RNA–Protein interactions for RNA: ENST00000532991.5

PAK1-217, Transcript of p21 (RAC1) activated kinase 1, humanhuman

TSL 3

Gene PAK1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK1-217ENST00000532991 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
PAK1-217ENST00000532991 AEBP2Q6ZN18 517 aaPredicted RBP21.64■■□□□ 1.05
PAK1-217ENST00000532991 ABCC9O60706 1549 aa21.6■■□□□ 1.05
PAK1-217ENST00000532991 CCDC180Q9P1Z9 1646 aa21.12■□□□□ 0.97
PAK1-217ENST00000532991 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.89
PAK1-217ENST00000532991 RB1CC1Q8TDY2 1594 aa20.26■□□□□ 0.83
PAK1-217ENST00000532991 CHIC1Q5VXU3 224 aa20.25■□□□□ 0.83
PAK1-217ENST00000532991 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.81
PAK1-217ENST00000532991 NACADO15069 1562 aa20.01■□□□□ 0.79
PAK1-217ENST00000532991 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
PAK1-217ENST00000532991 DCAF8L2P0C7V8 631 aa19.98■□□□□ 0.79
PAK1-217ENST00000532991 BICRAQ9NZM4 1560 aa19.83■□□□□ 0.77
PAK1-217ENST00000532991 MYO15BQ96JP2 1530 aa19.55■□□□□ 0.72
PAK1-217ENST00000532991 CC2D2AQ9P2K1 1620 aa19.47■□□□□ 0.71
PAK1-217ENST00000532991 CECR2Q9BXF3 1484 aa19.42■□□□□ 0.7
PAK1-217ENST00000532991 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
PAK1-217ENST00000532991 SCRIBQ14160 1630 aa19.38■□□□□ 0.69
PAK1-217ENST00000532991 EIF4G1Q04637 1599 aaKnown RBP19.31■□□□□ 0.68
PAK1-217ENST00000532991 DCAF1Q9Y4B6 1507 aa19.28■□□□□ 0.68
PAK1-217ENST00000532991 SHROOM4Q9ULL8 1493 aa19.25■□□□□ 0.67
PAK1-217ENST00000532991 DNAJC5Q9H3Z4 198 aa19.03■□□□□ 0.64
PAK1-217ENST00000532991 CUX2O14529 1486 aa18.59■□□□□ 0.57
PAK1-217ENST00000532991 ERCC6Q03468 1493 aa18.58■□□□□ 0.56
PAK1-217ENST00000532991 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
PAK1-217ENST00000532991 NESP48681 1621 aa18.51■□□□□ 0.55
PAK1-217ENST00000532991 NCAPD3P42695 1498 aa18.5■□□□□ 0.55
PAK1-217ENST00000532991 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
PAK1-217ENST00000532991 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
PAK1-217ENST00000532991 HMGXB3Q12766 1538 aa18.33■□□□□ 0.53
PAK1-217ENST00000532991 THOC2Q8NI27 1593 aaKnown RBP18.32■□□□□ 0.52
PAK1-217ENST00000532991 SMARCA2P51531 1590 aa18.31■□□□□ 0.52
PAK1-217ENST00000532991 KIF21AQ7Z4S6 1674 aa18.25■□□□□ 0.51
PAK1-217ENST00000532991 BAZ1BQ9UIG0 1483 aaKnown RBP18.24■□□□□ 0.51
PAK1-217ENST00000532991 PHF23Q9BUL5 403 aaPredicted RBP18.21■□□□□ 0.51
PAK1-217ENST00000532991 TRIM41Q8WV44 630 aa18.16■□□□□ 0.5
PAK1-217ENST00000532991 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
PAK1-217ENST00000532991 MROH2BQ7Z745 1585 aa18.13■□□□□ 0.49
PAK1-217ENST00000532991 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
PAK1-217ENST00000532991 PEG3Q9GZU2 1588 aa18.13■□□□□ 0.49
PAK1-217ENST00000532991 PDS5BQ9NTI5 1447 aa18■□□□□ 0.47
PAK1-217ENST00000532991 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
PAK1-217ENST00000532991 WIZO95785 1651 aa17.93■□□□□ 0.46
PAK1-217ENST00000532991 WDR62O43379 1518 aa17.93■□□□□ 0.46
PAK1-217ENST00000532991 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
PAK1-217ENST00000532991 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
PAK1-217ENST00000532991 FANCD2Q9BXW9 1451 aa17.77■□□□□ 0.44
PAK1-217ENST00000532991 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
PAK1-217ENST00000532991 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
PAK1-217ENST00000532991 OSCARQ8IYS5 282 aa17.69■□□□□ 0.42
PAK1-217ENST00000532991 CFTRP13569 1480 aa17.67■□□□□ 0.42
PAK1-217ENST00000532991 RIMBP3CA6NJZ7 1639 aa17.65■□□□□ 0.42
PAK1-217ENST00000532991 RIMBP3BA6NNM3 1639 aa17.65■□□□□ 0.42
PAK1-217ENST00000532991 RIMBP3Q9UFD9 1639 aa17.65■□□□□ 0.42
PAK1-217ENST00000532991 ZNF608Q9ULD9 1512 aaPredicted RBP17.58■□□□□ 0.41
PAK1-217ENST00000532991 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
PAK1-217ENST00000532991 PRDM2Q13029 1718 aa17.52■□□□□ 0.39
PAK1-217ENST00000532991 ARHGEF11O15085 1522 aa17.51■□□□□ 0.39
PAK1-217ENST00000532991 EIF4G3O43432 1585 aaKnown RBP17.44■□□□□ 0.38
PAK1-217ENST00000532991 IFT140Q96RY7 1462 aa17.43■□□□□ 0.38
PAK1-217ENST00000532991 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
PAK1-217ENST00000532991 CHD1O14646 1710 aa17.42■□□□□ 0.38
PAK1-217ENST00000532991 CCDC88BA6NC98 1476 aa17.41■□□□□ 0.38
PAK1-217ENST00000532991 CYB5RLQ6IPT4 315 aa17.4■□□□□ 0.38
PAK1-217ENST00000532991 AQRO60306 1485 aaKnown RBP eCLIP17.35■□□□□ 0.37
PAK1-217ENST00000532991 ARAP1Q96P48 1450 aa17.34■□□□□ 0.37
PAK1-217ENST00000532991 TARBP1Q13395 1621 aaKnown RBP17.32■□□□□ 0.36
PAK1-217ENST00000532991 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
PAK1-217ENST00000532991 TRHP20396 242 aaPredicted RBP17.3■□□□□ 0.36
PAK1-217ENST00000532991 DNMBPQ6XZF7 1577 aa17.3■□□□□ 0.36
PAK1-217ENST00000532991 FOXD1Q16676 465 aa17.28■□□□□ 0.36
PAK1-217ENST00000532991 FBLN2P98095 1184 aa17.27■□□□□ 0.36
PAK1-217ENST00000532991 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
PAK1-217ENST00000532991 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
PAK1-217ENST00000532991 ABCC8Q09428 1581 aa17.19■□□□□ 0.34
PAK1-217ENST00000532991 TDRD9Q8NDG6 1382 aaKnown RBP17.18■□□□□ 0.34
PAK1-217ENST00000532991 SNAPC4Q5SXM2 1469 aa17.14■□□□□ 0.33
PAK1-217ENST00000532991 CLASP1Q7Z460 1538 aa17.13■□□□□ 0.33
PAK1-217ENST00000532991 SOGA1O94964 1423 aa17.1■□□□□ 0.33
PAK1-217ENST00000532991 FGD5Q6ZNL6 1462 aa17.08■□□□□ 0.32
PAK1-217ENST00000532991 CUX1P39880 1505 aa17.04■□□□□ 0.32
PAK1-217ENST00000532991 SYNJ1O43426 1573 aa17.02■□□□□ 0.32
PAK1-217ENST00000532991 CHMP7Q8WUX9 453 aaPredicted RBP17.01■□□□□ 0.31
PAK1-217ENST00000532991 WDR97A6NE52 1622 aa17■□□□□ 0.31
PAK1-217ENST00000532991 PBRM1Q86U86 1689 aa16.99■□□□□ 0.31
PAK1-217ENST00000532991 MAGI1Q96QZ7 1491 aaPredicted RBP16.98■□□□□ 0.31
PAK1-217ENST00000532991 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
PAK1-217ENST00000532991 GRIN2BQ13224 1484 aa16.96■□□□□ 0.31
PAK1-217ENST00000532991 SYNJ2O15056 1496 aa16.95■□□□□ 0.3
PAK1-217ENST00000532991 GAPVD1Q14C86 1478 aa16.94■□□□□ 0.3
PAK1-217ENST00000532991 ABCA5Q8WWZ7 1642 aa16.87■□□□□ 0.29
PAK1-217ENST00000532991 CEP170Q5SW79 1584 aa16.82■□□□□ 0.28
PAK1-217ENST00000532991 ABCA10Q8WWZ4 1543 aa16.8■□□□□ 0.28
PAK1-217ENST00000532991 GRIN2AQ12879 1464 aa16.79■□□□□ 0.28
PAK1-217ENST00000532991 KIF13AQ9H1H9 1805 aa16.77■□□□□ 0.28
PAK1-217ENST00000532991 ADAMTS12P58397 1594 aa16.77■□□□□ 0.28
PAK1-217ENST00000532991 WRNQ14191 1432 aaPredicted RBP eCLIP16.74■□□□□ 0.27
PAK1-217ENST00000532991 SHROOM2Q13796 1616 aa16.73■□□□□ 0.27
PAK1-217ENST00000532991 NUP160Q12769 1436 aa16.72■□□□□ 0.27
PAK1-217ENST00000532991 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
PAK1-217ENST00000532991 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms