RNA–Protein interactions for RNA: ENST00000534938.6

FCF1-202, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-202ENST00000534938 NISCHQ9Y2I1 1504 aa25.4■■□□□ 1.66
FCF1-202ENST00000534938 ABCC9O60706 1549 aa23.28■■□□□ 1.32
FCF1-202ENST00000534938 CCDC180Q9P1Z9 1646 aa22.97■■□□□ 1.27
FCF1-202ENST00000534938 AEBP2Q6ZN18 517 aaPredicted RBP22.88■■□□□ 1.25
FCF1-202ENST00000534938 RB1CC1Q8TDY2 1594 aa22.08■■□□□ 1.12
FCF1-202ENST00000534938 DNAJC5BQ9UF47 199 aa21.97■■□□□ 1.11
FCF1-202ENST00000534938 NACADO15069 1562 aa21.82■■□□□ 1.08
FCF1-202ENST00000534938 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
FCF1-202ENST00000534938 PABPN1Q86U42 306 aaKnown RBP eCLIP21.63■■□□□ 1.05
FCF1-202ENST00000534938 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
FCF1-202ENST00000534938 MYO15BQ96JP2 1530 aa21.36■■□□□ 1.01
FCF1-202ENST00000534938 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
FCF1-202ENST00000534938 BICRAQ9NZM4 1560 aa21.26■□□□□ 0.99
FCF1-202ENST00000534938 SHROOM4Q9ULL8 1493 aa21.11■□□□□ 0.97
FCF1-202ENST00000534938 CECR2Q9BXF3 1484 aa21.02■□□□□ 0.96
FCF1-202ENST00000534938 CC2D2AQ9P2K1 1620 aa20.99■□□□□ 0.95
FCF1-202ENST00000534938 ZCCHC6Q5VYS8 1495 aaKnown RBP20.96■□□□□ 0.95
FCF1-202ENST00000534938 DCAF1Q9Y4B6 1507 aa20.96■□□□□ 0.95
FCF1-202ENST00000534938 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
FCF1-202ENST00000534938 EIF4G1Q04637 1599 aaKnown RBP20.87■□□□□ 0.93
FCF1-202ENST00000534938 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
FCF1-202ENST00000534938 ERCC6Q03468 1493 aa20.24■□□□□ 0.83
FCF1-202ENST00000534938 CUX2O14529 1486 aa20.24■□□□□ 0.83
FCF1-202ENST00000534938 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
FCF1-202ENST00000534938 SMARCA2P51531 1590 aa20■□□□□ 0.79
FCF1-202ENST00000534938 ATAD2BQ9ULI0 1458 aa19.98■□□□□ 0.79
FCF1-202ENST00000534938 HMGXB3Q12766 1538 aa19.94■□□□□ 0.78
FCF1-202ENST00000534938 SMARCA4P51532 1647 aa19.89■□□□□ 0.77
FCF1-202ENST00000534938 BAZ1BQ9UIG0 1483 aaKnown RBP19.86■□□□□ 0.77
FCF1-202ENST00000534938 NESP48681 1621 aa19.84■□□□□ 0.77
FCF1-202ENST00000534938 BAZ1AQ9NRL2 1556 aaPredicted RBP19.81■□□□□ 0.76
FCF1-202ENST00000534938 LAMC3Q9Y6N6 1575 aa19.75■□□□□ 0.75
FCF1-202ENST00000534938 THOC2Q8NI27 1593 aaKnown RBP19.7■□□□□ 0.74
FCF1-202ENST00000534938 PDS5BQ9NTI5 1447 aa19.7■□□□□ 0.74
FCF1-202ENST00000534938 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
FCF1-202ENST00000534938 PEG3Q9GZU2 1588 aa19.66■□□□□ 0.74
FCF1-202ENST00000534938 TRIM41Q8WV44 630 aa19.62■□□□□ 0.73
FCF1-202ENST00000534938 KIF21AQ7Z4S6 1674 aa19.6■□□□□ 0.73
FCF1-202ENST00000534938 MROH2BQ7Z745 1585 aa19.53■□□□□ 0.72
FCF1-202ENST00000534938 CADPSQ9ULU8 1353 aa19.51■□□□□ 0.71
FCF1-202ENST00000534938 MRC2Q9UBG0 1479 aa19.49■□□□□ 0.71
FCF1-202ENST00000534938 POTEDQ86YR6 584 aa19.45■□□□□ 0.7
FCF1-202ENST00000534938 WDR62O43379 1518 aa19.41■□□□□ 0.7
FCF1-202ENST00000534938 CEP164Q9UPV0 1460 aa19.39■□□□□ 0.69
FCF1-202ENST00000534938 OSCARQ8IYS5 282 aa19.32■□□□□ 0.68
FCF1-202ENST00000534938 WIZO95785 1651 aa19.3■□□□□ 0.68
FCF1-202ENST00000534938 FANCD2Q9BXW9 1451 aa19.3■□□□□ 0.68
FCF1-202ENST00000534938 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
FCF1-202ENST00000534938 CFTRP13569 1480 aa19.18■□□□□ 0.66
FCF1-202ENST00000534938 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.64
FCF1-202ENST00000534938 URB2Q14146 1524 aaKnown RBP19.08■□□□□ 0.64
FCF1-202ENST00000534938 RSF1Q96T23 1441 aaPredicted RBP19.03■□□□□ 0.64
FCF1-202ENST00000534938 IFT140Q96RY7 1462 aa18.99■□□□□ 0.63
FCF1-202ENST00000534938 PRDM2Q13029 1718 aa18.99■□□□□ 0.63
FCF1-202ENST00000534938 RIMBP3CA6NJZ7 1639 aa18.99■□□□□ 0.63
FCF1-202ENST00000534938 RIMBP3BA6NNM3 1639 aa18.99■□□□□ 0.63
FCF1-202ENST00000534938 RIMBP3Q9UFD9 1639 aa18.99■□□□□ 0.63
FCF1-202ENST00000534938 ARHGEF11O15085 1522 aa18.91■□□□□ 0.62
FCF1-202ENST00000534938 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
FCF1-202ENST00000534938 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
FCF1-202ENST00000534938 CYB5RLQ6IPT4 315 aa18.87■□□□□ 0.61
FCF1-202ENST00000534938 TOPBP1Q92547 1522 aa18.86■□□□□ 0.61
FCF1-202ENST00000534938 TRHP20396 242 aaPredicted RBP18.86■□□□□ 0.61
FCF1-202ENST00000534938 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
FCF1-202ENST00000534938 FBLN2P98095 1184 aa18.83■□□□□ 0.6
FCF1-202ENST00000534938 EIF4G3O43432 1585 aaKnown RBP18.83■□□□□ 0.6
FCF1-202ENST00000534938 DNMBPQ6XZF7 1577 aa18.79■□□□□ 0.6
FCF1-202ENST00000534938 CHD1O14646 1710 aa18.74■□□□□ 0.59
FCF1-202ENST00000534938 AQRO60306 1485 aaKnown RBP eCLIP18.73■□□□□ 0.59
FCF1-202ENST00000534938 TARBP1Q13395 1621 aaKnown RBP18.67■□□□□ 0.58
FCF1-202ENST00000534938 ARAP1Q96P48 1450 aa18.66■□□□□ 0.58
FCF1-202ENST00000534938 POLA1P09884 1462 aaPredicted RBP18.64■□□□□ 0.57
FCF1-202ENST00000534938 CHMP7Q8WUX9 453 aaPredicted RBP18.62■□□□□ 0.57
FCF1-202ENST00000534938 SOGA1O94964 1423 aa18.62■□□□□ 0.57
FCF1-202ENST00000534938 TDRD9Q8NDG6 1382 aaKnown RBP18.58■□□□□ 0.57
FCF1-202ENST00000534938 SYNJ1O43426 1573 aa18.57■□□□□ 0.56
FCF1-202ENST00000534938 RAD54L2Q9Y4B4 1467 aa18.57■□□□□ 0.56
FCF1-202ENST00000534938 WDR97A6NE52 1622 aa18.56■□□□□ 0.56
FCF1-202ENST00000534938 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
FCF1-202ENST00000534938 MAGI1Q96QZ7 1491 aaPredicted RBP18.52■□□□□ 0.56
FCF1-202ENST00000534938 FGD5Q6ZNL6 1462 aa18.51■□□□□ 0.55
FCF1-202ENST00000534938 FOXD1Q16676 465 aa18.5■□□□□ 0.55
FCF1-202ENST00000534938 GRIN2BQ13224 1484 aa18.49■□□□□ 0.55
FCF1-202ENST00000534938 CLASP1Q7Z460 1538 aa18.48■□□□□ 0.55
FCF1-202ENST00000534938 SYNJ2O15056 1496 aa18.46■□□□□ 0.55
FCF1-202ENST00000534938 CUX1P39880 1505 aa18.39■□□□□ 0.53
FCF1-202ENST00000534938 GAPVD1Q14C86 1478 aa18.38■□□□□ 0.53
FCF1-202ENST00000534938 PBRM1Q86U86 1689 aa18.36■□□□□ 0.53
FCF1-202ENST00000534938 ABCA10Q8WWZ4 1543 aa18.27■□□□□ 0.51
FCF1-202ENST00000534938 ABCA5Q8WWZ7 1642 aa18.23■□□□□ 0.51
FCF1-202ENST00000534938 GRIN2AQ12879 1464 aa18.23■□□□□ 0.51
FCF1-202ENST00000534938 WRNQ14191 1432 aaPredicted RBP eCLIP18.22■□□□□ 0.51
FCF1-202ENST00000534938 CEP170Q5SW79 1584 aa18.16■□□□□ 0.5
FCF1-202ENST00000534938 ADAMTS12P58397 1594 aa18.15■□□□□ 0.5
FCF1-202ENST00000534938 FHAD1B1AJZ9 1412 aa18.14■□□□□ 0.49
FCF1-202ENST00000534938 NUP160Q12769 1436 aa18.13■□□□□ 0.49
FCF1-202ENST00000534938 NPM1P06748 294 aaKnown RBP eCLIP18.12■□□□□ 0.49
FCF1-202ENST00000534938 ERCC6L2Q5T890 1561 aa18.12■□□□□ 0.49
FCF1-202ENST00000534938 SUPT5HO00267 1087 aaKnown RBP18.1■□□□□ 0.49
FCF1-202ENST00000534938 SHROOM2Q13796 1616 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms