RNA–Protein interactions for RNA: ENST00000539516.1

SLC24A1-210, Transcript of solute carrier family 24 member 1, humanhuman

TSL 3

Gene SLC24A1, Length 813 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC24A1-210ENST00000539516 NISCHQ9Y2I1 1504 aa19.78■□□□□ 0.76
SLC24A1-210ENST00000539516 AEBP2Q6ZN18 517 aaPredicted RBP18.13■□□□□ 0.49
SLC24A1-210ENST00000539516 ABCC9O60706 1549 aa17.95■□□□□ 0.46
SLC24A1-210ENST00000539516 CCDC180Q9P1Z9 1646 aa17.93■□□□□ 0.46
SLC24A1-210ENST00000539516 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
SLC24A1-210ENST00000539516 RB1CC1Q8TDY2 1594 aa17.05■□□□□ 0.32
SLC24A1-210ENST00000539516 NACADO15069 1562 aa16.87■□□□□ 0.29
SLC24A1-210ENST00000539516 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
SLC24A1-210ENST00000539516 UNC13AQ9UPW8 1703 aa16.79■□□□□ 0.28
SLC24A1-210ENST00000539516 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
SLC24A1-210ENST00000539516 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
SLC24A1-210ENST00000539516 MYO15BQ96JP2 1530 aa16.57■□□□□ 0.24
SLC24A1-210ENST00000539516 DCAF8L2P0C7V8 631 aa16.56■□□□□ 0.24
SLC24A1-210ENST00000539516 ZCCHC6Q5VYS8 1495 aaKnown RBP16.43■□□□□ 0.22
SLC24A1-210ENST00000539516 SCRIBQ14160 1630 aa16.34■□□□□ 0.21
SLC24A1-210ENST00000539516 DCAF1Q9Y4B6 1507 aa16.33■□□□□ 0.2
SLC24A1-210ENST00000539516 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
SLC24A1-210ENST00000539516 CC2D2AQ9P2K1 1620 aa16.25■□□□□ 0.19
SLC24A1-210ENST00000539516 EIF4G1Q04637 1599 aaKnown RBP16.18■□□□□ 0.18
SLC24A1-210ENST00000539516 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
SLC24A1-210ENST00000539516 PHF23Q9BUL5 403 aaPredicted RBP15.61■□□□□ 0.09
SLC24A1-210ENST00000539516 SMARCA4P51532 1647 aa15.54■□□□□ 0.08
SLC24A1-210ENST00000539516 CUX2O14529 1486 aa15.52■□□□□ 0.07
SLC24A1-210ENST00000539516 NCAPD3P42695 1498 aa15.52■□□□□ 0.07
SLC24A1-210ENST00000539516 HMGXB3Q12766 1538 aa15.51■□□□□ 0.07
SLC24A1-210ENST00000539516 ERCC6Q03468 1493 aa15.5■□□□□ 0.07
SLC24A1-210ENST00000539516 ATAD2BQ9ULI0 1458 aa15.5■□□□□ 0.07
SLC24A1-210ENST00000539516 DNAJC5Q9H3Z4 198 aa15.49■□□□□ 0.07
SLC24A1-210ENST00000539516 SMARCA2P51531 1590 aa15.47■□□□□ 0.07
SLC24A1-210ENST00000539516 SENP3Q9H4L4 574 aaPredicted RBP15.47■□□□□ 0.07
SLC24A1-210ENST00000539516 NESP48681 1621 aa15.4■□□□□ 0.06
SLC24A1-210ENST00000539516 BAZ1AQ9NRL2 1556 aaPredicted RBP15.39■□□□□ 0.05
SLC24A1-210ENST00000539516 THOC2Q8NI27 1593 aaKnown RBP15.37■□□□□ 0.05
SLC24A1-210ENST00000539516 BAZ1BQ9UIG0 1483 aaKnown RBP15.37■□□□□ 0.05
SLC24A1-210ENST00000539516 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
SLC24A1-210ENST00000539516 KIF21AQ7Z4S6 1674 aa15.3■□□□□ 0.04
SLC24A1-210ENST00000539516 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
SLC24A1-210ENST00000539516 MROH2BQ7Z745 1585 aa15.27■□□□□ 0.03
SLC24A1-210ENST00000539516 WIZO95785 1651 aa15.12■□□□□ 0.01
SLC24A1-210ENST00000539516 PDS5BQ9NTI5 1447 aa15.09■□□□□ 0.01
SLC24A1-210ENST00000539516 WDR62O43379 1518 aa15.07■□□□□ 0
SLC24A1-210ENST00000539516 MRC2Q9UBG0 1479 aa15.07■□□□□ 0
SLC24A1-210ENST00000539516 CADPSQ9ULU8 1353 aa15.01□□□□□ -0.01
SLC24A1-210ENST00000539516 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
SLC24A1-210ENST00000539516 FANCD2Q9BXW9 1451 aa14.93□□□□□ -0.02
SLC24A1-210ENST00000539516 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
SLC24A1-210ENST00000539516 PRDM2Q13029 1718 aa14.9□□□□□ -0.02
SLC24A1-210ENST00000539516 CFTRP13569 1480 aa14.87□□□□□ -0.03
SLC24A1-210ENST00000539516 URB2Q14146 1524 aaKnown RBP14.85□□□□□ -0.03
SLC24A1-210ENST00000539516 RSF1Q96T23 1441 aaPredicted RBP14.83□□□□□ -0.03
SLC24A1-210ENST00000539516 TRIM41Q8WV44 630 aa14.83□□□□□ -0.04
SLC24A1-210ENST00000539516 EIF4G3O43432 1585 aaKnown RBP14.68□□□□□ -0.06
SLC24A1-210ENST00000539516 RIMBP3CA6NJZ7 1639 aa14.68□□□□□ -0.06
SLC24A1-210ENST00000539516 RIMBP3BA6NNM3 1639 aa14.68□□□□□ -0.06
SLC24A1-210ENST00000539516 RIMBP3Q9UFD9 1639 aa14.68□□□□□ -0.06
SLC24A1-210ENST00000539516 ZNF608Q9ULD9 1512 aaPredicted RBP14.67□□□□□ -0.06
SLC24A1-210ENST00000539516 CCDC88BA6NC98 1476 aa14.66□□□□□ -0.06
SLC24A1-210ENST00000539516 TOPBP1Q92547 1522 aa14.65□□□□□ -0.06
SLC24A1-210ENST00000539516 IFT140Q96RY7 1462 aa14.64□□□□□ -0.07
SLC24A1-210ENST00000539516 DNMBPQ6XZF7 1577 aa14.62□□□□□ -0.07
SLC24A1-210ENST00000539516 CHD1O14646 1710 aa14.61□□□□□ -0.07
SLC24A1-210ENST00000539516 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
SLC24A1-210ENST00000539516 ARHGEF11O15085 1522 aa14.59□□□□□ -0.07
SLC24A1-210ENST00000539516 TARBP1Q13395 1621 aaKnown RBP14.57□□□□□ -0.08
SLC24A1-210ENST00000539516 PLPPR3Q6T4P5 718 aa14.52□□□□□ -0.09
SLC24A1-210ENST00000539516 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
SLC24A1-210ENST00000539516 POLA1P09884 1462 aaPredicted RBP14.5□□□□□ -0.09
SLC24A1-210ENST00000539516 AQRO60306 1485 aaKnown RBP eCLIP14.46□□□□□ -0.09
SLC24A1-210ENST00000539516 ARAP1Q96P48 1450 aa14.44□□□□□ -0.1
SLC24A1-210ENST00000539516 WDR97A6NE52 1622 aa14.42□□□□□ -0.1
SLC24A1-210ENST00000539516 RAD54L2Q9Y4B4 1467 aa14.42□□□□□ -0.1
SLC24A1-210ENST00000539516 SNAPC4Q5SXM2 1469 aa14.39□□□□□ -0.11
SLC24A1-210ENST00000539516 FGD5Q6ZNL6 1462 aa14.39□□□□□ -0.11
SLC24A1-210ENST00000539516 CLASP1Q7Z460 1538 aa14.39□□□□□ -0.11
SLC24A1-210ENST00000539516 CUX1P39880 1505 aa14.37□□□□□ -0.11
SLC24A1-210ENST00000539516 PBRM1Q86U86 1689 aa14.37□□□□□ -0.11
SLC24A1-210ENST00000539516 SYNJ1O43426 1573 aa14.33□□□□□ -0.12
SLC24A1-210ENST00000539516 TDRD9Q8NDG6 1382 aaKnown RBP14.33□□□□□ -0.12
SLC24A1-210ENST00000539516 SOGA1O94964 1423 aa14.32□□□□□ -0.12
SLC24A1-210ENST00000539516 MAGI1Q96QZ7 1491 aaPredicted RBP14.31□□□□□ -0.12
SLC24A1-210ENST00000539516 FBLN2P98095 1184 aa14.3□□□□□ -0.12
SLC24A1-210ENST00000539516 FOXD1Q16676 465 aa14.3□□□□□ -0.12
SLC24A1-210ENST00000539516 CYB5RLQ6IPT4 315 aa14.3□□□□□ -0.12
SLC24A1-210ENST00000539516 ABCA5Q8WWZ7 1642 aa14.29□□□□□ -0.12
SLC24A1-210ENST00000539516 GRIN2BQ13224 1484 aa14.27□□□□□ -0.12
SLC24A1-210ENST00000539516 SYNJ2O15056 1496 aa14.25□□□□□ -0.13
SLC24A1-210ENST00000539516 ADAMTS12P58397 1594 aa14.21□□□□□ -0.14
SLC24A1-210ENST00000539516 GAPVD1Q14C86 1478 aa14.2□□□□□ -0.14
SLC24A1-210ENST00000539516 ABCA10Q8WWZ4 1543 aa14.2□□□□□ -0.14
SLC24A1-210ENST00000539516 TRHP20396 242 aaPredicted RBP14.19□□□□□ -0.14
SLC24A1-210ENST00000539516 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
SLC24A1-210ENST00000539516 ERCC6L2Q5T890 1561 aa14.16□□□□□ -0.14
SLC24A1-210ENST00000539516 BIVM-ERCC5R4GMW8 1640 aa14.15□□□□□ -0.14
SLC24A1-210ENST00000539516 CEP170Q5SW79 1584 aa14.14□□□□□ -0.15
SLC24A1-210ENST00000539516 GRIN2AQ12879 1464 aa14.12□□□□□ -0.15
SLC24A1-210ENST00000539516 TOP2BQ02880 1626 aa14.11□□□□□ -0.15
SLC24A1-210ENST00000539516 SHROOM2Q13796 1616 aa14.1□□□□□ -0.15
SLC24A1-210ENST00000539516 NUP160Q12769 1436 aa14.07□□□□□ -0.16
SLC24A1-210ENST00000539516 WRNQ14191 1432 aaPredicted RBP eCLIP14.05□□□□□ -0.16
SLC24A1-210ENST00000539516 ERICH3Q5RHP9 1530 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms