RNA–Protein interactions for RNA: ENST00000540103.1

NPIPB4-212, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-212ENST00000540103 NISCHQ9Y2I1 1504 aa20.01■□□□□ 0.79
NPIPB4-212ENST00000540103 CCDC180Q9P1Z9 1646 aa17.85■□□□□ 0.45
NPIPB4-212ENST00000540103 ABCC9O60706 1549 aa17.78■□□□□ 0.44
NPIPB4-212ENST00000540103 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
NPIPB4-212ENST00000540103 NACADO15069 1562 aa16.89■□□□□ 0.29
NPIPB4-212ENST00000540103 DCAF8L2P0C7V8 631 aa16.8■□□□□ 0.28
NPIPB4-212ENST00000540103 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
NPIPB4-212ENST00000540103 MYO15BQ96JP2 1530 aa16.73■□□□□ 0.27
NPIPB4-212ENST00000540103 PABPN1Q86U42 306 aaKnown RBP eCLIP16.62■□□□□ 0.25
NPIPB4-212ENST00000540103 UNC13AQ9UPW8 1703 aa16.6■□□□□ 0.25
NPIPB4-212ENST00000540103 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
NPIPB4-212ENST00000540103 BICRAQ9NZM4 1560 aa16.54■□□□□ 0.24
NPIPB4-212ENST00000540103 DCAF1Q9Y4B6 1507 aa16.54■□□□□ 0.24
NPIPB4-212ENST00000540103 AEBP2Q6ZN18 517 aaPredicted RBP16.53■□□□□ 0.24
NPIPB4-212ENST00000540103 SHROOM4Q9ULL8 1493 aa16.25■□□□□ 0.19
NPIPB4-212ENST00000540103 SCRIBQ14160 1630 aa16.25■□□□□ 0.19
NPIPB4-212ENST00000540103 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.16
NPIPB4-212ENST00000540103 EIF4G1Q04637 1599 aaKnown RBP16.06■□□□□ 0.16
NPIPB4-212ENST00000540103 CECR2Q9BXF3 1484 aa16.01■□□□□ 0.15
NPIPB4-212ENST00000540103 CHIC1Q5VXU3 224 aa15.9■□□□□ 0.14
NPIPB4-212ENST00000540103 NCAPD3P42695 1498 aa15.65■□□□□ 0.1
NPIPB4-212ENST00000540103 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
NPIPB4-212ENST00000540103 SMARCA4P51532 1647 aa15.55■□□□□ 0.08
NPIPB4-212ENST00000540103 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
NPIPB4-212ENST00000540103 BAZ1AQ9NRL2 1556 aaPredicted RBP15.47■□□□□ 0.07
NPIPB4-212ENST00000540103 HMGXB3Q12766 1538 aa15.47■□□□□ 0.07
NPIPB4-212ENST00000540103 PEG3Q9GZU2 1588 aa15.44■□□□□ 0.06
NPIPB4-212ENST00000540103 MROH2BQ7Z745 1585 aa15.43■□□□□ 0.06
NPIPB4-212ENST00000540103 BAZ1BQ9UIG0 1483 aaKnown RBP15.37■□□□□ 0.05
NPIPB4-212ENST00000540103 NESP48681 1621 aa15.34■□□□□ 0.05
NPIPB4-212ENST00000540103 CUX2O14529 1486 aa15.28■□□□□ 0.04
NPIPB4-212ENST00000540103 ERCC6Q03468 1493 aa15.28■□□□□ 0.04
NPIPB4-212ENST00000540103 DNAJC5Q9H3Z4 198 aa15.26■□□□□ 0.03
NPIPB4-212ENST00000540103 WIZO95785 1651 aa15.22■□□□□ 0.03
NPIPB4-212ENST00000540103 LAMC3Q9Y6N6 1575 aa15.2■□□□□ 0.02
NPIPB4-212ENST00000540103 CADPSQ9ULU8 1353 aa15.16■□□□□ 0.02
NPIPB4-212ENST00000540103 RSF1Q96T23 1441 aaPredicted RBP15.16■□□□□ 0.02
NPIPB4-212ENST00000540103 THOC2Q8NI27 1593 aaKnown RBP15.13■□□□□ 0.01
NPIPB4-212ENST00000540103 PDS5BQ9NTI5 1447 aa15.12■□□□□ 0.01
NPIPB4-212ENST00000540103 KIF21AQ7Z4S6 1674 aa15.09■□□□□ 0.01
NPIPB4-212ENST00000540103 TOP2AP11388 1531 aaKnown RBP15.01□□□□□ -0.01
NPIPB4-212ENST00000540103 CFTRP13569 1480 aa15.01□□□□□ -0.01
NPIPB4-212ENST00000540103 MRC2Q9UBG0 1479 aa14.97□□□□□ -0.01
NPIPB4-212ENST00000540103 WDR62O43379 1518 aa14.95□□□□□ -0.02
NPIPB4-212ENST00000540103 FANCD2Q9BXW9 1451 aa14.94□□□□□ -0.02
NPIPB4-212ENST00000540103 CEP164Q9UPV0 1460 aa14.91□□□□□ -0.02
NPIPB4-212ENST00000540103 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
NPIPB4-212ENST00000540103 URB2Q14146 1524 aaKnown RBP14.84□□□□□ -0.03
NPIPB4-212ENST00000540103 PRDM2Q13029 1718 aa14.77□□□□□ -0.05
NPIPB4-212ENST00000540103 TOPBP1Q92547 1522 aa14.68□□□□□ -0.06
NPIPB4-212ENST00000540103 ZNF608Q9ULD9 1512 aaPredicted RBP14.65□□□□□ -0.06
NPIPB4-212ENST00000540103 IFT140Q96RY7 1462 aa14.64□□□□□ -0.07
NPIPB4-212ENST00000540103 OSCARQ8IYS5 282 aa14.64□□□□□ -0.07
NPIPB4-212ENST00000540103 ABCC8Q09428 1581 aa14.64□□□□□ -0.07
NPIPB4-212ENST00000540103 DNMBPQ6XZF7 1577 aa14.6□□□□□ -0.07
NPIPB4-212ENST00000540103 TARBP1Q13395 1621 aaKnown RBP14.55□□□□□ -0.08
NPIPB4-212ENST00000540103 POLA1P09884 1462 aaPredicted RBP14.54□□□□□ -0.08
NPIPB4-212ENST00000540103 AQRO60306 1485 aaKnown RBP eCLIP14.52□□□□□ -0.08
NPIPB4-212ENST00000540103 TRIM41Q8WV44 630 aa14.52□□□□□ -0.09
NPIPB4-212ENST00000540103 EIF4G3O43432 1585 aaKnown RBP14.5□□□□□ -0.09
NPIPB4-212ENST00000540103 RAD54L2Q9Y4B4 1467 aa14.5□□□□□ -0.09
NPIPB4-212ENST00000540103 SUPT5HO00267 1087 aaKnown RBP14.49□□□□□ -0.09
NPIPB4-212ENST00000540103 CUX1P39880 1505 aa14.48□□□□□ -0.09
NPIPB4-212ENST00000540103 SOGA1O94964 1423 aa14.48□□□□□ -0.09
NPIPB4-212ENST00000540103 TDRD9Q8NDG6 1382 aaKnown RBP14.45□□□□□ -0.1
NPIPB4-212ENST00000540103 FGD5Q6ZNL6 1462 aa14.44□□□□□ -0.1
NPIPB4-212ENST00000540103 RIMBP3CA6NJZ7 1639 aa14.4□□□□□ -0.1
NPIPB4-212ENST00000540103 RIMBP3BA6NNM3 1639 aa14.4□□□□□ -0.1
NPIPB4-212ENST00000540103 RIMBP3Q9UFD9 1639 aa14.4□□□□□ -0.1
NPIPB4-212ENST00000540103 CHD1O14646 1710 aa14.38□□□□□ -0.11
NPIPB4-212ENST00000540103 ARHGEF11O15085 1522 aa14.37□□□□□ -0.11
NPIPB4-212ENST00000540103 WDR97A6NE52 1622 aa14.37□□□□□ -0.11
NPIPB4-212ENST00000540103 FBLN2P98095 1184 aa14.35□□□□□ -0.11
NPIPB4-212ENST00000540103 SNAPC4Q5SXM2 1469 aa14.33□□□□□ -0.12
NPIPB4-212ENST00000540103 GRIN2BQ13224 1484 aa14.32□□□□□ -0.12
NPIPB4-212ENST00000540103 ABCA10Q8WWZ4 1543 aa14.31□□□□□ -0.12
NPIPB4-212ENST00000540103 MAGI1Q96QZ7 1491 aaPredicted RBP14.31□□□□□ -0.12
NPIPB4-212ENST00000540103 CYB5RLQ6IPT4 315 aa14.29□□□□□ -0.12
NPIPB4-212ENST00000540103 GAPVD1Q14C86 1478 aa14.29□□□□□ -0.12
NPIPB4-212ENST00000540103 CHMP7Q8WUX9 453 aaPredicted RBP14.28□□□□□ -0.12
NPIPB4-212ENST00000540103 CLASP1Q7Z460 1538 aa14.26□□□□□ -0.13
NPIPB4-212ENST00000540103 ABCA5Q8WWZ7 1642 aa14.26□□□□□ -0.13
NPIPB4-212ENST00000540103 SYNJ2O15056 1496 aa14.25□□□□□ -0.13
NPIPB4-212ENST00000540103 ARAP1Q96P48 1450 aa14.25□□□□□ -0.13
NPIPB4-212ENST00000540103 TOP2BQ02880 1626 aa14.24□□□□□ -0.13
NPIPB4-212ENST00000540103 WRNQ14191 1432 aaPredicted RBP eCLIP14.24□□□□□ -0.13
NPIPB4-212ENST00000540103 BIVM-ERCC5R4GMW8 1640 aa14.23□□□□□ -0.13
NPIPB4-212ENST00000540103 PBRM1Q86U86 1689 aa14.23□□□□□ -0.13
NPIPB4-212ENST00000540103 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
NPIPB4-212ENST00000540103 GRIN2AQ12879 1464 aa14.13□□□□□ -0.15
NPIPB4-212ENST00000540103 NUP160Q12769 1436 aa14.13□□□□□ -0.15
NPIPB4-212ENST00000540103 FHAD1B1AJZ9 1412 aa14.12□□□□□ -0.15
NPIPB4-212ENST00000540103 ADAMTS12P58397 1594 aa14.12□□□□□ -0.15
NPIPB4-212ENST00000540103 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
NPIPB4-212ENST00000540103 CEP170Q5SW79 1584 aa14.09□□□□□ -0.15
NPIPB4-212ENST00000540103 ERCC6L2Q5T890 1561 aa14.07□□□□□ -0.16
NPIPB4-212ENST00000540103 TRHP20396 242 aaPredicted RBP14.03□□□□□ -0.16
NPIPB4-212ENST00000540103 PHF23Q9BUL5 403 aaPredicted RBP14.03□□□□□ -0.16
NPIPB4-212ENST00000540103 IGF1RP08069 1367 aa14.03□□□□□ -0.16
NPIPB4-212ENST00000540103 SHROOM2Q13796 1616 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms