RNA–Protein interactions for RNA: ENST00000537041.5

QKI-208, Transcript of QKI, KH domain containing RNA binding, humanhuman

TSL 5

Gene QKI, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
QKI-208ENST00000537041 NISCHQ9Y2I1 1504 aa24.51■■□□□ 1.51
QKI-208ENST00000537041 ABCC9O60706 1549 aa22.29■■□□□ 1.16
QKI-208ENST00000537041 CCDC180Q9P1Z9 1646 aa22.02■■□□□ 1.11
QKI-208ENST00000537041 DNAJC5BQ9UF47 199 aa21.14■□□□□ 0.97
QKI-208ENST00000537041 RB1CC1Q8TDY2 1594 aa21.06■□□□□ 0.96
QKI-208ENST00000537041 NACADO15069 1562 aa20.88■□□□□ 0.93
QKI-208ENST00000537041 PABPN1Q86U42 306 aaKnown RBP eCLIP20.74■□□□□ 0.91
QKI-208ENST00000537041 DCAF8L2P0C7V8 631 aa20.73■□□□□ 0.91
QKI-208ENST00000537041 UNC13AQ9UPW8 1703 aa20.61■□□□□ 0.89
QKI-208ENST00000537041 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
QKI-208ENST00000537041 BICRAQ9NZM4 1560 aa20.54■□□□□ 0.88
QKI-208ENST00000537041 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
QKI-208ENST00000537041 ZCCHC6Q5VYS8 1495 aaKnown RBP20.29■□□□□ 0.84
QKI-208ENST00000537041 DCAF1Q9Y4B6 1507 aa20.2■□□□□ 0.82
QKI-208ENST00000537041 SHROOM4Q9ULL8 1493 aa20.15■□□□□ 0.82
QKI-208ENST00000537041 SCRIBQ14160 1630 aa20.12■□□□□ 0.81
QKI-208ENST00000537041 CC2D2AQ9P2K1 1620 aa20.1■□□□□ 0.81
QKI-208ENST00000537041 CECR2Q9BXF3 1484 aa20.08■□□□□ 0.81
QKI-208ENST00000537041 EIF4G1Q04637 1599 aaKnown RBP20.01■□□□□ 0.79
QKI-208ENST00000537041 CHIC1Q5VXU3 224 aa19.93■□□□□ 0.78
QKI-208ENST00000537041 DNAJC5Q9H3Z4 198 aa19.47■□□□□ 0.71
QKI-208ENST00000537041 NCAPD3P42695 1498 aa19.31■□□□□ 0.68
QKI-208ENST00000537041 ATAD2BQ9ULI0 1458 aa19.24■□□□□ 0.67
QKI-208ENST00000537041 CUX2O14529 1486 aa19.23■□□□□ 0.67
QKI-208ENST00000537041 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
QKI-208ENST00000537041 SMARCA4P51532 1647 aa19.15■□□□□ 0.66
QKI-208ENST00000537041 HMGXB3Q12766 1538 aa19.13■□□□□ 0.65
QKI-208ENST00000537041 SMARCA2P51531 1590 aa19.12■□□□□ 0.65
QKI-208ENST00000537041 NESP48681 1621 aa19.11■□□□□ 0.65
QKI-208ENST00000537041 BAZ1BQ9UIG0 1483 aaKnown RBP19.01■□□□□ 0.63
QKI-208ENST00000537041 BAZ1AQ9NRL2 1556 aaPredicted RBP19■□□□□ 0.63
QKI-208ENST00000537041 PEG3Q9GZU2 1588 aa18.96■□□□□ 0.63
QKI-208ENST00000537041 THOC2Q8NI27 1593 aaKnown RBP18.93■□□□□ 0.62
QKI-208ENST00000537041 MROH2BQ7Z745 1585 aa18.92■□□□□ 0.62
QKI-208ENST00000537041 LAMC3Q9Y6N6 1575 aa18.86■□□□□ 0.61
QKI-208ENST00000537041 KIF21AQ7Z4S6 1674 aa18.8■□□□□ 0.6
QKI-208ENST00000537041 PDS5BQ9NTI5 1447 aa18.76■□□□□ 0.59
QKI-208ENST00000537041 CADPSQ9ULU8 1353 aa18.7■□□□□ 0.58
QKI-208ENST00000537041 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
QKI-208ENST00000537041 WIZO95785 1651 aa18.65■□□□□ 0.58
QKI-208ENST00000537041 WDR62O43379 1518 aa18.62■□□□□ 0.57
QKI-208ENST00000537041 TRIM41Q8WV44 630 aa18.54■□□□□ 0.56
QKI-208ENST00000537041 CEP164Q9UPV0 1460 aa18.52■□□□□ 0.56
QKI-208ENST00000537041 FANCD2Q9BXW9 1451 aa18.51■□□□□ 0.55
QKI-208ENST00000537041 CFTRP13569 1480 aa18.46■□□□□ 0.55
QKI-208ENST00000537041 RSF1Q96T23 1441 aaPredicted RBP18.45■□□□□ 0.54
QKI-208ENST00000537041 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.54
QKI-208ENST00000537041 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.54
QKI-208ENST00000537041 OSCARQ8IYS5 282 aa18.31■□□□□ 0.52
QKI-208ENST00000537041 ZNF608Q9ULD9 1512 aaPredicted RBP18.21■□□□□ 0.51
QKI-208ENST00000537041 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
QKI-208ENST00000537041 PRDM2Q13029 1718 aa18.19■□□□□ 0.5
QKI-208ENST00000537041 IFT140Q96RY7 1462 aa18.15■□□□□ 0.5
QKI-208ENST00000537041 TOPBP1Q92547 1522 aa18.14■□□□□ 0.49
QKI-208ENST00000537041 RIMBP3CA6NJZ7 1639 aa18.13■□□□□ 0.49
QKI-208ENST00000537041 RIMBP3BA6NNM3 1639 aa18.13■□□□□ 0.49
QKI-208ENST00000537041 RIMBP3Q9UFD9 1639 aa18.13■□□□□ 0.49
QKI-208ENST00000537041 ARHGEF11O15085 1522 aa18.07■□□□□ 0.48
QKI-208ENST00000537041 EIF4G3O43432 1585 aaKnown RBP18.06■□□□□ 0.48
QKI-208ENST00000537041 DNMBPQ6XZF7 1577 aa18.03■□□□□ 0.48
QKI-208ENST00000537041 AQRO60306 1485 aaKnown RBP eCLIP18.01■□□□□ 0.476e-9■■■■□ 25.1
QKI-208ENST00000537041 ABCC8Q09428 1581 aa18■□□□□ 0.47
QKI-208ENST00000537041 TARBP1Q13395 1621 aaKnown RBP17.99■□□□□ 0.47
QKI-208ENST00000537041 POLA1P09884 1462 aaPredicted RBP17.95■□□□□ 0.46
QKI-208ENST00000537041 CHD1O14646 1710 aa17.94■□□□□ 0.46
QKI-208ENST00000537041 CYB5RLQ6IPT4 315 aa17.93■□□□□ 0.46
QKI-208ENST00000537041 ARAP1Q96P48 1450 aa17.91■□□□□ 0.46
QKI-208ENST00000537041 RAD54L2Q9Y4B4 1467 aa17.9■□□□□ 0.46
QKI-208ENST00000537041 FBLN2P98095 1184 aa17.87■□□□□ 0.45
QKI-208ENST00000537041 TDRD9Q8NDG6 1382 aaKnown RBP17.86■□□□□ 0.45
QKI-208ENST00000537041 SOGA1O94964 1423 aa17.83■□□□□ 0.45
QKI-208ENST00000537041 SNAPC4Q5SXM2 1469 aa17.81■□□□□ 0.44
QKI-208ENST00000537041 FGD5Q6ZNL6 1462 aa17.81■□□□□ 0.44
QKI-208ENST00000537041 CUX1P39880 1505 aa17.78■□□□□ 0.44
QKI-208ENST00000537041 CLASP1Q7Z460 1538 aa17.77■□□□□ 0.43
QKI-208ENST00000537041 TRHP20396 242 aaPredicted RBP17.76■□□□□ 0.43
QKI-208ENST00000537041 WDR97A6NE52 1622 aa17.72■□□□□ 0.43
QKI-208ENST00000537041 MAGI1Q96QZ7 1491 aaPredicted RBP17.71■□□□□ 0.43
QKI-208ENST00000537041 GRIN2BQ13224 1484 aa17.7■□□□□ 0.42
QKI-208ENST00000537041 CHMP7Q8WUX9 453 aaPredicted RBP17.7■□□□□ 0.42
QKI-208ENST00000537041 SYNJ1O43426 1573 aa17.68■□□□□ 0.42
QKI-208ENST00000537041 SYNJ2O15056 1496 aa17.67■□□□□ 0.42
QKI-208ENST00000537041 GAPVD1Q14C86 1478 aa17.62■□□□□ 0.41
QKI-208ENST00000537041 PBRM1Q86U86 1689 aa17.6■□□□□ 0.41
QKI-208ENST00000537041 ABCA5Q8WWZ7 1642 aa17.58■□□□□ 0.4
QKI-208ENST00000537041 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
QKI-208ENST00000537041 PHF23Q9BUL5 403 aaPredicted RBP17.52■□□□□ 0.4
QKI-208ENST00000537041 ERCC6L2Q5T890 1561 aa17.52■□□□□ 0.39
QKI-208ENST00000537041 GRIN2AQ12879 1464 aa17.49■□□□□ 0.39
QKI-208ENST00000537041 ADAMTS12P58397 1594 aa17.46■□□□□ 0.39
QKI-208ENST00000537041 CEP170Q5SW79 1584 aa17.46■□□□□ 0.39
QKI-208ENST00000537041 SUPT5HO00267 1087 aaKnown RBP17.46■□□□□ 0.39
QKI-208ENST00000537041 NUP160Q12769 1436 aa17.46■□□□□ 0.39
QKI-208ENST00000537041 WRNQ14191 1432 aaPredicted RBP eCLIP17.45■□□□□ 0.38
QKI-208ENST00000537041 SENP3Q9H4L4 574 aaPredicted RBP17.43■□□□□ 0.38
QKI-208ENST00000537041 TOP2BQ02880 1626 aa17.39■□□□□ 0.38
QKI-208ENST00000537041 BIVM-ERCC5R4GMW8 1640 aa17.39■□□□□ 0.37
QKI-208ENST00000537041 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
QKI-208ENST00000537041 SHROOM2Q13796 1616 aa17.38■□□□□ 0.37
QKI-208ENST00000537041 ERICH3Q5RHP9 1530 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms