RNA–Protein interactions for RNA: ENST00000530828.1

UBTF-211, Transcript of upstream binding transcription factor, humanhuman

TSL 5

Gene UBTF, Length 721 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-211ENST00000530828 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
UBTF-211ENST00000530828 CCDC180Q9P1Z9 1646 aa26.55■■□□□ 1.84
UBTF-211ENST00000530828 ABCC9O60706 1549 aa25.93■■□□□ 1.74
UBTF-211ENST00000530828 AEBP2Q6ZN18 517 aaPredicted RBP25.3■■□□□ 1.64
UBTF-211ENST00000530828 RB1CC1Q8TDY2 1594 aa24.98■■□□□ 1.59
UBTF-211ENST00000530828 NACADO15069 1562 aa24.93■■□□□ 1.58
UBTF-211ENST00000530828 MYO15BQ96JP2 1530 aa24.78■■□□□ 1.56
UBTF-211ENST00000530828 ZCCHC6Q5VYS8 1495 aaKnown RBP24.69■■□□□ 1.54
UBTF-211ENST00000530828 DCAF8L2P0C7V8 631 aa24.63■■□□□ 1.53
UBTF-211ENST00000530828 DCAF1Q9Y4B6 1507 aa24.61■■□□□ 1.53
UBTF-211ENST00000530828 UNC13AQ9UPW8 1703 aa24.52■■□□□ 1.52
UBTF-211ENST00000530828 BICRAQ9NZM4 1560 aa24.24■■□□□ 1.47
UBTF-211ENST00000530828 PABPN1Q86U42 306 aaKnown RBP eCLIP24.12■■□□□ 1.45
UBTF-211ENST00000530828 SCRIBQ14160 1630 aa24.08■■□□□ 1.45
UBTF-211ENST00000530828 SHROOM4Q9ULL8 1493 aa24.02■■□□□ 1.44
UBTF-211ENST00000530828 DNAJC5BQ9UF47 199 aa23.88■■□□□ 1.41
UBTF-211ENST00000530828 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
UBTF-211ENST00000530828 EIF4G1Q04637 1599 aaKnown RBP23.59■■□□□ 1.37
UBTF-211ENST00000530828 CC2D2AQ9P2K1 1620 aa23.52■■□□□ 1.36
UBTF-211ENST00000530828 CECR2Q9BXF3 1484 aa23.34■■□□□ 1.33
UBTF-211ENST00000530828 SMARCA4P51532 1647 aa23.08■■□□□ 1.28
UBTF-211ENST00000530828 BAZ1AQ9NRL2 1556 aaPredicted RBP23.01■■□□□ 1.27
UBTF-211ENST00000530828 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
UBTF-211ENST00000530828 SMARCA2P51531 1590 aa22.94■■□□□ 1.26
UBTF-211ENST00000530828 ATAD2BQ9ULI0 1458 aa22.93■■□□□ 1.26
UBTF-211ENST00000530828 PEG3Q9GZU2 1588 aa22.89■■□□□ 1.26
UBTF-211ENST00000530828 HMGXB3Q12766 1538 aa22.89■■□□□ 1.26
UBTF-211ENST00000530828 MROH2BQ7Z745 1585 aa22.83■■□□□ 1.25
UBTF-211ENST00000530828 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
UBTF-211ENST00000530828 WIZO95785 1651 aa22.6■■□□□ 1.21
UBTF-211ENST00000530828 RSF1Q96T23 1441 aaPredicted RBP22.49■■□□□ 1.19
UBTF-211ENST00000530828 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
UBTF-211ENST00000530828 NESP48681 1621 aa22.4■■□□□ 1.18
UBTF-211ENST00000530828 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
UBTF-211ENST00000530828 ERCC6Q03468 1493 aa22.36■■□□□ 1.17
UBTF-211ENST00000530828 CUX2O14529 1486 aa22.26■■□□□ 1.15
UBTF-211ENST00000530828 CADPSQ9ULU8 1353 aa22.25■■□□□ 1.15
UBTF-211ENST00000530828 KIF21AQ7Z4S6 1674 aa22.24■■□□□ 1.15
UBTF-211ENST00000530828 PDS5BQ9NTI5 1447 aa22.21■■□□□ 1.15
UBTF-211ENST00000530828 THOC2Q8NI27 1593 aaKnown RBP22.2■■□□□ 1.14
UBTF-211ENST00000530828 CFTRP13569 1480 aa22.12■■□□□ 1.13
UBTF-211ENST00000530828 PRDM2Q13029 1718 aa22.11■■□□□ 1.13
UBTF-211ENST00000530828 CCDC88BA6NC98 1476 aa22.05■■□□□ 1.12
UBTF-211ENST00000530828 FANCD2Q9BXW9 1451 aa22■■□□□ 1.11
UBTF-211ENST00000530828 MRC2Q9UBG0 1479 aa22■■□□□ 1.11
UBTF-211ENST00000530828 CEP164Q9UPV0 1460 aa22■■□□□ 1.11
UBTF-211ENST00000530828 WDR62O43379 1518 aa21.97■■□□□ 1.11
UBTF-211ENST00000530828 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
UBTF-211ENST00000530828 SENP3Q9H4L4 574 aaPredicted RBP21.74■■□□□ 1.07
UBTF-211ENST00000530828 SUPT5HO00267 1087 aaKnown RBP21.68■■□□□ 1.06
UBTF-211ENST00000530828 ABCC8Q09428 1581 aa21.68■■□□□ 1.06
UBTF-211ENST00000530828 DNAJC5Q9H3Z4 198 aa21.66■■□□□ 1.06
UBTF-211ENST00000530828 TOPBP1Q92547 1522 aa21.65■■□□□ 1.06
UBTF-211ENST00000530828 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
UBTF-211ENST00000530828 IFT140Q96RY7 1462 aa21.55■■□□□ 1.04
UBTF-211ENST00000530828 TARBP1Q13395 1621 aaKnown RBP21.48■■□□□ 1.03
UBTF-211ENST00000530828 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.03
UBTF-211ENST00000530828 CUX1P39880 1505 aa21.43■■□□□ 1.02
UBTF-211ENST00000530828 ZNF608Q9ULD9 1512 aaPredicted RBP21.43■■□□□ 1.02
UBTF-211ENST00000530828 EIF4G3O43432 1585 aaKnown RBP21.41■■□□□ 1.02
UBTF-211ENST00000530828 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
UBTF-211ENST00000530828 WDR97A6NE52 1622 aa21.36■■□□□ 1.01
UBTF-211ENST00000530828 SOGA1O94964 1423 aa21.32■■□□□ 1
UBTF-211ENST00000530828 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
UBTF-211ENST00000530828 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
UBTF-211ENST00000530828 BIVM-ERCC5R4GMW8 1640 aa21.29■■□□□ 1
UBTF-211ENST00000530828 AQRO60306 1485 aaKnown RBP eCLIP21.27■■□□□ 11e-8■■■■□ 24
UBTF-211ENST00000530828 TOP2BQ02880 1626 aa21.26■□□□□ 0.99
UBTF-211ENST00000530828 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
UBTF-211ENST00000530828 OSCARQ8IYS5 282 aa21.21■□□□□ 0.99
UBTF-211ENST00000530828 SYNJ1O43426 1573 aa21.21■□□□□ 0.99
UBTF-211ENST00000530828 CHD1O14646 1710 aa21.21■□□□□ 0.99
UBTF-211ENST00000530828 ABCA10Q8WWZ4 1543 aa21.19■□□□□ 0.98
UBTF-211ENST00000530828 TDRD9Q8NDG6 1382 aaKnown RBP21.18■□□□□ 0.98
UBTF-211ENST00000530828 PBRM1Q86U86 1689 aa21.17■□□□□ 0.98
UBTF-211ENST00000530828 ABCA5Q8WWZ7 1642 aa21.16■□□□□ 0.98
UBTF-211ENST00000530828 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
UBTF-211ENST00000530828 MAGI1Q96QZ7 1491 aaPredicted RBP21.12■□□□□ 0.97
UBTF-211ENST00000530828 GAPVD1Q14C86 1478 aa21.1■□□□□ 0.97
UBTF-211ENST00000530828 SNAPC4Q5SXM2 1469 aa21.1■□□□□ 0.97
UBTF-211ENST00000530828 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
UBTF-211ENST00000530828 RIMBP3CA6NJZ7 1639 aa20.98■□□□□ 0.95
UBTF-211ENST00000530828 RIMBP3BA6NNM3 1639 aa20.98■□□□□ 0.95
UBTF-211ENST00000530828 RIMBP3Q9UFD9 1639 aa20.98■□□□□ 0.95
UBTF-211ENST00000530828 FBLN2P98095 1184 aa20.96■□□□□ 0.95
UBTF-211ENST00000530828 ERICH3Q5RHP9 1530 aa20.95■□□□□ 0.94
UBTF-211ENST00000530828 ADAMTS12P58397 1594 aa20.95■□□□□ 0.94
UBTF-211ENST00000530828 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
UBTF-211ENST00000530828 ARHGEF11O15085 1522 aa20.94■□□□□ 0.94
UBTF-211ENST00000530828 CHMP7Q8WUX9 453 aaPredicted RBP20.93■□□□□ 0.94
UBTF-211ENST00000530828 GRIN2AQ12879 1464 aa20.86■□□□□ 0.93
UBTF-211ENST00000530828 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
UBTF-211ENST00000530828 TRIM41Q8WV44 630 aa20.79■□□□□ 0.92
UBTF-211ENST00000530828 NUP160Q12769 1436 aa20.78■□□□□ 0.92
UBTF-211ENST00000530828 CEP170Q5SW79 1584 aa20.78■□□□□ 0.92
UBTF-211ENST00000530828 KIF27Q86VH2 1401 aa20.78■□□□□ 0.92
UBTF-211ENST00000530828 CUL7Q14999 1698 aa20.77■□□□□ 0.91
UBTF-211ENST00000530828 ARAP1Q96P48 1450 aa20.75■□□□□ 0.91
UBTF-211ENST00000530828 SHROOM2Q13796 1616 aa20.71■□□□□ 0.91
UBTF-211ENST00000530828 IGF1RP08069 1367 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms