RNA–Protein interactions for RNA: ENST00000540678.2

FLT1-203, Transcript of fms related tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene FLT1, Length 1,927 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLT1-203ENST00000540678 NISCHQ9Y2I1 1504 aa19.4■□□□□ 0.7
FLT1-203ENST00000540678 ABCC9O60706 1549 aa17.66■□□□□ 0.42
FLT1-203ENST00000540678 CCDC180Q9P1Z9 1646 aa17.64■□□□□ 0.41
FLT1-203ENST00000540678 RB1CC1Q8TDY2 1594 aa16.82■□□□□ 0.28
FLT1-203ENST00000540678 NACADO15069 1562 aa16.64■□□□□ 0.25
FLT1-203ENST00000540678 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
FLT1-203ENST00000540678 UNC13AQ9UPW8 1703 aa16.49■□□□□ 0.23
FLT1-203ENST00000540678 DCAF8L2P0C7V8 631 aa16.37■□□□□ 0.21
FLT1-203ENST00000540678 MYO15BQ96JP2 1530 aa16.32■□□□□ 0.2
FLT1-203ENST00000540678 PABPN1Q86U42 306 aaKnown RBP eCLIP16.31■□□□□ 0.2
FLT1-203ENST00000540678 BICRAQ9NZM4 1560 aa16.26■□□□□ 0.19
FLT1-203ENST00000540678 SHROOM4Q9ULL8 1493 aa16.12■□□□□ 0.17
FLT1-203ENST00000540678 ZCCHC6Q5VYS8 1495 aaKnown RBP16.08■□□□□ 0.16
FLT1-203ENST00000540678 DCAF1Q9Y4B6 1507 aa16.05■□□□□ 0.16
FLT1-203ENST00000540678 SCRIBQ14160 1630 aa16.01■□□□□ 0.15
FLT1-203ENST00000540678 CHIC1Q5VXU3 224 aa16■□□□□ 0.15
FLT1-203ENST00000540678 CC2D2AQ9P2K1 1620 aa15.99■□□□□ 0.15
FLT1-203ENST00000540678 CECR2Q9BXF3 1484 aa15.93■□□□□ 0.14
FLT1-203ENST00000540678 EIF4G1Q04637 1599 aaKnown RBP15.91■□□□□ 0.14
FLT1-203ENST00000540678 AEBP2Q6ZN18 517 aaPredicted RBP15.45■□□□□ 0.06
FLT1-203ENST00000540678 DNAJC5Q9H3Z4 198 aa15.37■□□□□ 0.05
FLT1-203ENST00000540678 CUX2O14529 1486 aa15.34■□□□□ 0.05
FLT1-203ENST00000540678 ERCC6Q03468 1493 aa15.32■□□□□ 0.04
FLT1-203ENST00000540678 NCAPD3P42695 1498 aa15.27■□□□□ 0.03
FLT1-203ENST00000540678 SMARCA2P51531 1590 aa15.25■□□□□ 0.03
FLT1-203ENST00000540678 HMGXB3Q12766 1538 aa15.25■□□□□ 0.03
FLT1-203ENST00000540678 SMARCA4P51532 1647 aa15.24■□□□□ 0.03
FLT1-203ENST00000540678 ATAD2BQ9ULI0 1458 aa15.21■□□□□ 0.03
FLT1-203ENST00000540678 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
FLT1-203ENST00000540678 BAZ1BQ9UIG0 1483 aaKnown RBP15.12■□□□□ 0.01
FLT1-203ENST00000540678 NESP48681 1621 aa15.09■□□□□ 0.01
FLT1-203ENST00000540678 THOC2Q8NI27 1593 aaKnown RBP15.08■□□□□ 0.01
FLT1-203ENST00000540678 PEG3Q9GZU2 1588 aa15.07■□□□□ 0
FLT1-203ENST00000540678 LAMC3Q9Y6N6 1575 aa15.06■□□□□ 0
FLT1-203ENST00000540678 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
FLT1-203ENST00000540678 SUPT5HO00267 1087 aaKnown RBP14.98□□□□□ -0.01
FLT1-203ENST00000540678 MROH2BQ7Z745 1585 aa14.93□□□□□ -0.02
FLT1-203ENST00000540678 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
FLT1-203ENST00000540678 MRC2Q9UBG0 1479 aa14.83□□□□□ -0.03
FLT1-203ENST00000540678 WDR62O43379 1518 aa14.81□□□□□ -0.04
FLT1-203ENST00000540678 WIZO95785 1651 aa14.8□□□□□ -0.04
FLT1-203ENST00000540678 CADPSQ9ULU8 1353 aa14.79□□□□□ -0.04
FLT1-203ENST00000540678 CEP164Q9UPV0 1460 aa14.75□□□□□ -0.05
FLT1-203ENST00000540678 RSF1Q96T23 1441 aaPredicted RBP14.74□□□□□ -0.05
FLT1-203ENST00000540678 TRIM41Q8WV44 630 aa14.69□□□□□ -0.06
FLT1-203ENST00000540678 PRDM2Q13029 1718 aa14.68□□□□□ -0.06
FLT1-203ENST00000540678 FANCD2Q9BXW9 1451 aa14.68□□□□□ -0.06
FLT1-203ENST00000540678 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
FLT1-203ENST00000540678 CFTRP13569 1480 aa14.61□□□□□ -0.07
FLT1-203ENST00000540678 URB2Q14146 1524 aaKnown RBP14.55□□□□□ -0.08
FLT1-203ENST00000540678 OSCARQ8IYS5 282 aa14.49□□□□□ -0.09
FLT1-203ENST00000540678 RIMBP3CA6NJZ7 1639 aa14.46□□□□□ -0.1
FLT1-203ENST00000540678 RIMBP3BA6NNM3 1639 aa14.46□□□□□ -0.1
FLT1-203ENST00000540678 RIMBP3Q9UFD9 1639 aa14.46□□□□□ -0.1
FLT1-203ENST00000540678 IFT140Q96RY7 1462 aa14.44□□□□□ -0.1
FLT1-203ENST00000540678 EIF4G3O43432 1585 aaKnown RBP14.41□□□□□ -0.1
FLT1-203ENST00000540678 TOPBP1Q92547 1522 aa14.39□□□□□ -0.11
FLT1-203ENST00000540678 ZNF608Q9ULD9 1512 aaPredicted RBP14.38□□□□□ -0.11
FLT1-203ENST00000540678 CHD1O14646 1710 aa14.37□□□□□ -0.11
FLT1-203ENST00000540678 CCDC88BA6NC98 1476 aa14.37□□□□□ -0.11
FLT1-203ENST00000540678 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
FLT1-203ENST00000540678 DNMBPQ6XZF7 1577 aa14.37□□□□□ -0.11
FLT1-203ENST00000540678 ARHGEF11O15085 1522 aa14.36□□□□□ -0.11
FLT1-203ENST00000540678 PHF23Q9BUL5 403 aaPredicted RBP14.29□□□□□ -0.12
FLT1-203ENST00000540678 TARBP1Q13395 1621 aaKnown RBP14.29□□□□□ -0.12
FLT1-203ENST00000540678 WDR97A6NE52 1622 aa14.22□□□□□ -0.13
FLT1-203ENST00000540678 POLA1P09884 1462 aaPredicted RBP14.22□□□□□ -0.13
FLT1-203ENST00000540678 AQRO60306 1485 aaKnown RBP eCLIP14.2□□□□□ -0.14
FLT1-203ENST00000540678 ARAP1Q96P48 1450 aa14.19□□□□□ -0.14
FLT1-203ENST00000540678 FBLN2P98095 1184 aa14.15□□□□□ -0.14
FLT1-203ENST00000540678 CYB5RLQ6IPT4 315 aa14.15□□□□□ -0.14
FLT1-203ENST00000540678 SYNJ1O43426 1573 aa14.15□□□□□ -0.14
FLT1-203ENST00000540678 SNAPC4Q5SXM2 1469 aa14.13□□□□□ -0.15
FLT1-203ENST00000540678 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
FLT1-203ENST00000540678 PBRM1Q86U86 1689 aa14.12□□□□□ -0.15
FLT1-203ENST00000540678 CLASP1Q7Z460 1538 aa14.12□□□□□ -0.15
FLT1-203ENST00000540678 FGD5Q6ZNL6 1462 aa14.12□□□□□ -0.15
FLT1-203ENST00000540678 SOGA1O94964 1423 aa14.11□□□□□ -0.15
FLT1-203ENST00000540678 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
FLT1-203ENST00000540678 MAGI1Q96QZ7 1491 aaPredicted RBP14.11□□□□□ -0.15
FLT1-203ENST00000540678 TDRD9Q8NDG6 1382 aaKnown RBP14.08□□□□□ -0.16
FLT1-203ENST00000540678 GRIN2BQ13224 1484 aa14.06□□□□□ -0.16
FLT1-203ENST00000540678 CUX1P39880 1505 aa14.06□□□□□ -0.16
FLT1-203ENST00000540678 SYNJ2O15056 1496 aa14.04□□□□□ -0.16
FLT1-203ENST00000540678 CHMP7Q8WUX9 453 aaPredicted RBP14.02□□□□□ -0.16
FLT1-203ENST00000540678 ABCA5Q8WWZ7 1642 aa14□□□□□ -0.17
FLT1-203ENST00000540678 GAPVD1Q14C86 1478 aa13.98□□□□□ -0.17
FLT1-203ENST00000540678 ABCA10Q8WWZ4 1543 aa13.94□□□□□ -0.18
FLT1-203ENST00000540678 ADAMTS12P58397 1594 aa13.92□□□□□ -0.18
FLT1-203ENST00000540678 LOC105371045A0A1W2PR82 267 aa13.9□□□□□ -0.18
FLT1-203ENST00000540678 GRIN2AQ12879 1464 aa13.89□□□□□ -0.19
FLT1-203ENST00000540678 BIVM-ERCC5R4GMW8 1640 aa13.88□□□□□ -0.19
FLT1-203ENST00000540678 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.19
FLT1-203ENST00000540678 CEP170Q5SW79 1584 aa13.85□□□□□ -0.19
FLT1-203ENST00000540678 SHROOM2Q13796 1616 aa13.84□□□□□ -0.19
FLT1-203ENST00000540678 TOP2BQ02880 1626 aa13.84□□□□□ -0.19
FLT1-203ENST00000540678 ERCC6L2Q5T890 1561 aa13.84□□□□□ -0.19
FLT1-203ENST00000540678 NUP160Q12769 1436 aa13.81□□□□□ -0.2
FLT1-203ENST00000540678 FAM9AQ8IZU1 332 aaPredicted RBP13.81□□□□□ -0.2
FLT1-203ENST00000540678 ERICH3Q5RHP9 1530 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms