RNA–Protein interactions for RNA: ENST00000529718.1

CKLF-CMTM1-203, Transcript of CKLF-CMTM1 readthrough, humanhuman

APPRIS ALT2 TSL 2

Gene CKLF-CMTM1, Length 478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-203ENST00000529718 NISCHQ9Y2I1 1504 aa18.67■□□□□ 0.58
CKLF-CMTM1-203ENST00000529718 ABCC9O60706 1549 aa17.5■□□□□ 0.39
CKLF-CMTM1-203ENST00000529718 CCDC180Q9P1Z9 1646 aa16.95■□□□□ 0.3
CKLF-CMTM1-203ENST00000529718 DNAJC5BQ9UF47 199 aa16.78■□□□□ 0.28
CKLF-CMTM1-203ENST00000529718 RB1CC1Q8TDY2 1594 aa16.32■□□□□ 0.2
CKLF-CMTM1-203ENST00000529718 PABPN1Q86U42 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
CKLF-CMTM1-203ENST00000529718 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
CKLF-CMTM1-203ENST00000529718 AEBP2Q6ZN18 517 aaPredicted RBP16.14■□□□□ 0.17
CKLF-CMTM1-203ENST00000529718 NACADO15069 1562 aa16.06■□□□□ 0.16
CKLF-CMTM1-203ENST00000529718 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
CKLF-CMTM1-203ENST00000529718 BICRAQ9NZM4 1560 aa15.97■□□□□ 0.15
CKLF-CMTM1-203ENST00000529718 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
CKLF-CMTM1-203ENST00000529718 CC2D2AQ9P2K1 1620 aa15.76■□□□□ 0.11
CKLF-CMTM1-203ENST00000529718 CECR2Q9BXF3 1484 aa15.72■□□□□ 0.11
CKLF-CMTM1-203ENST00000529718 MYO15BQ96JP2 1530 aa15.59■□□□□ 0.09
CKLF-CMTM1-203ENST00000529718 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.08
CKLF-CMTM1-203ENST00000529718 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
CKLF-CMTM1-203ENST00000529718 DNAJC5Q9H3Z4 198 aa15.57■□□□□ 0.08
CKLF-CMTM1-203ENST00000529718 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.07
CKLF-CMTM1-203ENST00000529718 ZCCHC6Q5VYS8 1495 aaKnown RBP15.41■□□□□ 0.06
CKLF-CMTM1-203ENST00000529718 DCAF1Q9Y4B6 1507 aa15.27■□□□□ 0.04
CKLF-CMTM1-203ENST00000529718 CUX2O14529 1486 aa15.09■□□□□ 0.01
CKLF-CMTM1-203ENST00000529718 ERCC6Q03468 1493 aa15.06■□□□□ 0
CKLF-CMTM1-203ENST00000529718 NESP48681 1621 aa14.93□□□□□ -0.02
CKLF-CMTM1-203ENST00000529718 TRIM41Q8WV44 630 aa14.87□□□□□ -0.03
CKLF-CMTM1-203ENST00000529718 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
CKLF-CMTM1-203ENST00000529718 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
CKLF-CMTM1-203ENST00000529718 SMARCA2P51531 1590 aa14.79□□□□□ -0.04
CKLF-CMTM1-203ENST00000529718 ATAD2BQ9ULI0 1458 aa14.79□□□□□ -0.04
CKLF-CMTM1-203ENST00000529718 KIF21AQ7Z4S6 1674 aa14.75□□□□□ -0.05
CKLF-CMTM1-203ENST00000529718 SMARCA4P51532 1647 aa14.72□□□□□ -0.05
CKLF-CMTM1-203ENST00000529718 HMGXB3Q12766 1538 aa14.71□□□□□ -0.05
CKLF-CMTM1-203ENST00000529718 BAZ1BQ9UIG0 1483 aaKnown RBP14.63□□□□□ -0.07
CKLF-CMTM1-203ENST00000529718 LAMC3Q9Y6N6 1575 aa14.6□□□□□ -0.07
CKLF-CMTM1-203ENST00000529718 BAZ1AQ9NRL2 1556 aaPredicted RBP14.53□□□□□ -0.08
CKLF-CMTM1-203ENST00000529718 PEG3Q9GZU2 1588 aa14.48□□□□□ -0.09
CKLF-CMTM1-203ENST00000529718 MROH2BQ7Z745 1585 aa14.47□□□□□ -0.09
CKLF-CMTM1-203ENST00000529718 MRC2Q9UBG0 1479 aa14.47□□□□□ -0.09
CKLF-CMTM1-203ENST00000529718 PDS5BQ9NTI5 1447 aa14.46□□□□□ -0.09
CKLF-CMTM1-203ENST00000529718 WDR62O43379 1518 aa14.46□□□□□ -0.1
CKLF-CMTM1-203ENST00000529718 CADPSQ9ULU8 1353 aa14.35□□□□□ -0.11
CKLF-CMTM1-203ENST00000529718 RIMBP3CA6NJZ7 1639 aa14.35□□□□□ -0.11
CKLF-CMTM1-203ENST00000529718 RIMBP3BA6NNM3 1639 aa14.35□□□□□ -0.11
CKLF-CMTM1-203ENST00000529718 RIMBP3Q9UFD9 1639 aa14.35□□□□□ -0.11
CKLF-CMTM1-203ENST00000529718 CEP164Q9UPV0 1460 aa14.33□□□□□ -0.12
CKLF-CMTM1-203ENST00000529718 WIZO95785 1651 aa14.33□□□□□ -0.12
CKLF-CMTM1-203ENST00000529718 OSCARQ8IYS5 282 aa14.28□□□□□ -0.12
CKLF-CMTM1-203ENST00000529718 FANCD2Q9BXW9 1451 aa14.28□□□□□ -0.12
CKLF-CMTM1-203ENST00000529718 URB2Q14146 1524 aaKnown RBP14.25□□□□□ -0.13
CKLF-CMTM1-203ENST00000529718 ARHGEF11O15085 1522 aa14.21□□□□□ -0.13
CKLF-CMTM1-203ENST00000529718 ZNF608Q9ULD9 1512 aaPredicted RBP14.16□□□□□ -0.14
CKLF-CMTM1-203ENST00000529718 CFTRP13569 1480 aa14.12□□□□□ -0.15
CKLF-CMTM1-203ENST00000529718 CHD1O14646 1710 aa14.1□□□□□ -0.15
CKLF-CMTM1-203ENST00000529718 CYB5RLQ6IPT4 315 aa14.09□□□□□ -0.15
CKLF-CMTM1-203ENST00000529718 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
CKLF-CMTM1-203ENST00000529718 EIF4G3O43432 1585 aaKnown RBP14.08□□□□□ -0.16
CKLF-CMTM1-203ENST00000529718 PRDM2Q13029 1718 aa14.07□□□□□ -0.16
CKLF-CMTM1-203ENST00000529718 ARAP1Q96P48 1450 aa14.07□□□□□ -0.16
CKLF-CMTM1-203ENST00000529718 PHF23Q9BUL5 403 aaPredicted RBP14.03□□□□□ -0.16
CKLF-CMTM1-203ENST00000529718 TOP2AP11388 1531 aaKnown RBP14.01□□□□□ -0.17
CKLF-CMTM1-203ENST00000529718 IFT140Q96RY7 1462 aa14□□□□□ -0.17
CKLF-CMTM1-203ENST00000529718 TOPBP1Q92547 1522 aa13.98□□□□□ -0.17
CKLF-CMTM1-203ENST00000529718 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.18
CKLF-CMTM1-203ENST00000529718 RSF1Q96T23 1441 aaPredicted RBP13.93□□□□□ -0.18
CKLF-CMTM1-203ENST00000529718 FBLN2P98095 1184 aa13.91□□□□□ -0.18
CKLF-CMTM1-203ENST00000529718 TARBP1Q13395 1621 aaKnown RBP13.9□□□□□ -0.18
CKLF-CMTM1-203ENST00000529718 DNMBPQ6XZF7 1577 aa13.87□□□□□ -0.19
CKLF-CMTM1-203ENST00000529718 CCDC88BA6NC98 1476 aa13.86□□□□□ -0.19
CKLF-CMTM1-203ENST00000529718 CLASP1Q7Z460 1538 aa13.83□□□□□ -0.2
CKLF-CMTM1-203ENST00000529718 RAD54L2Q9Y4B4 1467 aa13.82□□□□□ -0.2
CKLF-CMTM1-203ENST00000529718 POLA1P09884 1462 aaPredicted RBP13.8□□□□□ -0.2
CKLF-CMTM1-203ENST00000529718 SNAPC4Q5SXM2 1469 aa13.8□□□□□ -0.2
CKLF-CMTM1-203ENST00000529718 TDRD9Q8NDG6 1382 aaKnown RBP13.77□□□□□ -0.21
CKLF-CMTM1-203ENST00000529718 ABCC8Q09428 1581 aa13.74□□□□□ -0.21
CKLF-CMTM1-203ENST00000529718 SYNJ1O43426 1573 aa13.73□□□□□ -0.21
CKLF-CMTM1-203ENST00000529718 ERCC6L2Q5T890 1561 aa13.7□□□□□ -0.22
CKLF-CMTM1-203ENST00000529718 FGD5Q6ZNL6 1462 aa13.68□□□□□ -0.22
CKLF-CMTM1-203ENST00000529718 GAPVD1Q14C86 1478 aa13.67□□□□□ -0.22
CKLF-CMTM1-203ENST00000529718 SOGA1O94964 1423 aa13.67□□□□□ -0.22
CKLF-CMTM1-203ENST00000529718 PBRM1Q86U86 1689 aa13.67□□□□□ -0.22
CKLF-CMTM1-203ENST00000529718 SENP3Q9H4L4 574 aaPredicted RBP13.67□□□□□ -0.22
CKLF-CMTM1-203ENST00000529718 WDR97A6NE52 1622 aa13.65□□□□□ -0.22
CKLF-CMTM1-203ENST00000529718 CHMP7Q8WUX9 453 aaPredicted RBP13.64□□□□□ -0.23
CKLF-CMTM1-203ENST00000529718 MAGI1Q96QZ7 1491 aaPredicted RBP13.63□□□□□ -0.23
CKLF-CMTM1-203ENST00000529718 CUX1P39880 1505 aa13.62□□□□□ -0.23
CKLF-CMTM1-203ENST00000529718 SYNJ2O15056 1496 aa13.61□□□□□ -0.23
CKLF-CMTM1-203ENST00000529718 KIF13AQ9H1H9 1805 aa13.61□□□□□ -0.23
CKLF-CMTM1-203ENST00000529718 GRIN2BQ13224 1484 aa13.6□□□□□ -0.23
CKLF-CMTM1-203ENST00000529718 ABCA5Q8WWZ7 1642 aa13.53□□□□□ -0.24
CKLF-CMTM1-203ENST00000529718 CEP170Q5SW79 1584 aa13.53□□□□□ -0.24
CKLF-CMTM1-203ENST00000529718 GRIN2AQ12879 1464 aa13.48□□□□□ -0.25
CKLF-CMTM1-203ENST00000529718 ADAMTS12P58397 1594 aa13.47□□□□□ -0.25
CKLF-CMTM1-203ENST00000529718 ILDR1Q86SU0 546 aaPredicted RBP13.47□□□□□ -0.25
CKLF-CMTM1-203ENST00000529718 SHROOM2Q13796 1616 aa13.45□□□□□ -0.26
CKLF-CMTM1-203ENST00000529718 ABCA10Q8WWZ4 1543 aa13.42□□□□□ -0.26
CKLF-CMTM1-203ENST00000529718 NUP160Q12769 1436 aa13.41□□□□□ -0.26
CKLF-CMTM1-203ENST00000529718 TSPOAP1O95153 1857 aa13.41□□□□□ -0.26
CKLF-CMTM1-203ENST00000529718 KDM4FA0A1W2PPD8 638 aa13.4□□□□□ -0.26
CKLF-CMTM1-203ENST00000529718 DIP2BQ9P265 1576 aa13.38□□□□□ -0.27
CKLF-CMTM1-203ENST00000529718 KDM6BO15054 1643 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms