RNA–Protein interactions for RNA: ENST00000532169.5

MS4A6A-216, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 2 BASIC

Gene MS4A6A, Length 1,136 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-216ENST00000532169 AEBP2Q6ZN18 517 aaPredicted RBP28.02■■■□□ 2.08
MS4A6A-216ENST00000532169 CHIC1Q5VXU3 224 aa27.32■■□□□ 1.96
MS4A6A-216ENST00000532169 NISCHQ9Y2I1 1504 aa26.75■■□□□ 1.87
MS4A6A-216ENST00000532169 PHF23Q9BUL5 403 aaPredicted RBP24■■□□□ 1.43
MS4A6A-216ENST00000532169 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
MS4A6A-216ENST00000532169 SENP3Q9H4L4 574 aaPredicted RBP23.85■■□□□ 1.41
MS4A6A-216ENST00000532169 ABCC9O60706 1549 aa23.76■■□□□ 1.39
MS4A6A-216ENST00000532169 RB1CC1Q8TDY2 1594 aa22.62■■□□□ 1.21
MS4A6A-216ENST00000532169 NACADO15069 1562 aa22.53■■□□□ 1.2
MS4A6A-216ENST00000532169 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
MS4A6A-216ENST00000532169 UNC13AQ9UPW8 1703 aa22.28■■□□□ 1.16
MS4A6A-216ENST00000532169 MYO15BQ96JP2 1530 aa22.27■■□□□ 1.16
MS4A6A-216ENST00000532169 DNAJC5BQ9UF47 199 aa22.25■■□□□ 1.15
MS4A6A-216ENST00000532169 ZCCHC6Q5VYS8 1495 aaKnown RBP22.21■■□□□ 1.15
MS4A6A-216ENST00000532169 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
MS4A6A-216ENST00000532169 PABPN1Q86U42 306 aaKnown RBP eCLIP22.17■■□□□ 1.14
MS4A6A-216ENST00000532169 FOXD1Q16676 465 aa22.11■■□□□ 1.13
MS4A6A-216ENST00000532169 BICRAQ9NZM4 1560 aa22.09■■□□□ 1.13
MS4A6A-216ENST00000532169 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
MS4A6A-216ENST00000532169 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
MS4A6A-216ENST00000532169 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.05
MS4A6A-216ENST00000532169 CC2D2AQ9P2K1 1620 aa21.48■■□□□ 1.03
MS4A6A-216ENST00000532169 EIF4G1Q04637 1599 aaKnown RBP21.46■■□□□ 1.03
MS4A6A-216ENST00000532169 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
MS4A6A-216ENST00000532169 ADRA2BP18089 450 aa21.2■□□□□ 0.98
MS4A6A-216ENST00000532169 PPP6R1Q9UPN7 881 aa21.2■□□□□ 0.98
MS4A6A-216ENST00000532169 PIAS4Q8N2W9 510 aaPredicted RBP20.85■□□□□ 0.93
MS4A6A-216ENST00000532169 SMARCA4P51532 1647 aa20.82■□□□□ 0.92
MS4A6A-216ENST00000532169 NCAPD3P42695 1498 aa20.82■□□□□ 0.92
MS4A6A-216ENST00000532169 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
MS4A6A-216ENST00000532169 BAZ1AQ9NRL2 1556 aaPredicted RBP20.69■□□□□ 0.9
MS4A6A-216ENST00000532169 SMARCA2P51531 1590 aa20.68■□□□□ 0.9
MS4A6A-216ENST00000532169 HMGXB3Q12766 1538 aa20.66■□□□□ 0.9
MS4A6A-216ENST00000532169 MROH2BQ7Z745 1585 aa20.65■□□□□ 0.9
MS4A6A-216ENST00000532169 PEG3Q9GZU2 1588 aa20.62■□□□□ 0.89
MS4A6A-216ENST00000532169 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
MS4A6A-216ENST00000532169 NESP48681 1621 aa20.51■□□□□ 0.87
MS4A6A-216ENST00000532169 MSH5O43196 834 aa20.45■□□□□ 0.86
MS4A6A-216ENST00000532169 POTEDQ86YR6 584 aa20.42■□□□□ 0.86
MS4A6A-216ENST00000532169 WIZO95785 1651 aa20.42■□□□□ 0.86
MS4A6A-216ENST00000532169 ERCC6Q03468 1493 aa20.4■□□□□ 0.86
MS4A6A-216ENST00000532169 CUX2O14529 1486 aa20.33■□□□□ 0.85
MS4A6A-216ENST00000532169 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
MS4A6A-216ENST00000532169 RSF1Q96T23 1441 aaPredicted RBP20.27■□□□□ 0.83
MS4A6A-216ENST00000532169 KIF21AQ7Z4S6 1674 aa20.24■□□□□ 0.83
MS4A6A-216ENST00000532169 THOC2Q8NI27 1593 aaKnown RBP20.24■□□□□ 0.83
MS4A6A-216ENST00000532169 DNAJC5Q9H3Z4 198 aa20.19■□□□□ 0.82
MS4A6A-216ENST00000532169 CADPSQ9ULU8 1353 aa20.19■□□□□ 0.82
MS4A6A-216ENST00000532169 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
MS4A6A-216ENST00000532169 TOP2AP11388 1531 aaKnown RBP20.1■□□□□ 0.81
MS4A6A-216ENST00000532169 CFTRP13569 1480 aa20.01■□□□□ 0.79
MS4A6A-216ENST00000532169 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
MS4A6A-216ENST00000532169 WDR62O43379 1518 aa19.97■□□□□ 0.79
MS4A6A-216ENST00000532169 FANCD2Q9BXW9 1451 aa19.96■□□□□ 0.79
MS4A6A-216ENST00000532169 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
MS4A6A-216ENST00000532169 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
MS4A6A-216ENST00000532169 URB2Q14146 1524 aaKnown RBP19.84■□□□□ 0.77
MS4A6A-216ENST00000532169 PRDM2Q13029 1718 aa19.84■□□□□ 0.77
MS4A6A-216ENST00000532169 TOPBP1Q92547 1522 aa19.62■□□□□ 0.73
MS4A6A-216ENST00000532169 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
MS4A6A-216ENST00000532169 DNMBPQ6XZF7 1577 aa19.54■□□□□ 0.72
MS4A6A-216ENST00000532169 IFT140Q96RY7 1462 aa19.53■□□□□ 0.72
MS4A6A-216ENST00000532169 PPP4R3CPQ6ZMV5 832 aa19.52■□□□□ 0.72
MS4A6A-216ENST00000532169 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
MS4A6A-216ENST00000532169 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
MS4A6A-216ENST00000532169 SCAF1Q9H7N4 1312 aaKnown RBP19.46■□□□□ 0.71
MS4A6A-216ENST00000532169 SUPT5HO00267 1087 aaKnown RBP19.45■□□□□ 0.7
MS4A6A-216ENST00000532169 POLA1P09884 1462 aaPredicted RBP19.44■□□□□ 0.7
MS4A6A-216ENST00000532169 OSCARQ8IYS5 282 aa19.43■□□□□ 0.7
MS4A6A-216ENST00000532169 EIF4G3O43432 1585 aaKnown RBP19.42■□□□□ 0.7
MS4A6A-216ENST00000532169 AQRO60306 1485 aaKnown RBP eCLIP19.4■□□□□ 0.7
MS4A6A-216ENST00000532169 RAD54L2Q9Y4B4 1467 aa19.4■□□□□ 0.7
MS4A6A-216ENST00000532169 CUX1P39880 1505 aa19.38■□□□□ 0.69
MS4A6A-216ENST00000532169 TRIM41Q8WV44 630 aa19.34■□□□□ 0.69
MS4A6A-216ENST00000532169 FGD5Q6ZNL6 1462 aa19.33■□□□□ 0.68
MS4A6A-216ENST00000532169 SOGA1O94964 1423 aa19.32■□□□□ 0.68
MS4A6A-216ENST00000532169 TDRD9Q8NDG6 1382 aaKnown RBP19.29■□□□□ 0.68
MS4A6A-216ENST00000532169 CHD1O14646 1710 aa19.28■□□□□ 0.68
MS4A6A-216ENST00000532169 MAPK8IP2Q13387 824 aaPredicted RBP19.25■□□□□ 0.67
MS4A6A-216ENST00000532169 RIMBP3CA6NJZ7 1639 aa19.24■□□□□ 0.67
MS4A6A-216ENST00000532169 RIMBP3BA6NNM3 1639 aa19.24■□□□□ 0.67
MS4A6A-216ENST00000532169 RIMBP3Q9UFD9 1639 aa19.24■□□□□ 0.67
MS4A6A-216ENST00000532169 WDR97A6NE52 1622 aa19.23■□□□□ 0.67
MS4A6A-216ENST00000532169 SNAPC4Q5SXM2 1469 aa19.17■□□□□ 0.66
MS4A6A-216ENST00000532169 ARHGEF11O15085 1522 aa19.17■□□□□ 0.66
MS4A6A-216ENST00000532169 FBLN2P98095 1184 aa19.14■□□□□ 0.65
MS4A6A-216ENST00000532169 ABCA10Q8WWZ4 1543 aa19.11■□□□□ 0.65
MS4A6A-216ENST00000532169 GRIN2BQ13224 1484 aa19.11■□□□□ 0.65
MS4A6A-216ENST00000532169 SYNJ1O43426 1573 aa19.1■□□□□ 0.65
MS4A6A-216ENST00000532169 PBRM1Q86U86 1689 aa19.1■□□□□ 0.65
MS4A6A-216ENST00000532169 ABCA5Q8WWZ7 1642 aa19.09■□□□□ 0.65
MS4A6A-216ENST00000532169 BIVM-ERCC5R4GMW8 1640 aa19.09■□□□□ 0.65
MS4A6A-216ENST00000532169 GAPVD1Q14C86 1478 aa19.09■□□□□ 0.65
MS4A6A-216ENST00000532169 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
MS4A6A-216ENST00000532169 TOP2BQ02880 1626 aa19.07■□□□□ 0.64
MS4A6A-216ENST00000532169 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
MS4A6A-216ENST00000532169 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
MS4A6A-216ENST00000532169 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
MS4A6A-216ENST00000532169 ARAP1Q96P48 1450 aa19.03■□□□□ 0.64
MS4A6A-216ENST00000532169 CHMP7Q8WUX9 453 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms