ 1.12
SCNN1A-216ENST00000541249 NCAPD3P42695 1498 aa21.77■■□□□ 1.07
SCNN1A-216ENST00000541249 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
SCNN1A-216ENST00000541249 NESP48681 1621 aa21.64■■□□□ 1.05
SCNN1A-216ENST00000541249 ATAD2BQ9ULI0 1458 aa21.6■■□□□ 1.05
SCNN1A-216ENST00000541249 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
SCNN1A-216ENST00000541249 HMGXB3Q12766 1538 aa21.55■■□□□ 1.04
SCNN1A-216ENST00000541249 SMARCA2P51531 1590 aa21.51■■□□□ 1.03
SCNN1A-216ENST00000541249 SMARCA4P51532 1647 aa21.4■■□□□ 1.02
SCNN1A-216ENST00000541249 LAMC3Q9Y6N6 1575 aa21.39■■□□□ 1.01
SCNN1A-216ENST00000541249 BAZ1BQ9UIG0 1483 aaKnown RBP21.36■■□□□ 1.01
SCNN1A-216ENST00000541249 KIF21AQ7Z4S6 1674 aa21.35■■□□□ 1.01
SCNN1A-216ENST00000541249 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
SCNN1A-216ENST00000541249 PEG3Q9GZU2 1588 aa21.2■□□□□ 0.98
SCNN1A-216ENST00000541249 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
SCNN1A-216ENST00000541249 MRC2Q9UBG0 1479 aa21.15■□□□□ 0.98
SCNN1A-216ENST00000541249 WDR62O43379 1518 aa21.12■□□□□ 0.97
SCNN1A-216ENST00000541249 OSCARQ8IYS5 282 aa21.08■□□□□ 0.97
SCNN1A-216ENST00000541249 CADPSQ9ULU8 1353 aa21.07■□□□□ 0.96
SCNN1A-216ENST00000541249 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
SCNN1A-216ENST00000541249 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
SCNN1A-216ENST00000541249 RIMBP3CA6NJZ7 1639 aa20.89■□□□□ 0.93
SCNN1A-216ENST00000541249 RIMBP3BA6NNM3 1639 aa20.89■□□□□ 0.93
SCNN1A-216ENST00000541249 RIMBP3Q9UFD9 1639 aa20.89■□□□□ 0.93
SCNN1A-216ENST00000541249 FANCD2Q9BXW9 1451 aa20.83■□□□□ 0.93
SCNN1A-216ENST00000541249 ARHGEF11O15085 1522 aa20.74■□□□□ 0.91
SCNN1A-216ENST00000541249 URB2Q14146 1524 aaKnown RBP20.71■□□□□ 0.91
SCNN1A-216ENST00000541249 WIZO95785 1651 aa20.7■□□□□ 0.9
SCNN1A-216ENST00000541249 CFTRP13569 1480 aa20.69■□□□□ 0.9
SCNN1A-216ENST00000541249 TRHP20396 242 aaPredicted RBP20.64■□□□□ 0.89
SCNN1A-216ENST00000541249 CYB5RLQ6IPT4 315 aa20.63■□□□□ 0.89
SCNN1A-216ENST00000541249 ZNF608Q9ULD9 1512 aaPredicted RBP20.57■□□□□ 0.88
SCNN1A-216ENST00000541249 IFT140Q96RY7 1462 aa20.53■□□□□ 0.88
SCNN1A-216ENST00000541249 ARAP1Q96P48 1450 aa20.5■□□□□ 0.87
SCNN1A-216ENST00000541249 PRDM2Q13029 1718 aa20.43■□□□□ 0.86
SCNN1A-216ENST00000541249 EIF4G3O43432 1585 aaKnown RBP20.42■□□□□ 0.86
SCNN1A-216ENST00000541249 CHD1O14646 1710 aa20.41■□□□□ 0.86
SCNN1A-216ENST00000541249 TOP2AP11388 1531 aaKnown RBP20.39■□□□□ 0.85
SCNN1A-216ENST00000541249 RSF1Q96T23 1441 aaPredicted RBP20.39■□□□□ 0.85
SCNN1A-216ENST00000541249 TOPBP1Q92547 1522 aa20.36■□□□□ 0.85
SCNN1A-216ENST00000541249 FBLN2P98095 1184 aa20.3■□□□□ 0.84
SCNN1A-216ENST00000541249 AQRO60306 1485 aaKnown RBP eCLIP20.29■□□□□ 0.84
SCNN1A-216ENST00000541249 ABCC8Q09428 1581 aa20.28■□□□□ 0.84
SCNN1A-216ENST00000541249 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
SCNN1A-216ENST00000541249 DNMBPQ6XZF7 1577 aa20.23■□□□□ 0.83
SCNN1A-216ENST00000541249 CCDC88BA6NC98 1476 aa20.16■□□□□ 0.82
SCNN1A-216ENST00000541249 CLASP1Q7Z460 1538 aa20.15■□□□□ 0.82
SCNN1A-216ENST00000541249 POLA1P09884 1462 aaPredicted RBP20.11■□□□□ 0.81
SCNN1A-216ENST00000541249 SYNJ1O43426 1573 aa20.08■□□□□ 0.81
SCNN1A-216ENST00000541249 SNAPC4Q5SXM2 1469 aa20.06■□□□□ 0.8
SCNN1A-216ENST00000541249 TDRD9Q8NDG6 1382 aaKnown RBP20.06■□□□□ 0.8
SCNN1A-216ENST00000541249 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
SCNN1A-216ENST00000541249 CHMP7Q8WUX9 453 aaPredicted RBP20.04■□□□□ 0.8
SCNN1A-216ENST00000541249 SOGA1O94964 1423 aa20■□□□□ 0.79
SCNN1A-216ENST00000541249 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
SCNN1A-216ENST00000541249 WDR97A6NE52 1622 aa19.99■□□□□ 0.79
SCNN1A-216ENST00000541249 MAGI1Q96QZ7 1491 aaPredicted RBP19.99■□□□□ 0.79
SCNN1A-216ENST00000541249 SYNJ2O15056 1496 aa19.93■□□□□ 0.78
SCNN1A-216ENST00000541249 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
SCNN1A-216ENST00000541249 FGD5Q6ZNL6 1462 aa19.88■□□□□ 0.77
SCNN1A-216ENST00000541249 PBRM1Q86U86 1689 aa19.79■□□□□ 0.76
SCNN1A-216ENST00000541249 PHF23Q9BUL5 403 aaPredicted RBP19.78■□□□□ 0.76
SCNN1A-216ENST00000541249 ERCC6L2Q5T890 1561 aa19.78■□□□□ 0.76
SCNN1A-216ENST00000541249 CUX1P39880 1505 aa19.76■□□□□ 0.75
SCNN1A-216ENST00000541249 KIF13AQ9H1H9 1805 aa19.75■□□□□ 0.75
SCNN1A-216ENST00000541249 ILDR1Q86SU0 546 aaPredicted RBP19.75■□□□□ 0.75
SCNN1A-216ENST00000541249 CEP170Q5SW79 1584 aa19.69■□□□□ 0.74
SCNN1A-216ENST00000541249 GRIN2AQ12879 1464 aa19.66■□□□□ 0.74
SCNN1A-216ENST00000541249 ABCA5Q8WWZ7 1642 aa19.65■□□□□ 0.74
SCNN1A-216ENST00000541249 NUP160Q12769 1436 aa19.62■□□□□ 0.73
SCNN1A-216ENST00000541249 KDM4FA0A1W2PPD8 638 aa19.62■□□□□ 0.73
SCNN1A-216ENST00000541249 ABCA10Q8WWZ4 1543 aa19.61■□□□□ 0.73
SCNN1A-216ENST00000541249 SHROOM2Q13796 1616 aa19.61■□□□□ 0.73
SCNN1A-216ENST00000541249 FAM69CQ0P6D2 419 aa19.57■□□□□ 0.72
SCNN1A-216ENST00000541249 ADAMTS12P58397 1594 aa19.56■□□□□ 0.72
SCNN1A-216ENST00000541249 ABCC10Q5T3U5 1492 aa19.55■□□□□ 0.72
SCNN1A-216ENST00000541249 KDM6BO15054 1643 aa19.5■□□□□ 0.71
SCNN1A-216ENST00000541249 PRG4Q92954 1404 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms