RNA–Protein interactions for RNA: ENST00000531607.5

CHEK1-212, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-212ENST00000531607 NISCHQ9Y2I1 1504 aa26.96■■□□□ 1.91
CHEK1-212ENST00000531607 ABCC9O60706 1549 aa24.56■■□□□ 1.52
CHEK1-212ENST00000531607 CCDC180Q9P1Z9 1646 aa24.49■■□□□ 1.51
CHEK1-212ENST00000531607 AEBP2Q6ZN18 517 aaPredicted RBP23.97■■□□□ 1.43
CHEK1-212ENST00000531607 RB1CC1Q8TDY2 1594 aa23.34■■□□□ 1.33
CHEK1-212ENST00000531607 DNAJC5BQ9UF47 199 aa23.1■■□□□ 1.29
CHEK1-212ENST00000531607 NACADO15069 1562 aa23.07■■□□□ 1.28
CHEK1-212ENST00000531607 UNC13AQ9UPW8 1703 aa23.01■■□□□ 1.27
CHEK1-212ENST00000531607 DCAF8L2P0C7V8 631 aa22.75■■□□□ 1.23
CHEK1-212ENST00000531607 PABPN1Q86U42 306 aaKnown RBP eCLIP22.71■■□□□ 1.23
CHEK1-212ENST00000531607 BICRAQ9NZM4 1560 aa22.64■■□□□ 1.22
CHEK1-212ENST00000531607 MYO15BQ96JP2 1530 aa22.62■■□□□ 1.21
CHEK1-212ENST00000531607 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
CHEK1-212ENST00000531607 ZCCHC6Q5VYS8 1495 aaKnown RBP22.32■■□□□ 1.16
CHEK1-212ENST00000531607 SHROOM4Q9ULL8 1493 aa22.29■■□□□ 1.16
CHEK1-212ENST00000531607 DCAF1Q9Y4B6 1507 aa22.26■■□□□ 1.15
CHEK1-212ENST00000531607 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
CHEK1-212ENST00000531607 CC2D2AQ9P2K1 1620 aa22.24■■□□□ 1.15
CHEK1-212ENST00000531607 CECR2Q9BXF3 1484 aa22.13■■□□□ 1.13
CHEK1-212ENST00000531607 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
CHEK1-212ENST00000531607 DNAJC5Q9H3Z4 198 aa21.4■■□□□ 1.02
CHEK1-212ENST00000531607 CUX2O14529 1486 aa21.27■■□□□ 1
CHEK1-212ENST00000531607 ERCC6Q03468 1493 aa21.25■□□□□ 0.99
CHEK1-212ENST00000531607 NCAPD3P42695 1498 aa21.2■□□□□ 0.98
CHEK1-212ENST00000531607 SMARCA4P51532 1647 aa21.18■□□□□ 0.98
CHEK1-212ENST00000531607 SMARCA2P51531 1590 aa21.14■□□□□ 0.98
CHEK1-212ENST00000531607 HMGXB3Q12766 1538 aa21.14■□□□□ 0.98
CHEK1-212ENST00000531607 ATAD2BQ9ULI0 1458 aa21.13■□□□□ 0.97
CHEK1-212ENST00000531607 NESP48681 1621 aa21.03■□□□□ 0.96
CHEK1-212ENST00000531607 BAZ1AQ9NRL2 1556 aaPredicted RBP20.99■□□□□ 0.95
CHEK1-212ENST00000531607 BAZ1BQ9UIG0 1483 aaKnown RBP20.98■□□□□ 0.95
CHEK1-212ENST00000531607 THOC2Q8NI27 1593 aaKnown RBP20.97■□□□□ 0.95
CHEK1-212ENST00000531607 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
CHEK1-212ENST00000531607 PEG3Q9GZU2 1588 aa20.93■□□□□ 0.94
CHEK1-212ENST00000531607 LAMC3Q9Y6N6 1575 aa20.9■□□□□ 0.94
CHEK1-212ENST00000531607 MROH2BQ7Z745 1585 aa20.78■□□□□ 0.92
CHEK1-212ENST00000531607 PDS5BQ9NTI5 1447 aa20.68■□□□□ 0.9
CHEK1-212ENST00000531607 SENP3Q9H4L4 574 aaPredicted RBP20.64■□□□□ 0.89
CHEK1-212ENST00000531607 WIZO95785 1651 aa20.61■□□□□ 0.89
CHEK1-212ENST00000531607 MRC2Q9UBG0 1479 aa20.57■□□□□ 0.88
CHEK1-212ENST00000531607 WDR62O43379 1518 aa20.57■□□□□ 0.88
CHEK1-212ENST00000531607 CADPSQ9ULU8 1353 aa20.53■□□□□ 0.88
CHEK1-212ENST00000531607 CEP164Q9UPV0 1460 aa20.46■□□□□ 0.87
CHEK1-212ENST00000531607 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
CHEK1-212ENST00000531607 PRDM2Q13029 1718 aa20.41■□□□□ 0.86
CHEK1-212ENST00000531607 FANCD2Q9BXW9 1451 aa20.37■□□□□ 0.85
CHEK1-212ENST00000531607 TOP2AP11388 1531 aaKnown RBP20.29■□□□□ 0.84
CHEK1-212ENST00000531607 CFTRP13569 1480 aa20.29■□□□□ 0.84
CHEK1-212ENST00000531607 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
CHEK1-212ENST00000531607 URB2Q14146 1524 aaKnown RBP20.23■□□□□ 0.83
CHEK1-212ENST00000531607 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
CHEK1-212ENST00000531607 OSCARQ8IYS5 282 aa20.13■□□□□ 0.81
CHEK1-212ENST00000531607 RIMBP3CA6NJZ7 1639 aa20.12■□□□□ 0.81
CHEK1-212ENST00000531607 RIMBP3BA6NNM3 1639 aa20.12■□□□□ 0.81
CHEK1-212ENST00000531607 RIMBP3Q9UFD9 1639 aa20.12■□□□□ 0.81
CHEK1-212ENST00000531607 EIF4G3O43432 1585 aaKnown RBP20.03■□□□□ 0.8
CHEK1-212ENST00000531607 IFT140Q96RY7 1462 aa20.02■□□□□ 0.8
CHEK1-212ENST00000531607 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.79
CHEK1-212ENST00000531607 CHD1O14646 1710 aa20.01■□□□□ 0.79
CHEK1-212ENST00000531607 TOPBP1Q92547 1522 aa19.98■□□□□ 0.79
CHEK1-212ENST00000531607 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
CHEK1-212ENST00000531607 ARHGEF11O15085 1522 aa19.96■□□□□ 0.79
CHEK1-212ENST00000531607 DNMBPQ6XZF7 1577 aa19.94■□□□□ 0.78
CHEK1-212ENST00000531607 ABCC8Q09428 1581 aa19.91■□□□□ 0.78
CHEK1-212ENST00000531607 TARBP1Q13395 1621 aaKnown RBP19.88■□□□□ 0.77
CHEK1-212ENST00000531607 AQRO60306 1485 aaKnown RBP eCLIP19.76■□□□□ 0.751e-7■■■■■ 30.9
CHEK1-212ENST00000531607 POLA1P09884 1462 aaPredicted RBP19.75■□□□□ 0.75
CHEK1-212ENST00000531607 ARAP1Q96P48 1450 aa19.72■□□□□ 0.75
CHEK1-212ENST00000531607 CYB5RLQ6IPT4 315 aa19.69■□□□□ 0.74
CHEK1-212ENST00000531607 WDR97A6NE52 1622 aa19.69■□□□□ 0.74
CHEK1-212ENST00000531607 FBLN2P98095 1184 aa19.66■□□□□ 0.74
CHEK1-212ENST00000531607 RAD54L2Q9Y4B4 1467 aa19.66■□□□□ 0.74
CHEK1-212ENST00000531607 PBRM1Q86U86 1689 aa19.64■□□□□ 0.73
CHEK1-212ENST00000531607 CLASP1Q7Z460 1538 aa19.62■□□□□ 0.73
CHEK1-212ENST00000531607 SNAPC4Q5SXM2 1469 aa19.62■□□□□ 0.73
CHEK1-212ENST00000531607 SYNJ1O43426 1573 aa19.61■□□□□ 0.73
CHEK1-212ENST00000531607 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
CHEK1-212ENST00000531607 SOGA1O94964 1423 aa19.59■□□□□ 0.73
CHEK1-212ENST00000531607 TRHP20396 242 aaPredicted RBP19.59■□□□□ 0.73
CHEK1-212ENST00000531607 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
CHEK1-212ENST00000531607 CUX1P39880 1505 aa19.56■□□□□ 0.72
CHEK1-212ENST00000531607 MAGI1Q96QZ7 1491 aaPredicted RBP19.55■□□□□ 0.72
CHEK1-212ENST00000531607 GRIN2BQ13224 1484 aa19.5■□□□□ 0.71
CHEK1-212ENST00000531607 SYNJ2O15056 1496 aa19.48■□□□□ 0.71
CHEK1-212ENST00000531607 ABCA5Q8WWZ7 1642 aa19.45■□□□□ 0.7
CHEK1-212ENST00000531607 CHMP7Q8WUX9 453 aaPredicted RBP19.45■□□□□ 0.7
CHEK1-212ENST00000531607 GAPVD1Q14C86 1478 aa19.4■□□□□ 0.7
CHEK1-212ENST00000531607 ABCA10Q8WWZ4 1543 aa19.35■□□□□ 0.69
CHEK1-212ENST00000531607 ADAMTS12P58397 1594 aa19.32■□□□□ 0.68
CHEK1-212ENST00000531607 ERCC6L2Q5T890 1561 aa19.29■□□□□ 0.68
CHEK1-212ENST00000531607 BIVM-ERCC5R4GMW8 1640 aa19.29■□□□□ 0.68
CHEK1-212ENST00000531607 GRIN2AQ12879 1464 aa19.28■□□□□ 0.68
CHEK1-212ENST00000531607 CEP170Q5SW79 1584 aa19.27■□□□□ 0.68
CHEK1-212ENST00000531607 FOXD1Q16676 465 aa19.27■□□□□ 0.68
CHEK1-212ENST00000531607 SHROOM2Q13796 1616 aa19.25■□□□□ 0.67
CHEK1-212ENST00000531607 KIF13AQ9H1H9 1805 aa19.23■□□□□ 0.67
CHEK1-212ENST00000531607 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
CHEK1-212ENST00000531607 WRNQ14191 1432 aaPredicted RBP eCLIP19.18■□□□□ 0.66
CHEK1-212ENST00000531607 NUP160Q12769 1436 aa19.17■□□□□ 0.66
CHEK1-212ENST00000531607 ERICH3Q5RHP9 1530 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms