RNA–Protein interactions for RNA: ENST00000530561.5

LPXN-205, Transcript of leupaxin, humanhuman

TSL 1 (best)

Gene LPXN, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPXN-205ENST00000530561 NISCHQ9Y2I1 1504 aa21.46■■□□□ 1.03
LPXN-205ENST00000530561 CCDC180Q9P1Z9 1646 aa18.64■□□□□ 0.57
LPXN-205ENST00000530561 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
LPXN-205ENST00000530561 DCAF1Q9Y4B6 1507 aa17.76■□□□□ 0.43
LPXN-205ENST00000530561 ABCC9O60706 1549 aa17.7■□□□□ 0.42
LPXN-205ENST00000530561 DCAF8L2P0C7V8 631 aa17.63■□□□□ 0.41
LPXN-205ENST00000530561 SHROOM4Q9ULL8 1493 aa17.61■□□□□ 0.41
LPXN-205ENST00000530561 MYO15BQ96JP2 1530 aa17.49■□□□□ 0.39
LPXN-205ENST00000530561 NACADO15069 1562 aa17.33■□□□□ 0.36
LPXN-205ENST00000530561 SCRIBQ14160 1630 aa17.15■□□□□ 0.34
LPXN-205ENST00000530561 RB1CC1Q8TDY2 1594 aa17.13■□□□□ 0.33
LPXN-205ENST00000530561 SUPT5HO00267 1087 aaKnown RBP17.01■□□□□ 0.31
LPXN-205ENST00000530561 UNC13AQ9UPW8 1703 aa16.79■□□□□ 0.28
LPXN-205ENST00000530561 RSF1Q96T23 1441 aaPredicted RBP16.72■□□□□ 0.27
LPXN-205ENST00000530561 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
LPXN-205ENST00000530561 CECR2Q9BXF3 1484 aa16.66■□□□□ 0.26
LPXN-205ENST00000530561 BICRAQ9NZM4 1560 aa16.62■□□□□ 0.25
LPXN-205ENST00000530561 MROH2BQ7Z745 1585 aa16.59■□□□□ 0.25
LPXN-205ENST00000530561 BAZ1AQ9NRL2 1556 aaPredicted RBP16.56■□□□□ 0.24
LPXN-205ENST00000530561 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
LPXN-205ENST00000530561 WIZO95785 1651 aa16.45■□□□□ 0.22
LPXN-205ENST00000530561 CHIC1Q5VXU3 224 aa16.39■□□□□ 0.21
LPXN-205ENST00000530561 TOP2AP11388 1531 aaKnown RBP16.3■□□□□ 0.2
LPXN-205ENST00000530561 PEG3Q9GZU2 1588 aa16.27■□□□□ 0.19
LPXN-205ENST00000530561 ATAD2BQ9ULI0 1458 aa16.16■□□□□ 0.18
LPXN-205ENST00000530561 SMARCA2P51531 1590 aa16.15■□□□□ 0.18
LPXN-205ENST00000530561 CCDC88BA6NC98 1476 aa16.13■□□□□ 0.17
LPXN-205ENST00000530561 EIF4G1Q04637 1599 aaKnown RBP16.1■□□□□ 0.17
LPXN-205ENST00000530561 DNAJC5BQ9UF47 199 aa16.09■□□□□ 0.17
LPXN-205ENST00000530561 BAZ1BQ9UIG0 1483 aaKnown RBP16.07■□□□□ 0.16
LPXN-205ENST00000530561 TRIM41Q8WV44 630 aa15.99■□□□□ 0.15
LPXN-205ENST00000530561 NCAPD3P42695 1498 aa15.99■□□□□ 0.15
LPXN-205ENST00000530561 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
LPXN-205ENST00000530561 CC2D2AQ9P2K1 1620 aa15.95■□□□□ 0.14
LPXN-205ENST00000530561 ABCC8Q09428 1581 aa15.83■□□□□ 0.13
LPXN-205ENST00000530561 LOC105371045A0A1W2PR82 267 aa15.75■□□□□ 0.11
LPXN-205ENST00000530561 WRNQ14191 1432 aaPredicted RBP eCLIP15.72■□□□□ 0.11
LPXN-205ENST00000530561 FAM9AQ8IZU1 332 aaPredicted RBP15.69■□□□□ 0.1
LPXN-205ENST00000530561 CFTRP13569 1480 aa15.68■□□□□ 0.1
LPXN-205ENST00000530561 SYNJ1O43426 1573 aa15.65■□□□□ 0.1
LPXN-205ENST00000530561 PRDM2Q13029 1718 aa15.61■□□□□ 0.09
LPXN-205ENST00000530561 EEA1Q15075 1411 aa15.6■□□□□ 0.09
LPXN-205ENST00000530561 CADPSQ9ULU8 1353 aa15.59■□□□□ 0.09
LPXN-205ENST00000530561 TOP2BQ02880 1626 aa15.58■□□□□ 0.08
LPXN-205ENST00000530561 SOGA1O94964 1423 aa15.58■□□□□ 0.08
LPXN-205ENST00000530561 BIVM-ERCC5R4GMW8 1640 aa15.56■□□□□ 0.08
LPXN-205ENST00000530561 CUX1P39880 1505 aa15.5■□□□□ 0.07
LPXN-205ENST00000530561 RUSC2Q8N2Y8 1516 aa15.5■□□□□ 0.07
LPXN-205ENST00000530561 CSRNP3Q8WYN3 585 aa15.48■□□□□ 0.07
LPXN-205ENST00000530561 EHMT2Q96KQ7 1210 aa15.45■□□□□ 0.06
LPXN-205ENST00000530561 FANCD2Q9BXW9 1451 aa15.42■□□□□ 0.06
LPXN-205ENST00000530561 LAMC3Q9Y6N6 1575 aa15.42■□□□□ 0.06
LPXN-205ENST00000530561 NESP48681 1621 aa15.41■□□□□ 0.06
LPXN-205ENST00000530561 GOLGA3Q08378 1498 aa15.39■□□□□ 0.05
LPXN-205ENST00000530561 KIF21BO75037 1637 aa15.38■□□□□ 0.05
LPXN-205ENST00000530561 TNIKQ9UKE5 1360 aa15.37■□□□□ 0.05
LPXN-205ENST00000530561 CEP164Q9UPV0 1460 aa15.37■□□□□ 0.05
LPXN-205ENST00000530561 KIF27Q86VH2 1401 aa15.32■□□□□ 0.04
LPXN-205ENST00000530561 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
LPXN-205ENST00000530561 FGD5Q6ZNL6 1462 aa15.3■□□□□ 0.04
LPXN-205ENST00000530561 CEP162Q5TB80 1403 aa15.29■□□□□ 0.04
LPXN-205ENST00000530561 PDS5BQ9NTI5 1447 aa15.29■□□□□ 0.04
LPXN-205ENST00000530561 UBTFP17480 764 aaKnown RBP15.29■□□□□ 0.04
LPXN-205ENST00000530561 TOPBP1Q92547 1522 aa15.27■□□□□ 0.04
LPXN-205ENST00000530561 PRXQ9BXM0 1461 aa15.26■□□□□ 0.03
LPXN-205ENST00000530561 RAPGEF2Q9Y4G8 1499 aa15.26■□□□□ 0.03
LPXN-205ENST00000530561 ERICH3Q5RHP9 1530 aa15.25■□□□□ 0.03
LPXN-205ENST00000530561 CUX2O14529 1486 aa15.24■□□□□ 0.03
LPXN-205ENST00000530561 URB2Q14146 1524 aaKnown RBP15.22■□□□□ 0.03
LPXN-205ENST00000530561 POLA1P09884 1462 aaPredicted RBP15.21■□□□□ 0.03
LPXN-205ENST00000530561 KIF21AQ7Z4S6 1674 aa15.21■□□□□ 0.02
LPXN-205ENST00000530561 PCGF6Q9BYE7 350 aa15.2■□□□□ 0.02
LPXN-205ENST00000530561 ERCC6Q03468 1493 aa15.19■□□□□ 0.02
LPXN-205ENST00000530561 TRIM26Q12899 539 aaPredicted RBP15.18■□□□□ 0.02
LPXN-205ENST00000530561 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
LPXN-205ENST00000530561 IGF1RP08069 1367 aa15.16■□□□□ 0.02
LPXN-205ENST00000530561 RAD54L2Q9Y4B4 1467 aa15.15■□□□□ 0.02
LPXN-205ENST00000530561 CLIP1P30622 1438 aa15.14■□□□□ 0.01
LPXN-205ENST00000530561 WDR97A6NE52 1622 aa15.11■□□□□ 0.01
LPXN-205ENST00000530561 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
LPXN-205ENST00000530561 CARMIL1Q5VZK9 1371 aa15.09■□□□□ 0.01
LPXN-205ENST00000530561 ABCA5Q8WWZ7 1642 aa15.04■□□□□ -0
LPXN-205ENST00000530561 VPS8Q8N3P4 1428 aa15.04■□□□□ -0
LPXN-205ENST00000530561 CUL7Q14999 1698 aa15.03■□□□□ -0
LPXN-205ENST00000530561 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
LPXN-205ENST00000530561 WDR62O43379 1518 aa15.01□□□□□ -0.01
LPXN-205ENST00000530561 GAPVD1Q14C86 1478 aa15□□□□□ -0.01
LPXN-205ENST00000530561 THOC2Q8NI27 1593 aaKnown RBP15□□□□□ -0.01
LPXN-205ENST00000530561 PPARGC1BQ86YN6 1023 aaKnown RBP14.99□□□□□ -0.01
LPXN-205ENST00000530561 TDRD9Q8NDG6 1382 aaKnown RBP14.99□□□□□ -0.01
LPXN-205ENST00000530561 ARAP1Q96P48 1450 aa14.98□□□□□ -0.01
LPXN-205ENST00000530561 RANGAP1P46060 587 aaPredicted RBP14.97□□□□□ -0.01
LPXN-205ENST00000530561 ARHGAP35Q9NRY4 1499 aa14.94□□□□□ -0.02
LPXN-205ENST00000530561 IFT140Q96RY7 1462 aa14.93□□□□□ -0.02
LPXN-205ENST00000530561 HRCP23327 699 aa14.92□□□□□ -0.02
LPXN-205ENST00000530561 PBRM1Q86U86 1689 aa14.89□□□□□ -0.03
LPXN-205ENST00000530561 CTTNBP2Q8WZ74 1663 aa14.88□□□□□ -0.03
LPXN-205ENST00000530561 APLP2Q06481 763 aa14.87□□□□□ -0.03
LPXN-205ENST00000530561 AQRO60306 1485 aaKnown RBP eCLIP14.87□□□□□ -0.03
LPXN-205ENST00000530561 GRIN2BQ13224 1484 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms