RNA–Protein interactions for RNA: ENST00000532436.5

KDM2A-214, Transcript of lysine demethylase 2A, humanhuman

TSL 3

Gene KDM2A, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-214ENST00000532436 NISCHQ9Y2I1 1504 aa22.43■■□□□ 1.18
KDM2A-214ENST00000532436 ABCC9O60706 1549 aa20.19■□□□□ 0.82
KDM2A-214ENST00000532436 CCDC180Q9P1Z9 1646 aa20.12■□□□□ 0.81
KDM2A-214ENST00000532436 RB1CC1Q8TDY2 1594 aa19.24■□□□□ 0.67
KDM2A-214ENST00000532436 NACADO15069 1562 aa19.1■□□□□ 0.65
KDM2A-214ENST00000532436 DCAF8L2P0C7V8 631 aa19.08■□□□□ 0.64
KDM2A-214ENST00000532436 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
KDM2A-214ENST00000532436 MYO15BQ96JP2 1530 aa18.84■□□□□ 0.61
KDM2A-214ENST00000532436 PABPN1Q86U42 306 aaKnown RBP eCLIP18.82■□□□□ 0.6
KDM2A-214ENST00000532436 UNC13AQ9UPW8 1703 aa18.58■□□□□ 0.57
KDM2A-214ENST00000532436 DCAF1Q9Y4B6 1507 aa18.56■□□□□ 0.56
KDM2A-214ENST00000532436 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
KDM2A-214ENST00000532436 ZCCHC6Q5VYS8 1495 aaKnown RBP18.55■□□□□ 0.56
KDM2A-214ENST00000532436 SHROOM4Q9ULL8 1493 aa18.49■□□□□ 0.55
KDM2A-214ENST00000532436 SCRIBQ14160 1630 aa18.3■□□□□ 0.52
KDM2A-214ENST00000532436 CECR2Q9BXF3 1484 aa18.23■□□□□ 0.51
KDM2A-214ENST00000532436 CC2D2AQ9P2K1 1620 aa18.2■□□□□ 0.5
KDM2A-214ENST00000532436 EIF4G1Q04637 1599 aaKnown RBP18.17■□□□□ 0.5
KDM2A-214ENST00000532436 NCAPD3P42695 1498 aa17.64■□□□□ 0.41
KDM2A-214ENST00000532436 DNAJC5Q9H3Z4 198 aa17.57■□□□□ 0.4
KDM2A-214ENST00000532436 ATAD2BQ9ULI0 1458 aa17.55■□□□□ 0.4
KDM2A-214ENST00000532436 SMARCA2P51531 1590 aa17.53■□□□□ 0.4
KDM2A-214ENST00000532436 ERCC6Q03468 1493 aa17.52■□□□□ 0.4
KDM2A-214ENST00000532436 CUX2O14529 1486 aa17.5■□□□□ 0.39
KDM2A-214ENST00000532436 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
KDM2A-214ENST00000532436 SMARCA4P51532 1647 aa17.47■□□□□ 0.39
KDM2A-214ENST00000532436 BAZ1AQ9NRL2 1556 aaPredicted RBP17.45■□□□□ 0.38
KDM2A-214ENST00000532436 BAZ1BQ9UIG0 1483 aaKnown RBP17.41■□□□□ 0.38
KDM2A-214ENST00000532436 PEG3Q9GZU2 1588 aa17.32■□□□□ 0.36
KDM2A-214ENST00000532436 NESP48681 1621 aa17.28■□□□□ 0.36
KDM2A-214ENST00000532436 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
KDM2A-214ENST00000532436 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
KDM2A-214ENST00000532436 PDS5BQ9NTI5 1447 aa17.23■□□□□ 0.35
KDM2A-214ENST00000532436 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
KDM2A-214ENST00000532436 THOC2Q8NI27 1593 aaKnown RBP17.09■□□□□ 0.33
KDM2A-214ENST00000532436 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
KDM2A-214ENST00000532436 KIF21AQ7Z4S6 1674 aa17■□□□□ 0.31
KDM2A-214ENST00000532436 WIZO95785 1651 aa16.98■□□□□ 0.31
KDM2A-214ENST00000532436 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
KDM2A-214ENST00000532436 WDR62O43379 1518 aa16.91■□□□□ 0.3
KDM2A-214ENST00000532436 RSF1Q96T23 1441 aaPredicted RBP16.91■□□□□ 0.3
KDM2A-214ENST00000532436 FANCD2Q9BXW9 1451 aa16.9■□□□□ 0.3
KDM2A-214ENST00000532436 CFTRP13569 1480 aa16.88■□□□□ 0.29
KDM2A-214ENST00000532436 TOP2AP11388 1531 aaKnown RBP16.84■□□□□ 0.29
KDM2A-214ENST00000532436 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
KDM2A-214ENST00000532436 TRIM41Q8WV44 630 aa16.77■□□□□ 0.28
KDM2A-214ENST00000532436 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
KDM2A-214ENST00000532436 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
KDM2A-214ENST00000532436 CCDC88BA6NC98 1476 aa16.66■□□□□ 0.26
KDM2A-214ENST00000532436 ABCC8Q09428 1581 aa16.62■□□□□ 0.25
KDM2A-214ENST00000532436 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
KDM2A-214ENST00000532436 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
KDM2A-214ENST00000532436 TOPBP1Q92547 1522 aa16.54■□□□□ 0.24
KDM2A-214ENST00000532436 ZNF608Q9ULD9 1512 aaPredicted RBP16.5■□□□□ 0.23
KDM2A-214ENST00000532436 DNMBPQ6XZF7 1577 aa16.48■□□□□ 0.23
KDM2A-214ENST00000532436 FBLN2P98095 1184 aa16.4■□□□□ 0.22
KDM2A-214ENST00000532436 AQRO60306 1485 aaKnown RBP eCLIP16.39■□□□□ 0.212e-6■■□□□ 13.8
KDM2A-214ENST00000532436 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
KDM2A-214ENST00000532436 POLA1P09884 1462 aaPredicted RBP16.37■□□□□ 0.21
KDM2A-214ENST00000532436 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
KDM2A-214ENST00000532436 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
KDM2A-214ENST00000532436 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
KDM2A-214ENST00000532436 SOGA1O94964 1423 aa16.36■□□□□ 0.21
KDM2A-214ENST00000532436 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
KDM2A-214ENST00000532436 TARBP1Q13395 1621 aaKnown RBP16.34■□□□□ 0.21
KDM2A-214ENST00000532436 CYB5RLQ6IPT4 315 aa16.33■□□□□ 0.2
KDM2A-214ENST00000532436 TDRD9Q8NDG6 1382 aaKnown RBP16.31■□□□□ 0.2
KDM2A-214ENST00000532436 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
KDM2A-214ENST00000532436 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
KDM2A-214ENST00000532436 WDR97A6NE52 1622 aa16.28■□□□□ 0.2
KDM2A-214ENST00000532436 FGD5Q6ZNL6 1462 aa16.26■□□□□ 0.19
KDM2A-214ENST00000532436 GRIN2BQ13224 1484 aa16.22■□□□□ 0.19
KDM2A-214ENST00000532436 MAGI1Q96QZ7 1491 aaPredicted RBP16.22■□□□□ 0.19
KDM2A-214ENST00000532436 CHD1O14646 1710 aa16.22■□□□□ 0.19
KDM2A-214ENST00000532436 TRHP20396 242 aaPredicted RBP16.22■□□□□ 0.19
KDM2A-214ENST00000532436 SNAPC4Q5SXM2 1469 aa16.21■□□□□ 0.19
KDM2A-214ENST00000532436 SUPT5HO00267 1087 aaKnown RBP16.2■□□□□ 0.18
KDM2A-214ENST00000532436 CUX1P39880 1505 aa16.19■□□□□ 0.18
KDM2A-214ENST00000532436 ARAP1Q96P48 1450 aa16.17■□□□□ 0.18
KDM2A-214ENST00000532436 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
KDM2A-214ENST00000532436 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
KDM2A-214ENST00000532436 GAPVD1Q14C86 1478 aa16.14■□□□□ 0.17
KDM2A-214ENST00000532436 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
KDM2A-214ENST00000532436 CLASP1Q7Z460 1538 aa16.1■□□□□ 0.17
KDM2A-214ENST00000532436 ABCA10Q8WWZ4 1543 aa16.09■□□□□ 0.17
KDM2A-214ENST00000532436 CHIC1Q5VXU3 224 aa16.01■□□□□ 0.15
KDM2A-214ENST00000532436 PBRM1Q86U86 1689 aa16■□□□□ 0.15
KDM2A-214ENST00000532436 ABCA5Q8WWZ7 1642 aa16■□□□□ 0.15
KDM2A-214ENST00000532436 GRIN2AQ12879 1464 aa15.97■□□□□ 0.15
KDM2A-214ENST00000532436 FHAD1B1AJZ9 1412 aa15.96■□□□□ 0.15
KDM2A-214ENST00000532436 TOP2BQ02880 1626 aa15.95■□□□□ 0.14
KDM2A-214ENST00000532436 NUP160Q12769 1436 aa15.92■□□□□ 0.14
KDM2A-214ENST00000532436 BIVM-ERCC5R4GMW8 1640 aa15.91■□□□□ 0.14
KDM2A-214ENST00000532436 ERICH3Q5RHP9 1530 aa15.91■□□□□ 0.14
KDM2A-214ENST00000532436 ADAMTS12P58397 1594 aa15.9■□□□□ 0.14
KDM2A-214ENST00000532436 CEP170Q5SW79 1584 aa15.84■□□□□ 0.13
KDM2A-214ENST00000532436 JPH4Q96JJ6 628 aa15.84■□□□□ 0.13
KDM2A-214ENST00000532436 NPM1P06748 294 aaKnown RBP eCLIP15.81■□□□□ 0.12
KDM2A-214ENST00000532436 PRG4Q92954 1404 aaPredicted RBP15.81■□□□□ 0.12
KDM2A-214ENST00000532436 SHROOM2Q13796 1616 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms