RNA–Protein interactions for RNA: ENST00000534158.5

PUS3-204, Transcript of pseudouridylate synthase 3, humanhuman

TSL 2

Gene PUS3, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUS3-204ENST00000534158 NISCHQ9Y2I1 1504 aa27.01■■□□□ 1.91
PUS3-204ENST00000534158 ABCC9O60706 1549 aa25.06■■□□□ 1.6
PUS3-204ENST00000534158 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
PUS3-204ENST00000534158 DNAJC5BQ9UF47 199 aa23.99■■□□□ 1.43
PUS3-204ENST00000534158 RB1CC1Q8TDY2 1594 aa23.71■■□□□ 1.39
PUS3-204ENST00000534158 NACADO15069 1562 aa23.4■■□□□ 1.34
PUS3-204ENST00000534158 PABPN1Q86U42 306 aaKnown RBP eCLIP23.2■■□□□ 1.3
PUS3-204ENST00000534158 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
PUS3-204ENST00000534158 UNC13AQ9UPW8 1703 aa23.16■■□□□ 1.3
PUS3-204ENST00000534158 DCAF8L2P0C7V8 631 aa23.08■■□□□ 1.29
PUS3-204ENST00000534158 CHIC1Q5VXU3 224 aa23.04■■□□□ 1.28
PUS3-204ENST00000534158 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
PUS3-204ENST00000534158 MYO15BQ96JP2 1530 aa22.88■■□□□ 1.25
PUS3-204ENST00000534158 SHROOM4Q9ULL8 1493 aa22.7■■□□□ 1.22
PUS3-204ENST00000534158 CECR2Q9BXF3 1484 aa22.68■■□□□ 1.22
PUS3-204ENST00000534158 CC2D2AQ9P2K1 1620 aa22.67■■□□□ 1.22
PUS3-204ENST00000534158 DNAJC5Q9H3Z4 198 aa22.63■■□□□ 1.21
PUS3-204ENST00000534158 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
PUS3-204ENST00000534158 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
PUS3-204ENST00000534158 SCRIBQ14160 1630 aa22.25■■□□□ 1.15
PUS3-204ENST00000534158 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
PUS3-204ENST00000534158 CUX2O14529 1486 aa21.96■■□□□ 1.11
PUS3-204ENST00000534158 ERCC6Q03468 1493 aa21.77■■□□□ 1.07
PUS3-204ENST00000534158 NCAPD3P42695 1498 aa21.57■■□□□ 1.04
PUS3-204ENST00000534158 ATAD2BQ9ULI0 1458 aa21.37■■□□□ 1.01
PUS3-204ENST00000534158 HMGXB3Q12766 1538 aa21.36■■□□□ 1.01
PUS3-204ENST00000534158 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
PUS3-204ENST00000534158 TRIM41Q8WV44 630 aa21.33■■□□□ 1.01
PUS3-204ENST00000534158 NESP48681 1621 aa21.32■■□□□ 1
PUS3-204ENST00000534158 THOC2Q8NI27 1593 aaKnown RBP21.29■■□□□ 1
PUS3-204ENST00000534158 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
PUS3-204ENST00000534158 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
PUS3-204ENST00000534158 BAZ1BQ9UIG0 1483 aaKnown RBP21.16■□□□□ 0.98
PUS3-204ENST00000534158 KIF21AQ7Z4S6 1674 aa21.13■□□□□ 0.97
PUS3-204ENST00000534158 PDS5BQ9NTI5 1447 aa21.12■□□□□ 0.97
PUS3-204ENST00000534158 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
PUS3-204ENST00000534158 PEG3Q9GZU2 1588 aa21.05■□□□□ 0.96
PUS3-204ENST00000534158 MRC2Q9UBG0 1479 aa20.91■□□□□ 0.94
PUS3-204ENST00000534158 WDR62O43379 1518 aa20.88■□□□□ 0.93
PUS3-204ENST00000534158 OSCARQ8IYS5 282 aa20.88■□□□□ 0.93
PUS3-204ENST00000534158 CADPSQ9ULU8 1353 aa20.87■□□□□ 0.93
PUS3-204ENST00000534158 MROH2BQ7Z745 1585 aa20.74■□□□□ 0.91
PUS3-204ENST00000534158 CEP164Q9UPV0 1460 aa20.72■□□□□ 0.91
PUS3-204ENST00000534158 FANCD2Q9BXW9 1451 aa20.62■□□□□ 0.89
PUS3-204ENST00000534158 RIMBP3CA6NJZ7 1639 aa20.6■□□□□ 0.89
PUS3-204ENST00000534158 RIMBP3BA6NNM3 1639 aa20.6■□□□□ 0.89
PUS3-204ENST00000534158 RIMBP3Q9UFD9 1639 aa20.6■□□□□ 0.89
PUS3-204ENST00000534158 WIZO95785 1651 aa20.51■□□□□ 0.87
PUS3-204ENST00000534158 CFTRP13569 1480 aa20.5■□□□□ 0.87
PUS3-204ENST00000534158 ARHGEF11O15085 1522 aa20.46■□□□□ 0.87
PUS3-204ENST00000534158 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
PUS3-204ENST00000534158 TRHP20396 242 aaPredicted RBP20.38■□□□□ 0.85
PUS3-204ENST00000534158 PRDM2Q13029 1718 aa20.37■□□□□ 0.85
PUS3-204ENST00000534158 CYB5RLQ6IPT4 315 aa20.37■□□□□ 0.85
PUS3-204ENST00000534158 PHF23Q9BUL5 403 aaPredicted RBP20.34■□□□□ 0.85
PUS3-204ENST00000534158 IFT140Q96RY7 1462 aa20.34■□□□□ 0.85
PUS3-204ENST00000534158 ZNF608Q9ULD9 1512 aaPredicted RBP20.27■□□□□ 0.83
PUS3-204ENST00000534158 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
PUS3-204ENST00000534158 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
PUS3-204ENST00000534158 CHD1O14646 1710 aa20.2■□□□□ 0.82
PUS3-204ENST00000534158 EIF4G3O43432 1585 aaKnown RBP20.19■□□□□ 0.82
PUS3-204ENST00000534158 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
PUS3-204ENST00000534158 ARAP1Q96P48 1450 aa20.17■□□□□ 0.82
PUS3-204ENST00000534158 TOPBP1Q92547 1522 aa20.15■□□□□ 0.82
PUS3-204ENST00000534158 FBLN2P98095 1184 aa20.08■□□□□ 0.81
PUS3-204ENST00000534158 DNMBPQ6XZF7 1577 aa20.05■□□□□ 0.8
PUS3-204ENST00000534158 TARBP1Q13395 1621 aaKnown RBP20.03■□□□□ 0.8
PUS3-204ENST00000534158 AQRO60306 1485 aaKnown RBP eCLIP20.03■□□□□ 0.8
PUS3-204ENST00000534158 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
PUS3-204ENST00000534158 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
PUS3-204ENST00000534158 CLASP1Q7Z460 1538 aa19.9■□□□□ 0.78
PUS3-204ENST00000534158 WDR97A6NE52 1622 aa19.9■□□□□ 0.78
PUS3-204ENST00000534158 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
PUS3-204ENST00000534158 CHMP7Q8WUX9 453 aaPredicted RBP19.88■□□□□ 0.77
PUS3-204ENST00000534158 SOGA1O94964 1423 aa19.84■□□□□ 0.77
PUS3-204ENST00000534158 MAGI1Q96QZ7 1491 aaPredicted RBP19.82■□□□□ 0.76
PUS3-204ENST00000534158 TDRD9Q8NDG6 1382 aaKnown RBP19.82■□□□□ 0.76
PUS3-204ENST00000534158 SNAPC4Q5SXM2 1469 aa19.81■□□□□ 0.76
PUS3-204ENST00000534158 RAD54L2Q9Y4B4 1467 aa19.79■□□□□ 0.76
PUS3-204ENST00000534158 SYNJ2O15056 1496 aa19.75■□□□□ 0.75
PUS3-204ENST00000534158 GAPVD1Q14C86 1478 aa19.75■□□□□ 0.75
PUS3-204ENST00000534158 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
PUS3-204ENST00000534158 FGD5Q6ZNL6 1462 aa19.67■□□□□ 0.74
PUS3-204ENST00000534158 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
PUS3-204ENST00000534158 SENP3Q9H4L4 574 aaPredicted RBP19.56■□□□□ 0.72
PUS3-204ENST00000534158 KIF13AQ9H1H9 1805 aa19.55■□□□□ 0.72
PUS3-204ENST00000534158 CUX1P39880 1505 aa19.54■□□□□ 0.72
PUS3-204ENST00000534158 CEP170Q5SW79 1584 aa19.47■□□□□ 0.71
PUS3-204ENST00000534158 ERCC6L2Q5T890 1561 aa19.47■□□□□ 0.71
PUS3-204ENST00000534158 ABCA5Q8WWZ7 1642 aa19.47■□□□□ 0.71
PUS3-204ENST00000534158 GRIN2AQ12879 1464 aa19.46■□□□□ 0.71
PUS3-204ENST00000534158 ABCA10Q8WWZ4 1543 aa19.45■□□□□ 0.7
PUS3-204ENST00000534158 SHROOM2Q13796 1616 aa19.43■□□□□ 0.7
PUS3-204ENST00000534158 NUP160Q12769 1436 aa19.41■□□□□ 0.7
PUS3-204ENST00000534158 ILDR1Q86SU0 546 aaPredicted RBP19.38■□□□□ 0.69
PUS3-204ENST00000534158 NPM1P06748 294 aaKnown RBP eCLIP19.37■□□□□ 0.69
PUS3-204ENST00000534158 FAM69CQ0P6D2 419 aa19.35■□□□□ 0.69
PUS3-204ENST00000534158 ADAMTS12P58397 1594 aa19.35■□□□□ 0.69
PUS3-204ENST00000534158 ABCC10Q5T3U5 1492 aa19.33■□□□□ 0.68
PUS3-204ENST00000534158 FHAD1B1AJZ9 1412 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms