RNA–Protein interactions for RNA: ENST00000530470.1

TRIM29-215, Transcript of tripartite motif containing 29, humanhuman

TSL 2

Gene TRIM29, Length 771 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-215ENST00000530470 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.26
TRIM29-215ENST00000530470 CCDC180Q9P1Z9 1646 aa26.13■■□□□ 1.77
TRIM29-215ENST00000530470 ABCC9O60706 1549 aa25.89■■□□□ 1.74
TRIM29-215ENST00000530470 AEBP2Q6ZN18 517 aaPredicted RBP24.92■■□□□ 1.58
TRIM29-215ENST00000530470 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
TRIM29-215ENST00000530470 NACADO15069 1562 aa24.63■■□□□ 1.53
TRIM29-215ENST00000530470 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
TRIM29-215ENST00000530470 MYO15BQ96JP2 1530 aa24.36■■□□□ 1.49
TRIM29-215ENST00000530470 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
TRIM29-215ENST00000530470 UNC13AQ9UPW8 1703 aa24.2■■□□□ 1.46
TRIM29-215ENST00000530470 DCAF1Q9Y4B6 1507 aa24.14■■□□□ 1.45
TRIM29-215ENST00000530470 PABPN1Q86U42 306 aaKnown RBP eCLIP24.12■■□□□ 1.45
TRIM29-215ENST00000530470 DNAJC5BQ9UF47 199 aa24.06■■□□□ 1.44
TRIM29-215ENST00000530470 BICRAQ9NZM4 1560 aa24.02■■□□□ 1.44
TRIM29-215ENST00000530470 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
TRIM29-215ENST00000530470 SHROOM4Q9ULL8 1493 aa23.73■■□□□ 1.39
TRIM29-215ENST00000530470 EIF4G1Q04637 1599 aaKnown RBP23.41■■□□□ 1.34
TRIM29-215ENST00000530470 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
TRIM29-215ENST00000530470 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
TRIM29-215ENST00000530470 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
TRIM29-215ENST00000530470 SMARCA4P51532 1647 aa22.74■■□□□ 1.23
TRIM29-215ENST00000530470 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
TRIM29-215ENST00000530470 ATAD2BQ9ULI0 1458 aa22.69■■□□□ 1.22
TRIM29-215ENST00000530470 BAZ1AQ9NRL2 1556 aaPredicted RBP22.66■■□□□ 1.22
TRIM29-215ENST00000530470 SMARCA2P51531 1590 aa22.65■■□□□ 1.22
TRIM29-215ENST00000530470 HMGXB3Q12766 1538 aa22.59■■□□□ 1.21
TRIM29-215ENST00000530470 PEG3Q9GZU2 1588 aa22.51■■□□□ 1.19
TRIM29-215ENST00000530470 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
TRIM29-215ENST00000530470 BAZ1BQ9UIG0 1483 aaKnown RBP22.49■■□□□ 1.19
TRIM29-215ENST00000530470 ERCC6Q03468 1493 aa22.34■■□□□ 1.17
TRIM29-215ENST00000530470 NESP48681 1621 aa22.3■■□□□ 1.16
TRIM29-215ENST00000530470 WIZO95785 1651 aa22.24■■□□□ 1.15
TRIM29-215ENST00000530470 CUX2O14529 1486 aa22.23■■□□□ 1.15
TRIM29-215ENST00000530470 LAMC3Q9Y6N6 1575 aa22.2■■□□□ 1.14
TRIM29-215ENST00000530470 RSF1Q96T23 1441 aaPredicted RBP22.1■■□□□ 1.13
TRIM29-215ENST00000530470 PDS5BQ9NTI5 1447 aa22.06■■□□□ 1.12
TRIM29-215ENST00000530470 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
TRIM29-215ENST00000530470 CADPSQ9ULU8 1353 aa22.04■■□□□ 1.12
TRIM29-215ENST00000530470 KIF21AQ7Z4S6 1674 aa22.04■■□□□ 1.12
TRIM29-215ENST00000530470 TOP2AP11388 1531 aaKnown RBP21.98■■□□□ 1.11
TRIM29-215ENST00000530470 DNAJC5Q9H3Z4 198 aa21.95■■□□□ 1.1
TRIM29-215ENST00000530470 MRC2Q9UBG0 1479 aa21.85■■□□□ 1.09
TRIM29-215ENST00000530470 CFTRP13569 1480 aa21.84■■□□□ 1.09
TRIM29-215ENST00000530470 CEP164Q9UPV0 1460 aa21.82■■□□□ 1.08
TRIM29-215ENST00000530470 FANCD2Q9BXW9 1451 aa21.8■■□□□ 1.08
TRIM29-215ENST00000530470 WDR62O43379 1518 aa21.8■■□□□ 1.08
TRIM29-215ENST00000530470 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
TRIM29-215ENST00000530470 PRDM2Q13029 1718 aa21.67■■□□□ 1.06
TRIM29-215ENST00000530470 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
TRIM29-215ENST00000530470 TOPBP1Q92547 1522 aa21.41■■□□□ 1.02
TRIM29-215ENST00000530470 ABCC8Q09428 1581 aa21.39■■□□□ 1.01
TRIM29-215ENST00000530470 DNMBPQ6XZF7 1577 aa21.36■■□□□ 1.01
TRIM29-215ENST00000530470 SENP3Q9H4L4 574 aaPredicted RBP21.36■■□□□ 1.01
TRIM29-215ENST00000530470 IFT140Q96RY7 1462 aa21.36■■□□□ 1.01
TRIM29-215ENST00000530470 ZNF608Q9ULD9 1512 aaPredicted RBP21.3■■□□□ 1
TRIM29-215ENST00000530470 SUPT5HO00267 1087 aaKnown RBP21.28■■□□□ 1
TRIM29-215ENST00000530470 OSCARQ8IYS5 282 aa21.24■□□□□ 0.99
TRIM29-215ENST00000530470 EIF4G3O43432 1585 aaKnown RBP21.22■□□□□ 0.99
TRIM29-215ENST00000530470 TARBP1Q13395 1621 aaKnown RBP21.22■□□□□ 0.99
TRIM29-215ENST00000530470 POLA1P09884 1462 aaPredicted RBP21.21■□□□□ 0.99
TRIM29-215ENST00000530470 AQRO60306 1485 aaKnown RBP eCLIP21.13■□□□□ 0.97
TRIM29-215ENST00000530470 CUX1P39880 1505 aa21.13■□□□□ 0.97
TRIM29-215ENST00000530470 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
TRIM29-215ENST00000530470 SOGA1O94964 1423 aa21.12■□□□□ 0.97
TRIM29-215ENST00000530470 FGD5Q6ZNL6 1462 aa21.11■□□□□ 0.97
TRIM29-215ENST00000530470 TRIM41Q8WV44 630 aa21.08■□□□□ 0.97
TRIM29-215ENST00000530470 TDRD9Q8NDG6 1382 aaKnown RBP21.03■□□□□ 0.96
TRIM29-215ENST00000530470 WDR97A6NE52 1622 aa21.03■□□□□ 0.96
TRIM29-215ENST00000530470 CHD1O14646 1710 aa21.02■□□□□ 0.96
TRIM29-215ENST00000530470 PHF23Q9BUL5 403 aaPredicted RBP20.98■□□□□ 0.95
TRIM29-215ENST00000530470 RIMBP3CA6NJZ7 1639 aa20.96■□□□□ 0.95
TRIM29-215ENST00000530470 RIMBP3BA6NNM3 1639 aa20.96■□□□□ 0.95
TRIM29-215ENST00000530470 RIMBP3Q9UFD9 1639 aa20.96■□□□□ 0.95
TRIM29-215ENST00000530470 FBLN2P98095 1184 aa20.95■□□□□ 0.94
TRIM29-215ENST00000530470 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
TRIM29-215ENST00000530470 GRIN2BQ13224 1484 aa20.92■□□□□ 0.94
TRIM29-215ENST00000530470 ARHGEF11O15085 1522 aa20.91■□□□□ 0.94
TRIM29-215ENST00000530470 MAGI1Q96QZ7 1491 aaPredicted RBP20.89■□□□□ 0.94
TRIM29-215ENST00000530470 ABCA10Q8WWZ4 1543 aa20.88■□□□□ 0.93
TRIM29-215ENST00000530470 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
TRIM29-215ENST00000530470 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
TRIM29-215ENST00000530470 BIVM-ERCC5R4GMW8 1640 aa20.86■□□□□ 0.93
TRIM29-215ENST00000530470 WRNQ14191 1432 aaPredicted RBP eCLIP20.86■□□□□ 0.93
TRIM29-215ENST00000530470 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
TRIM29-215ENST00000530470 ABCA5Q8WWZ7 1642 aa20.85■□□□□ 0.93
TRIM29-215ENST00000530470 SYNJ1O43426 1573 aa20.84■□□□□ 0.93
TRIM29-215ENST00000530470 CHMP7Q8WUX9 453 aaPredicted RBP20.83■□□□□ 0.93
TRIM29-215ENST00000530470 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
TRIM29-215ENST00000530470 CLASP1Q7Z460 1538 aa20.77■□□□□ 0.92
TRIM29-215ENST00000530470 CYB5RLQ6IPT4 315 aa20.73■□□□□ 0.91
TRIM29-215ENST00000530470 ARAP1Q96P48 1450 aa20.71■□□□□ 0.91
TRIM29-215ENST00000530470 ADAMTS12P58397 1594 aa20.67■□□□□ 0.9
TRIM29-215ENST00000530470 GRIN2AQ12879 1464 aa20.64■□□□□ 0.89
TRIM29-215ENST00000530470 ERICH3Q5RHP9 1530 aa20.63■□□□□ 0.89
TRIM29-215ENST00000530470 FHAD1B1AJZ9 1412 aa20.61■□□□□ 0.89
TRIM29-215ENST00000530470 CEP170Q5SW79 1584 aa20.56■□□□□ 0.88
TRIM29-215ENST00000530470 NUP160Q12769 1436 aa20.56■□□□□ 0.88
TRIM29-215ENST00000530470 ERCC6L2Q5T890 1561 aa20.46■□□□□ 0.87
TRIM29-215ENST00000530470 SHROOM2Q13796 1616 aa20.45■□□□□ 0.87
TRIM29-215ENST00000530470 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms