RNA–Protein interactions for RNA: ENST00000530186.1

PABPC4-224, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 352 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-224ENST00000530186 NISCHQ9Y2I1 1504 aa18.79■□□□□ 0.6
PABPC4-224ENST00000530186 ABCC9O60706 1549 aa17.17■□□□□ 0.34
PABPC4-224ENST00000530186 CCDC180Q9P1Z9 1646 aa17.01■□□□□ 0.31
PABPC4-224ENST00000530186 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
PABPC4-224ENST00000530186 RB1CC1Q8TDY2 1594 aa16.22■□□□□ 0.19
PABPC4-224ENST00000530186 UNC13AQ9UPW8 1703 aa16.1■□□□□ 0.17
PABPC4-224ENST00000530186 AEBP2Q6ZN18 517 aaPredicted RBP16.08■□□□□ 0.16
PABPC4-224ENST00000530186 NACADO15069 1562 aa16.07■□□□□ 0.16
PABPC4-224ENST00000530186 BICRAQ9NZM4 1560 aa15.94■□□□□ 0.14
PABPC4-224ENST00000530186 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
PABPC4-224ENST00000530186 MYO15BQ96JP2 1530 aa15.8■□□□□ 0.12
PABPC4-224ENST00000530186 DCAF8L2P0C7V8 631 aa15.7■□□□□ 0.1
PABPC4-224ENST00000530186 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
PABPC4-224ENST00000530186 ZCCHC6Q5VYS8 1495 aaKnown RBP15.53■□□□□ 0.08
PABPC4-224ENST00000530186 SHROOM4Q9ULL8 1493 aa15.52■□□□□ 0.08
PABPC4-224ENST00000530186 DCAF1Q9Y4B6 1507 aa15.51■□□□□ 0.07
PABPC4-224ENST00000530186 CECR2Q9BXF3 1484 aa15.48■□□□□ 0.07
PABPC4-224ENST00000530186 EIF4G1Q04637 1599 aaKnown RBP15.46■□□□□ 0.07
PABPC4-224ENST00000530186 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
PABPC4-224ENST00000530186 CHIC1Q5VXU3 224 aa15.37■□□□□ 0.05
PABPC4-224ENST00000530186 DNAJC5Q9H3Z4 198 aa15.18■□□□□ 0.02
PABPC4-224ENST00000530186 CUX2O14529 1486 aa14.89□□□□□ -0.03
PABPC4-224ENST00000530186 NCAPD3P42695 1498 aa14.85□□□□□ -0.03
PABPC4-224ENST00000530186 ATAD2BQ9ULI0 1458 aa14.78□□□□□ -0.04
PABPC4-224ENST00000530186 NESP48681 1621 aa14.75□□□□□ -0.05
PABPC4-224ENST00000530186 HMGXB3Q12766 1538 aa14.74□□□□□ -0.05
PABPC4-224ENST00000530186 SMARCA4P51532 1647 aa14.74□□□□□ -0.05
PABPC4-224ENST00000530186 ERCC6Q03468 1493 aa14.73□□□□□ -0.05
PABPC4-224ENST00000530186 THOC2Q8NI27 1593 aaKnown RBP14.71□□□□□ -0.05
PABPC4-224ENST00000530186 SMARCA2P51531 1590 aa14.68□□□□□ -0.06
PABPC4-224ENST00000530186 PEG3Q9GZU2 1588 aa14.63□□□□□ -0.07
PABPC4-224ENST00000530186 KIF21AQ7Z4S6 1674 aa14.61□□□□□ -0.07
PABPC4-224ENST00000530186 LAMC3Q9Y6N6 1575 aa14.56□□□□□ -0.08
PABPC4-224ENST00000530186 BAZ1BQ9UIG0 1483 aaKnown RBP14.55□□□□□ -0.08
PABPC4-224ENST00000530186 BAZ1AQ9NRL2 1556 aaPredicted RBP14.55□□□□□ -0.08
PABPC4-224ENST00000530186 MROH2BQ7Z745 1585 aa14.51□□□□□ -0.09
PABPC4-224ENST00000530186 WDR62O43379 1518 aa14.38□□□□□ -0.11
PABPC4-224ENST00000530186 PDS5BQ9NTI5 1447 aa14.37□□□□□ -0.11
PABPC4-224ENST00000530186 WIZO95785 1651 aa14.34□□□□□ -0.11
PABPC4-224ENST00000530186 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
PABPC4-224ENST00000530186 MRC2Q9UBG0 1479 aa14.33□□□□□ -0.12
PABPC4-224ENST00000530186 TRIM41Q8WV44 630 aa14.28□□□□□ -0.12
PABPC4-224ENST00000530186 CEP164Q9UPV0 1460 aa14.2□□□□□ -0.14
PABPC4-224ENST00000530186 FANCD2Q9BXW9 1451 aa14.18□□□□□ -0.14
PABPC4-224ENST00000530186 URB2Q14146 1524 aaKnown RBP14.17□□□□□ -0.14
PABPC4-224ENST00000530186 CFTRP13569 1480 aa14.17□□□□□ -0.14
PABPC4-224ENST00000530186 PRDM2Q13029 1718 aa14.12□□□□□ -0.15
PABPC4-224ENST00000530186 RIMBP3CA6NJZ7 1639 aa14.11□□□□□ -0.15
PABPC4-224ENST00000530186 RIMBP3BA6NNM3 1639 aa14.11□□□□□ -0.15
PABPC4-224ENST00000530186 RIMBP3Q9UFD9 1639 aa14.11□□□□□ -0.15
PABPC4-224ENST00000530186 TOP2AP11388 1531 aaKnown RBP14.08□□□□□ -0.16
PABPC4-224ENST00000530186 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
PABPC4-224ENST00000530186 OSCARQ8IYS5 282 aa14.06□□□□□ -0.16
PABPC4-224ENST00000530186 ZNF608Q9ULD9 1512 aaPredicted RBP14.03□□□□□ -0.16
PABPC4-224ENST00000530186 ARHGEF11O15085 1522 aa13.99□□□□□ -0.17
PABPC4-224ENST00000530186 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
PABPC4-224ENST00000530186 TOPBP1Q92547 1522 aa13.94□□□□□ -0.18
PABPC4-224ENST00000530186 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
PABPC4-224ENST00000530186 CHD1O14646 1710 aa13.93□□□□□ -0.18
PABPC4-224ENST00000530186 CCDC88BA6NC98 1476 aa13.92□□□□□ -0.18
PABPC4-224ENST00000530186 TARBP1Q13395 1621 aaKnown RBP13.91□□□□□ -0.18
PABPC4-224ENST00000530186 DNMBPQ6XZF7 1577 aa13.86□□□□□ -0.19
PABPC4-224ENST00000530186 ARAP1Q96P48 1450 aa13.86□□□□□ -0.19
PABPC4-224ENST00000530186 AQRO60306 1485 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■■■■□ 19.9
PABPC4-224ENST00000530186 SENP3Q9H4L4 574 aaPredicted RBP13.78□□□□□ -0.2
PABPC4-224ENST00000530186 ABCC8Q09428 1581 aa13.78□□□□□ -0.2
PABPC4-224ENST00000530186 POLA1P09884 1462 aaPredicted RBP13.77□□□□□ -0.21
PABPC4-224ENST00000530186 CYB5RLQ6IPT4 315 aa13.76□□□□□ -0.21
PABPC4-224ENST00000530186 CLASP1Q7Z460 1538 aa13.75□□□□□ -0.21
PABPC4-224ENST00000530186 RAD54L2Q9Y4B4 1467 aa13.73□□□□□ -0.21
PABPC4-224ENST00000530186 WDR97A6NE52 1622 aa13.69□□□□□ -0.22
PABPC4-224ENST00000530186 SNAPC4Q5SXM2 1469 aa13.66□□□□□ -0.22
PABPC4-224ENST00000530186 TDRD9Q8NDG6 1382 aaKnown RBP13.65□□□□□ -0.22
PABPC4-224ENST00000530186 CUX1P39880 1505 aa13.64□□□□□ -0.23
PABPC4-224ENST00000530186 FGD5Q6ZNL6 1462 aa13.63□□□□□ -0.23
PABPC4-224ENST00000530186 SOGA1O94964 1423 aa13.62□□□□□ -0.23
PABPC4-224ENST00000530186 PBRM1Q86U86 1689 aa13.61□□□□□ -0.23
PABPC4-224ENST00000530186 TRHP20396 242 aaPredicted RBP13.6□□□□□ -0.23
PABPC4-224ENST00000530186 SYNJ1O43426 1573 aa13.59□□□□□ -0.23
PABPC4-224ENST00000530186 FBLN2P98095 1184 aa13.59□□□□□ -0.23
PABPC4-224ENST00000530186 PHF23Q9BUL5 403 aaPredicted RBP13.59□□□□□ -0.23
PABPC4-224ENST00000530186 MAGI1Q96QZ7 1491 aaPredicted RBP13.59□□□□□ -0.23
PABPC4-224ENST00000530186 SYNJ2O15056 1496 aa13.55□□□□□ -0.24
PABPC4-224ENST00000530186 ERCC6L2Q5T890 1561 aa13.55□□□□□ -0.24
PABPC4-224ENST00000530186 ABCA5Q8WWZ7 1642 aa13.55□□□□□ -0.24
PABPC4-224ENST00000530186 GRIN2BQ13224 1484 aa13.55□□□□□ -0.24
PABPC4-224ENST00000530186 GAPVD1Q14C86 1478 aa13.51□□□□□ -0.25
PABPC4-224ENST00000530186 ABCA10Q8WWZ4 1543 aa13.48□□□□□ -0.25
PABPC4-224ENST00000530186 KIF13AQ9H1H9 1805 aa13.48□□□□□ -0.25
PABPC4-224ENST00000530186 CHMP7Q8WUX9 453 aaPredicted RBP13.47□□□□□ -0.25
PABPC4-224ENST00000530186 SHROOM2Q13796 1616 aa13.46□□□□□ -0.26
PABPC4-224ENST00000530186 CEP170Q5SW79 1584 aa13.45□□□□□ -0.26
PABPC4-224ENST00000530186 ADAMTS12P58397 1594 aa13.43□□□□□ -0.26
PABPC4-224ENST00000530186 NUP160Q12769 1436 aa13.41□□□□□ -0.26
PABPC4-224ENST00000530186 GRIN2AQ12879 1464 aa13.41□□□□□ -0.26
PABPC4-224ENST00000530186 BIVM-ERCC5R4GMW8 1640 aa13.38□□□□□ -0.27
PABPC4-224ENST00000530186 TOP2BQ02880 1626 aa13.33□□□□□ -0.28
PABPC4-224ENST00000530186 FHAD1B1AJZ9 1412 aa13.28□□□□□ -0.28
PABPC4-224ENST00000530186 ERICH3Q5RHP9 1530 aa13.28□□□□□ -0.28
PABPC4-224ENST00000530186 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms