RNA–Protein interactions for RNA: ENST00000535012.1

HIP1R-203, Transcript of huntingtin interacting protein 1 related, humanhuman

TSL 3

Gene HIP1R, Length 924 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1R-203ENST00000535012 NISCHQ9Y2I1 1504 aa29.81■■■□□ 2.36
HIP1R-203ENST00000535012 ABCC9O60706 1549 aa27.56■■■□□ 2
HIP1R-203ENST00000535012 CCDC180Q9P1Z9 1646 aa26.83■■□□□ 1.88
HIP1R-203ENST00000535012 DNAJC5BQ9UF47 199 aa26.39■■□□□ 1.82
HIP1R-203ENST00000535012 RB1CC1Q8TDY2 1594 aa25.93■■□□□ 1.74
HIP1R-203ENST00000535012 PABPN1Q86U42 306 aaKnown RBP eCLIP25.56■■□□□ 1.68
HIP1R-203ENST00000535012 NACADO15069 1562 aa25.56■■□□□ 1.68
HIP1R-203ENST00000535012 DCAF8L2P0C7V8 631 aa25.43■■□□□ 1.66
HIP1R-203ENST00000535012 UNC13AQ9UPW8 1703 aa25.21■■□□□ 1.63
HIP1R-203ENST00000535012 BICRAQ9NZM4 1560 aa25.08■■□□□ 1.61
HIP1R-203ENST00000535012 MYO15BQ96JP2 1530 aa24.93■■□□□ 1.58
HIP1R-203ENST00000535012 CECR2Q9BXF3 1484 aa24.91■■□□□ 1.58
HIP1R-203ENST00000535012 ZCCHC6Q5VYS8 1495 aaKnown RBP24.84■■□□□ 1.57
HIP1R-203ENST00000535012 DNAJC5Q9H3Z4 198 aa24.84■■□□□ 1.57
HIP1R-203ENST00000535012 CC2D2AQ9P2K1 1620 aa24.83■■□□□ 1.56
HIP1R-203ENST00000535012 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
HIP1R-203ENST00000535012 DCAF1Q9Y4B6 1507 aa24.73■■□□□ 1.55
HIP1R-203ENST00000535012 EIF4G1Q04637 1599 aaKnown RBP24.6■■□□□ 1.53
HIP1R-203ENST00000535012 SCRIBQ14160 1630 aa24.42■■□□□ 1.5
HIP1R-203ENST00000535012 AEBP2Q6ZN18 517 aaPredicted RBP24.06■■□□□ 1.44
HIP1R-203ENST00000535012 CUX2O14529 1486 aa24.06■■□□□ 1.44
HIP1R-203ENST00000535012 ERCC6Q03468 1493 aa23.93■■□□□ 1.42
HIP1R-203ENST00000535012 NCAPD3P42695 1498 aa23.58■■□□□ 1.37
HIP1R-203ENST00000535012 TRIM41Q8WV44 630 aa23.56■■□□□ 1.36
HIP1R-203ENST00000535012 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
HIP1R-203ENST00000535012 NESP48681 1621 aa23.42■■□□□ 1.34
HIP1R-203ENST00000535012 ATAD2BQ9ULI0 1458 aa23.4■■□□□ 1.34
HIP1R-203ENST00000535012 SMARCA2P51531 1590 aa23.35■■□□□ 1.33
HIP1R-203ENST00000535012 HMGXB3Q12766 1538 aa23.34■■□□□ 1.33
HIP1R-203ENST00000535012 THOC2Q8NI27 1593 aaKnown RBP23.31■■□□□ 1.32
HIP1R-203ENST00000535012 SMARCA4P51532 1647 aa23.2■■□□□ 1.3
HIP1R-203ENST00000535012 BAZ1BQ9UIG0 1483 aaKnown RBP23.2■■□□□ 1.3
HIP1R-203ENST00000535012 LAMC3Q9Y6N6 1575 aa23.19■■□□□ 1.3
HIP1R-203ENST00000535012 PDS5BQ9NTI5 1447 aa23.14■■□□□ 1.29
HIP1R-203ENST00000535012 BAZ1AQ9NRL2 1556 aaPredicted RBP23.12■■□□□ 1.29
HIP1R-203ENST00000535012 KIF21AQ7Z4S6 1674 aa23.09■■□□□ 1.29
HIP1R-203ENST00000535012 PEG3Q9GZU2 1588 aa22.94■■□□□ 1.26
HIP1R-203ENST00000535012 MRC2Q9UBG0 1479 aa22.94■■□□□ 1.26
HIP1R-203ENST00000535012 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
HIP1R-203ENST00000535012 OSCARQ8IYS5 282 aa22.9■■□□□ 1.26
HIP1R-203ENST00000535012 CADPSQ9ULU8 1353 aa22.87■■□□□ 1.25
HIP1R-203ENST00000535012 WDR62O43379 1518 aa22.87■■□□□ 1.25
HIP1R-203ENST00000535012 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
HIP1R-203ENST00000535012 RSF1Q96T23 1441 aaPredicted RBP22.71■■□□□ 1.23
HIP1R-203ENST00000535012 WIZO95785 1651 aa22.65■■□□□ 1.22
HIP1R-203ENST00000535012 FANCD2Q9BXW9 1451 aa22.61■■□□□ 1.21
HIP1R-203ENST00000535012 RIMBP3CA6NJZ7 1639 aa22.58■■□□□ 1.21
HIP1R-203ENST00000535012 RIMBP3BA6NNM3 1639 aa22.58■■□□□ 1.21
HIP1R-203ENST00000535012 RIMBP3Q9UFD9 1639 aa22.58■■□□□ 1.21
HIP1R-203ENST00000535012 TOP2AP11388 1531 aaKnown RBP22.48■■□□□ 1.19
HIP1R-203ENST00000535012 TRHP20396 242 aaPredicted RBP22.47■■□□□ 1.19
HIP1R-203ENST00000535012 ARHGEF11O15085 1522 aa22.46■■□□□ 1.19
HIP1R-203ENST00000535012 CFTRP13569 1480 aa22.42■■□□□ 1.18
HIP1R-203ENST00000535012 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
HIP1R-203ENST00000535012 CYB5RLQ6IPT4 315 aa22.41■■□□□ 1.18
HIP1R-203ENST00000535012 IFT140Q96RY7 1462 aa22.29■■□□□ 1.16
HIP1R-203ENST00000535012 ZNF608Q9ULD9 1512 aaPredicted RBP22.26■■□□□ 1.15
HIP1R-203ENST00000535012 CCDC88BA6NC98 1476 aa22.19■■□□□ 1.14
HIP1R-203ENST00000535012 ARAP1Q96P48 1450 aa22.15■■□□□ 1.14
HIP1R-203ENST00000535012 FBLN2P98095 1184 aa22.13■■□□□ 1.13
HIP1R-203ENST00000535012 EIF4G3O43432 1585 aaKnown RBP22.12■■□□□ 1.13
HIP1R-203ENST00000535012 PRDM2Q13029 1718 aa22.11■■□□□ 1.13
HIP1R-203ENST00000535012 TOPBP1Q92547 1522 aa22.08■■□□□ 1.13
HIP1R-203ENST00000535012 CHD1O14646 1710 aa22.08■■□□□ 1.12
HIP1R-203ENST00000535012 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
HIP1R-203ENST00000535012 ABCC8Q09428 1581 aa22.05■■□□□ 1.12
HIP1R-203ENST00000535012 AQRO60306 1485 aaKnown RBP eCLIP22■■□□□ 1.11
HIP1R-203ENST00000535012 DNMBPQ6XZF7 1577 aa21.95■■□□□ 1.1
HIP1R-203ENST00000535012 TARBP1Q13395 1621 aaKnown RBP21.88■■□□□ 1.09
HIP1R-203ENST00000535012 CHMP7Q8WUX9 453 aaPredicted RBP21.83■■□□□ 1.09
HIP1R-203ENST00000535012 SYNJ1O43426 1573 aa21.81■■□□□ 1.08
HIP1R-203ENST00000535012 POLA1P09884 1462 aaPredicted RBP21.8■■□□□ 1.08
HIP1R-203ENST00000535012 CLASP1Q7Z460 1538 aa21.79■■□□□ 1.08
HIP1R-203ENST00000535012 SNAPC4Q5SXM2 1469 aa21.77■■□□□ 1.08
HIP1R-203ENST00000535012 TDRD9Q8NDG6 1382 aaKnown RBP21.77■■□□□ 1.08
HIP1R-203ENST00000535012 RAD54L2Q9Y4B4 1467 aa21.74■■□□□ 1.07
HIP1R-203ENST00000535012 SOGA1O94964 1423 aa21.73■■□□□ 1.07
HIP1R-203ENST00000535012 MAGI1Q96QZ7 1491 aaPredicted RBP21.7■■□□□ 1.06
HIP1R-203ENST00000535012 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
HIP1R-203ENST00000535012 WDR97A6NE52 1622 aa21.68■■□□□ 1.06
HIP1R-203ENST00000535012 SYNJ2O15056 1496 aa21.63■■□□□ 1.05
HIP1R-203ENST00000535012 GRIN2BQ13224 1484 aa21.63■■□□□ 1.05
HIP1R-203ENST00000535012 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.05
HIP1R-203ENST00000535012 CUX1P39880 1505 aa21.51■■□□□ 1.03
HIP1R-203ENST00000535012 PBRM1Q86U86 1689 aa21.45■■□□□ 1.02
HIP1R-203ENST00000535012 WRNQ14191 1432 aaPredicted RBP eCLIP21.42■■□□□ 1.02
HIP1R-203ENST00000535012 ERCC6L2Q5T890 1561 aa21.38■■□□□ 1.01
HIP1R-203ENST00000535012 TOP2BQ02880 1626 aa21.37■■□□□ 1.01
HIP1R-203ENST00000535012 ILDR1Q86SU0 546 aaPredicted RBP21.36■■□□□ 1.01
HIP1R-203ENST00000535012 BIVM-ERCC5R4GMW8 1640 aa21.35■■□□□ 1.01
HIP1R-203ENST00000535012 CEP170Q5SW79 1584 aa21.34■■□□□ 1.01
HIP1R-203ENST00000535012 GRIN2AQ12879 1464 aa21.33■■□□□ 1.01
HIP1R-203ENST00000535012 KIF13AQ9H1H9 1805 aa21.32■■□□□ 1
HIP1R-203ENST00000535012 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
HIP1R-203ENST00000535012 ABCA10Q8WWZ4 1543 aa21.28■■□□□ 1
HIP1R-203ENST00000535012 FAM69CQ0P6D2 419 aa21.27■■□□□ 1
HIP1R-203ENST00000535012 NPM1P06748 294 aaKnown RBP eCLIP21.26■□□□□ 0.99
HIP1R-203ENST00000535012 NUP160Q12769 1436 aa21.25■□□□□ 0.99
HIP1R-203ENST00000535012 KDM4FA0A1W2PPD8 638 aa21.21■□□□□ 0.99
HIP1R-203ENST00000535012 SHROOM2Q13796 1616 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms