RNA–Protein interactions for RNA: ENST00000534764.1

GRAMD1B-210, Transcript of GRAM domain containing 1B, humanhuman

TSL 1 (best)

Gene GRAMD1B, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-210ENST00000534764 NISCHQ9Y2I1 1504 aa35.18■■■■□ 3.22
GRAMD1B-210ENST00000534764 CCDC180Q9P1Z9 1646 aa30.6■■■□□ 2.49
GRAMD1B-210ENST00000534764 ZCCHC6Q5VYS8 1495 aaKnown RBP29.62■■■□□ 2.33
GRAMD1B-210ENST00000534764 DCAF1Q9Y4B6 1507 aa29.1■■■□□ 2.25
GRAMD1B-210ENST00000534764 DCAF8L2P0C7V8 631 aa28.96■■■□□ 2.23
GRAMD1B-210ENST00000534764 SHROOM4Q9ULL8 1493 aa28.86■■■□□ 2.21
GRAMD1B-210ENST00000534764 ABCC9O60706 1549 aa28.68■■■□□ 2.18
GRAMD1B-210ENST00000534764 MYO15BQ96JP2 1530 aa28.66■■■□□ 2.18
GRAMD1B-210ENST00000534764 NACADO15069 1562 aa28.42■■■□□ 2.14
GRAMD1B-210ENST00000534764 SCRIBQ14160 1630 aa28.17■■■□□ 2.1
GRAMD1B-210ENST00000534764 RB1CC1Q8TDY2 1594 aa28.13■■■□□ 2.09
GRAMD1B-210ENST00000534764 SUPT5HO00267 1087 aaKnown RBP27.88■■■□□ 2.05
GRAMD1B-210ENST00000534764 UNC13AQ9UPW8 1703 aa27.57■■■□□ 2
GRAMD1B-210ENST00000534764 RSF1Q96T23 1441 aaPredicted RBP27.37■■□□□ 1.97
GRAMD1B-210ENST00000534764 CECR2Q9BXF3 1484 aa27.3■■□□□ 1.96
GRAMD1B-210ENST00000534764 BICRAQ9NZM4 1560 aa27.25■■□□□ 1.95
GRAMD1B-210ENST00000534764 MROH2BQ7Z745 1585 aa27.19■■□□□ 1.94
GRAMD1B-210ENST00000534764 BAZ1AQ9NRL2 1556 aaPredicted RBP27.16■■□□□ 1.94
GRAMD1B-210ENST00000534764 PABPN1Q86U42 306 aaKnown RBP eCLIP27.08■■□□□ 1.92
GRAMD1B-210ENST00000534764 SMARCA4P51532 1647 aa27.01■■□□□ 1.91
GRAMD1B-210ENST00000534764 WIZO95785 1651 aa26.99■■□□□ 1.91
GRAMD1B-210ENST00000534764 CHIC1Q5VXU3 224 aa26.82■■□□□ 1.88
GRAMD1B-210ENST00000534764 TOP2AP11388 1531 aaKnown RBP26.73■■□□□ 1.87
GRAMD1B-210ENST00000534764 PEG3Q9GZU2 1588 aa26.66■■□□□ 1.86
GRAMD1B-210ENST00000534764 SMARCA2P51531 1590 aa26.5■■□□□ 1.83
GRAMD1B-210ENST00000534764 ATAD2BQ9ULI0 1458 aa26.48■■□□□ 1.83
GRAMD1B-210ENST00000534764 CCDC88BA6NC98 1476 aa26.43■■□□□ 1.82
GRAMD1B-210ENST00000534764 EIF4G1Q04637 1599 aaKnown RBP26.42■■□□□ 1.82
GRAMD1B-210ENST00000534764 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
GRAMD1B-210ENST00000534764 HMGXB3Q12766 1538 aa26.22■■□□□ 1.79
GRAMD1B-210ENST00000534764 TRIM41Q8WV44 630 aa26.21■■□□□ 1.79
GRAMD1B-210ENST00000534764 NCAPD3P42695 1498 aa26.21■■□□□ 1.79
GRAMD1B-210ENST00000534764 ABCC8Q09428 1581 aa25.97■■□□□ 1.75
GRAMD1B-210ENST00000534764 CC2D2AQ9P2K1 1620 aa25.97■■□□□ 1.75
GRAMD1B-210ENST00000534764 LOC105371045A0A1W2PR82 267 aa25.78■■□□□ 1.72
GRAMD1B-210ENST00000534764 WRNQ14191 1432 aaPredicted RBP eCLIP25.78■■□□□ 1.72
GRAMD1B-210ENST00000534764 FAM9AQ8IZU1 332 aaPredicted RBP25.74■■□□□ 1.71
GRAMD1B-210ENST00000534764 CFTRP13569 1480 aa25.7■■□□□ 1.7
GRAMD1B-210ENST00000534764 SYNJ1O43426 1573 aa25.66■■□□□ 1.7
GRAMD1B-210ENST00000534764 PRDM2Q13029 1718 aa25.63■■□□□ 1.69
GRAMD1B-210ENST00000534764 EEA1Q15075 1411 aa25.55■■□□□ 1.68
GRAMD1B-210ENST00000534764 CADPSQ9ULU8 1353 aa25.55■■□□□ 1.68
GRAMD1B-210ENST00000534764 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
GRAMD1B-210ENST00000534764 BIVM-ERCC5R4GMW8 1640 aa25.53■■□□□ 1.68
GRAMD1B-210ENST00000534764 SOGA1O94964 1423 aa25.51■■□□□ 1.67
GRAMD1B-210ENST00000534764 CUX1P39880 1505 aa25.41■■□□□ 1.66
GRAMD1B-210ENST00000534764 RUSC2Q8N2Y8 1516 aa25.4■■□□□ 1.66
GRAMD1B-210ENST00000534764 CSRNP3Q8WYN3 585 aa25.36■■□□□ 1.65
GRAMD1B-210ENST00000534764 EHMT2Q96KQ7 1210 aa25.36■■□□□ 1.65
GRAMD1B-210ENST00000534764 LAMC3Q9Y6N6 1575 aa25.31■■□□□ 1.64
GRAMD1B-210ENST00000534764 FANCD2Q9BXW9 1451 aa25.29■■□□□ 1.64
GRAMD1B-210ENST00000534764 NESP48681 1621 aa25.25■■□□□ 1.63
GRAMD1B-210ENST00000534764 GOLGA3Q08378 1498 aa25.22■■□□□ 1.63
GRAMD1B-210ENST00000534764 KIF21BO75037 1637 aa25.22■■□□□ 1.63
GRAMD1B-210ENST00000534764 CEP164Q9UPV0 1460 aa25.19■■□□□ 1.62
GRAMD1B-210ENST00000534764 TNIKQ9UKE5 1360 aa25.16■■□□□ 1.62
GRAMD1B-210ENST00000534764 DNAJC5BQ9UF47 199 aa25.16■■□□□ 1.62
GRAMD1B-210ENST00000534764 DNMBPQ6XZF7 1577 aa25.13■■□□□ 1.61
GRAMD1B-210ENST00000534764 KIF27Q86VH2 1401 aa25.11■■□□□ 1.61
GRAMD1B-210ENST00000534764 FGD5Q6ZNL6 1462 aa25.1■■□□□ 1.61
GRAMD1B-210ENST00000534764 PDS5BQ9NTI5 1447 aa25.09■■□□□ 1.61
GRAMD1B-210ENST00000534764 UBTFP17480 764 aaKnown RBP25.06■■□□□ 1.6
GRAMD1B-210ENST00000534764 CEP162Q5TB80 1403 aa25.05■■□□□ 1.6
GRAMD1B-210ENST00000534764 TOPBP1Q92547 1522 aa25.05■■□□□ 1.6
GRAMD1B-210ENST00000534764 RAPGEF2Q9Y4G8 1499 aa25■■□□□ 1.59
GRAMD1B-210ENST00000534764 ERICH3Q5RHP9 1530 aa25■■□□□ 1.59
GRAMD1B-210ENST00000534764 PRXQ9BXM0 1461 aa24.99■■□□□ 1.59
GRAMD1B-210ENST00000534764 KIF21AQ7Z4S6 1674 aa24.98■■□□□ 1.59
GRAMD1B-210ENST00000534764 CUX2O14529 1486 aa24.98■■□□□ 1.59
GRAMD1B-210ENST00000534764 URB2Q14146 1524 aaKnown RBP24.95■■□□□ 1.59
GRAMD1B-210ENST00000534764 POLA1P09884 1462 aaPredicted RBP24.94■■□□□ 1.58
GRAMD1B-210ENST00000534764 ABCA10Q8WWZ4 1543 aa24.88■■□□□ 1.57
GRAMD1B-210ENST00000534764 PCGF6Q9BYE7 350 aa24.88■■□□□ 1.57
GRAMD1B-210ENST00000534764 RAD54L2Q9Y4B4 1467 aa24.85■■□□□ 1.57
GRAMD1B-210ENST00000534764 TRIM26Q12899 539 aaPredicted RBP24.85■■□□□ 1.57
GRAMD1B-210ENST00000534764 IGF1RP08069 1367 aa24.82■■□□□ 1.56
GRAMD1B-210ENST00000534764 CLIP1P30622 1438 aa24.8■■□□□ 1.56
GRAMD1B-210ENST00000534764 WDR97A6NE52 1622 aa24.8■■□□□ 1.56
GRAMD1B-210ENST00000534764 MRC2Q9UBG0 1479 aa24.77■■□□□ 1.56
GRAMD1B-210ENST00000534764 CARMIL1Q5VZK9 1371 aa24.73■■□□□ 1.55
GRAMD1B-210ENST00000534764 CUL7Q14999 1698 aa24.68■■□□□ 1.54
GRAMD1B-210ENST00000534764 ABCA5Q8WWZ7 1642 aa24.67■■□□□ 1.54
GRAMD1B-210ENST00000534764 TARBP1Q13395 1621 aaKnown RBP24.65■■□□□ 1.54
GRAMD1B-210ENST00000534764 WDR62O43379 1518 aa24.63■■□□□ 1.53
GRAMD1B-210ENST00000534764 VPS8Q8N3P4 1428 aa24.63■■□□□ 1.53
GRAMD1B-210ENST00000534764 GAPVD1Q14C86 1478 aa24.6■■□□□ 1.53
GRAMD1B-210ENST00000534764 ERCC6Q03468 1493 aa24.59■■□□□ 1.53
GRAMD1B-210ENST00000534764 TDRD9Q8NDG6 1382 aaKnown RBP24.58■■□□□ 1.52
GRAMD1B-210ENST00000534764 RANGAP1P46060 587 aaPredicted RBP24.57■■□□□ 1.52
GRAMD1B-210ENST00000534764 PPARGC1BQ86YN6 1023 aaKnown RBP24.56■■□□□ 1.52
GRAMD1B-210ENST00000534764 ARAP1Q96P48 1450 aa24.53■■□□□ 1.52
GRAMD1B-210ENST00000534764 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
GRAMD1B-210ENST00000534764 THOC2Q8NI27 1593 aaKnown RBP24.5■■□□□ 1.51
GRAMD1B-210ENST00000534764 ARHGAP35Q9NRY4 1499 aa24.48■■□□□ 1.51
GRAMD1B-210ENST00000534764 PBRM1Q86U86 1689 aa24.47■■□□□ 1.51
GRAMD1B-210ENST00000534764 CTTNBP2Q8WZ74 1663 aa24.45■■□□□ 1.5
GRAMD1B-210ENST00000534764 APLP2Q06481 763 aa24.4■■□□□ 1.5
GRAMD1B-210ENST00000534764 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.49
GRAMD1B-210ENST00000534764 HRCP23327 699 aa24.38■■□□□ 1.49
GRAMD1B-210ENST00000534764 GRIN2BQ13224 1484 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms