RNA–Protein interactions for RNA: ENST00000533039.2

SOX9-AS1-210, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 426 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-210ENST00000533039 NISCHQ9Y2I1 1504 aa21.67■■□□□ 1.06
SOX9-AS1-210ENST00000533039 CCDC180Q9P1Z9 1646 aa19.48■□□□□ 0.71
SOX9-AS1-210ENST00000533039 ABCC9O60706 1549 aa19.24■□□□□ 0.67
SOX9-AS1-210ENST00000533039 AEBP2Q6ZN18 517 aaPredicted RBP18.84■□□□□ 0.61
SOX9-AS1-210ENST00000533039 RB1CC1Q8TDY2 1594 aa18.45■□□□□ 0.54
SOX9-AS1-210ENST00000533039 NACADO15069 1562 aa18.34■□□□□ 0.53
SOX9-AS1-210ENST00000533039 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
SOX9-AS1-210ENST00000533039 MYO15BQ96JP2 1530 aa18.1■□□□□ 0.49
SOX9-AS1-210ENST00000533039 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
SOX9-AS1-210ENST00000533039 ZCCHC6Q5VYS8 1495 aaKnown RBP17.99■□□□□ 0.47
SOX9-AS1-210ENST00000533039 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
SOX9-AS1-210ENST00000533039 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.45
SOX9-AS1-210ENST00000533039 BICRAQ9NZM4 1560 aa17.84■□□□□ 0.45
SOX9-AS1-210ENST00000533039 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.44
SOX9-AS1-210ENST00000533039 SCRIBQ14160 1630 aa17.71■□□□□ 0.43
SOX9-AS1-210ENST00000533039 SHROOM4Q9ULL8 1493 aa17.66■□□□□ 0.42
SOX9-AS1-210ENST00000533039 CHIC1Q5VXU3 224 aa17.6■□□□□ 0.41
SOX9-AS1-210ENST00000533039 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
SOX9-AS1-210ENST00000533039 EIF4G1Q04637 1599 aaKnown RBP17.41■□□□□ 0.38
SOX9-AS1-210ENST00000533039 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
SOX9-AS1-210ENST00000533039 SMARCA4P51532 1647 aa16.91■□□□□ 0.3
SOX9-AS1-210ENST00000533039 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
SOX9-AS1-210ENST00000533039 SMARCA2P51531 1590 aa16.86■□□□□ 0.29
SOX9-AS1-210ENST00000533039 BAZ1AQ9NRL2 1556 aaPredicted RBP16.85■□□□□ 0.29
SOX9-AS1-210ENST00000533039 ATAD2BQ9ULI0 1458 aa16.84■□□□□ 0.29
SOX9-AS1-210ENST00000533039 HMGXB3Q12766 1538 aa16.8■□□□□ 0.28
SOX9-AS1-210ENST00000533039 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
SOX9-AS1-210ENST00000533039 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
SOX9-AS1-210ENST00000533039 MROH2BQ7Z745 1585 aa16.69■□□□□ 0.26
SOX9-AS1-210ENST00000533039 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
SOX9-AS1-210ENST00000533039 NESP48681 1621 aa16.56■□□□□ 0.24
SOX9-AS1-210ENST00000533039 WIZO95785 1651 aa16.55■□□□□ 0.24
SOX9-AS1-210ENST00000533039 CUX2O14529 1486 aa16.54■□□□□ 0.24
SOX9-AS1-210ENST00000533039 LAMC3Q9Y6N6 1575 aa16.54■□□□□ 0.24
SOX9-AS1-210ENST00000533039 KIF21AQ7Z4S6 1674 aa16.44■□□□□ 0.22
SOX9-AS1-210ENST00000533039 THOC2Q8NI27 1593 aaKnown RBP16.41■□□□□ 0.22
SOX9-AS1-210ENST00000533039 PDS5BQ9NTI5 1447 aa16.4■□□□□ 0.22
SOX9-AS1-210ENST00000533039 RSF1Q96T23 1441 aaPredicted RBP16.37■□□□□ 0.21
SOX9-AS1-210ENST00000533039 CADPSQ9ULU8 1353 aa16.36■□□□□ 0.21
SOX9-AS1-210ENST00000533039 TOP2AP11388 1531 aaKnown RBP16.33■□□□□ 0.2
SOX9-AS1-210ENST00000533039 DNAJC5Q9H3Z4 198 aa16.32■□□□□ 0.2
SOX9-AS1-210ENST00000533039 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
SOX9-AS1-210ENST00000533039 MRC2Q9UBG0 1479 aa16.24■□□□□ 0.19
SOX9-AS1-210ENST00000533039 CEP164Q9UPV0 1460 aa16.23■□□□□ 0.19
SOX9-AS1-210ENST00000533039 PRDM2Q13029 1718 aa16.22■□□□□ 0.19
SOX9-AS1-210ENST00000533039 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
SOX9-AS1-210ENST00000533039 CFTRP13569 1480 aa16.21■□□□□ 0.19
SOX9-AS1-210ENST00000533039 WDR62O43379 1518 aa16.2■□□□□ 0.18
SOX9-AS1-210ENST00000533039 FANCD2Q9BXW9 1451 aa16.2■□□□□ 0.18
SOX9-AS1-210ENST00000533039 CCDC88BA6NC98 1476 aa16.11■□□□□ 0.17
SOX9-AS1-210ENST00000533039 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
SOX9-AS1-210ENST00000533039 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
SOX9-AS1-210ENST00000533039 TOPBP1Q92547 1522 aa15.91■□□□□ 0.14
SOX9-AS1-210ENST00000533039 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
SOX9-AS1-210ENST00000533039 DNMBPQ6XZF7 1577 aa15.89■□□□□ 0.13
SOX9-AS1-210ENST00000533039 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
SOX9-AS1-210ENST00000533039 ZNF608Q9ULD9 1512 aaPredicted RBP15.81■□□□□ 0.12
SOX9-AS1-210ENST00000533039 OSCARQ8IYS5 282 aa15.8■□□□□ 0.12
SOX9-AS1-210ENST00000533039 EIF4G3O43432 1585 aaKnown RBP15.79■□□□□ 0.12
SOX9-AS1-210ENST00000533039 SUPT5HO00267 1087 aaKnown RBP15.78■□□□□ 0.12
SOX9-AS1-210ENST00000533039 TARBP1Q13395 1621 aaKnown RBP15.78■□□□□ 0.12
SOX9-AS1-210ENST00000533039 POLA1P09884 1462 aaPredicted RBP15.74■□□□□ 0.11
SOX9-AS1-210ENST00000533039 CHD1O14646 1710 aa15.7■□□□□ 0.1
SOX9-AS1-210ENST00000533039 TRIM41Q8WV44 630 aa15.69■□□□□ 0.1
SOX9-AS1-210ENST00000533039 CUX1P39880 1505 aa15.68■□□□□ 0.1
SOX9-AS1-210ENST00000533039 AQRO60306 1485 aaKnown RBP eCLIP15.68■□□□□ 0.1
SOX9-AS1-210ENST00000533039 FGD5Q6ZNL6 1462 aa15.68■□□□□ 0.1
SOX9-AS1-210ENST00000533039 SOGA1O94964 1423 aa15.68■□□□□ 0.1
SOX9-AS1-210ENST00000533039 WDR97A6NE52 1622 aa15.67■□□□□ 0.1
SOX9-AS1-210ENST00000533039 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
SOX9-AS1-210ENST00000533039 RIMBP3CA6NJZ7 1639 aa15.62■□□□□ 0.09
SOX9-AS1-210ENST00000533039 RIMBP3BA6NNM3 1639 aa15.62■□□□□ 0.09
SOX9-AS1-210ENST00000533039 RIMBP3Q9UFD9 1639 aa15.62■□□□□ 0.09
SOX9-AS1-210ENST00000533039 TDRD9Q8NDG6 1382 aaKnown RBP15.61■□□□□ 0.09
SOX9-AS1-210ENST00000533039 FBLN2P98095 1184 aa15.59■□□□□ 0.09
SOX9-AS1-210ENST00000533039 PBRM1Q86U86 1689 aa15.58■□□□□ 0.08
SOX9-AS1-210ENST00000533039 ARHGEF11O15085 1522 aa15.56■□□□□ 0.08
SOX9-AS1-210ENST00000533039 SNAPC4Q5SXM2 1469 aa15.55■□□□□ 0.08
SOX9-AS1-210ENST00000533039 GRIN2BQ13224 1484 aa15.54■□□□□ 0.08
SOX9-AS1-210ENST00000533039 MAGI1Q96QZ7 1491 aaPredicted RBP15.54■□□□□ 0.08
SOX9-AS1-210ENST00000533039 BIVM-ERCC5R4GMW8 1640 aa15.54■□□□□ 0.08
SOX9-AS1-210ENST00000533039 ABCA10Q8WWZ4 1543 aa15.51■□□□□ 0.07
SOX9-AS1-210ENST00000533039 GAPVD1Q14C86 1478 aa15.51■□□□□ 0.07
SOX9-AS1-210ENST00000533039 TOP2BQ02880 1626 aa15.5■□□□□ 0.07
SOX9-AS1-210ENST00000533039 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
SOX9-AS1-210ENST00000533039 SYNJ1O43426 1573 aa15.49■□□□□ 0.07
SOX9-AS1-210ENST00000533039 CHMP7Q8WUX9 453 aaPredicted RBP15.49■□□□□ 0.07
SOX9-AS1-210ENST00000533039 WRNQ14191 1432 aaPredicted RBP eCLIP15.48■□□□□ 0.07
SOX9-AS1-210ENST00000533039 SYNJ2O15056 1496 aa15.47■□□□□ 0.07
SOX9-AS1-210ENST00000533039 CLASP1Q7Z460 1538 aa15.44■□□□□ 0.06
SOX9-AS1-210ENST00000533039 CYB5RLQ6IPT4 315 aa15.41■□□□□ 0.06
SOX9-AS1-210ENST00000533039 ARAP1Q96P48 1450 aa15.39■□□□□ 0.05
SOX9-AS1-210ENST00000533039 ADAMTS12P58397 1594 aa15.36■□□□□ 0.05
SOX9-AS1-210ENST00000533039 GRIN2AQ12879 1464 aa15.34■□□□□ 0.05
SOX9-AS1-210ENST00000533039 ERICH3Q5RHP9 1530 aa15.34■□□□□ 0.05
SOX9-AS1-210ENST00000533039 FHAD1B1AJZ9 1412 aa15.31■□□□□ 0.04
SOX9-AS1-210ENST00000533039 FOXD1Q16676 465 aa15.28■□□□□ 0.04
SOX9-AS1-210ENST00000533039 CEP170Q5SW79 1584 aa15.28■□□□□ 0.04
SOX9-AS1-210ENST00000533039 NUP160Q12769 1436 aa15.26■□□□□ 0.03
SOX9-AS1-210ENST00000533039 SHROOM2Q13796 1616 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms