RNA–Protein interactions for RNA: ENST00000529328.1

LINC00958-204, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 580 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-204ENST00000529328 AEBP2Q6ZN18 517 aaPredicted RBP16.57■□□□□ 0.24
LINC00958-204ENST00000529328 CHIC1Q5VXU3 224 aa15.84■□□□□ 0.13
LINC00958-204ENST00000529328 NISCHQ9Y2I1 1504 aa15.58■□□□□ 0.09
LINC00958-204ENST00000529328 CCDC180Q9P1Z9 1646 aa14.18□□□□□ -0.14
LINC00958-204ENST00000529328 SENP3Q9H4L4 574 aaPredicted RBP14.05□□□□□ -0.16
LINC00958-204ENST00000529328 ABCC9O60706 1549 aa13.95□□□□□ -0.18
LINC00958-204ENST00000529328 PHF23Q9BUL5 403 aaPredicted RBP13.92□□□□□ -0.18
LINC00958-204ENST00000529328 RB1CC1Q8TDY2 1594 aa13.38□□□□□ -0.27
LINC00958-204ENST00000529328 NACADO15069 1562 aa13.28□□□□□ -0.28
LINC00958-204ENST00000529328 UNC13AQ9UPW8 1703 aa13.26□□□□□ -0.29
LINC00958-204ENST00000529328 FOXD1Q16676 465 aa13.11□□□□□ -0.31
LINC00958-204ENST00000529328 MYO15BQ96JP2 1530 aa13.11□□□□□ -0.31
LINC00958-204ENST00000529328 BICRAQ9NZM4 1560 aa13.01□□□□□ -0.33
LINC00958-204ENST00000529328 DNAJC5BQ9UF47 199 aa12.98□□□□□ -0.33
LINC00958-204ENST00000529328 ZCCHC6Q5VYS8 1495 aaKnown RBP12.97□□□□□ -0.33
LINC00958-204ENST00000529328 DCAF1Q9Y4B6 1507 aa12.93□□□□□ -0.34
LINC00958-204ENST00000529328 DCAF8L2P0C7V8 631 aa12.87□□□□□ -0.35
LINC00958-204ENST00000529328 SHROOM4Q9ULL8 1493 aa12.86□□□□□ -0.35
LINC00958-204ENST00000529328 PABPN1Q86U42 306 aaKnown RBP eCLIP12.84□□□□□ -0.35
LINC00958-204ENST00000529328 SCRIBQ14160 1630 aa12.8□□□□□ -0.36
LINC00958-204ENST00000529328 CC2D2AQ9P2K1 1620 aa12.71□□□□□ -0.37
LINC00958-204ENST00000529328 PLPPR3Q6T4P5 718 aa12.69□□□□□ -0.38
LINC00958-204ENST00000529328 EIF4G1Q04637 1599 aaKnown RBP12.67□□□□□ -0.38
LINC00958-204ENST00000529328 CECR2Q9BXF3 1484 aa12.58□□□□□ -0.4
LINC00958-204ENST00000529328 PPP6R1Q9UPN7 881 aa12.38□□□□□ -0.43
LINC00958-204ENST00000529328 ADRA2BP18089 450 aa12.34□□□□□ -0.43
LINC00958-204ENST00000529328 PIAS4Q8N2W9 510 aaPredicted RBP12.27□□□□□ -0.45
LINC00958-204ENST00000529328 SMARCA4P51532 1647 aa12.24□□□□□ -0.45
LINC00958-204ENST00000529328 HMGXB3Q12766 1538 aa12.21□□□□□ -0.46
LINC00958-204ENST00000529328 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
LINC00958-204ENST00000529328 NCAPD3P42695 1498 aa12.18□□□□□ -0.46
LINC00958-204ENST00000529328 MSH5O43196 834 aa12.17□□□□□ -0.46
LINC00958-204ENST00000529328 ATAD2BQ9ULI0 1458 aa12.15□□□□□ -0.46
LINC00958-204ENST00000529328 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
LINC00958-204ENST00000529328 BAZ1AQ9NRL2 1556 aaPredicted RBP12.13□□□□□ -0.47
LINC00958-204ENST00000529328 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
LINC00958-204ENST00000529328 CUX2O14529 1486 aa12.1□□□□□ -0.47
LINC00958-204ENST00000529328 ERCC6Q03468 1493 aa12.05□□□□□ -0.48
LINC00958-204ENST00000529328 BAZ1BQ9UIG0 1483 aaKnown RBP12.05□□□□□ -0.48
LINC00958-204ENST00000529328 THOC2Q8NI27 1593 aaKnown RBP12.04□□□□□ -0.48
LINC00958-204ENST00000529328 LAMC3Q9Y6N6 1575 aa12.01□□□□□ -0.49
LINC00958-204ENST00000529328 KIF21AQ7Z4S6 1674 aa12.01□□□□□ -0.49
LINC00958-204ENST00000529328 MROH2BQ7Z745 1585 aa12□□□□□ -0.49
LINC00958-204ENST00000529328 NESP48681 1621 aa12□□□□□ -0.49
LINC00958-204ENST00000529328 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
LINC00958-204ENST00000529328 WIZO95785 1651 aa11.92□□□□□ -0.5
LINC00958-204ENST00000529328 PRDM2Q13029 1718 aa11.86□□□□□ -0.51
LINC00958-204ENST00000529328 WDR62O43379 1518 aa11.81□□□□□ -0.52
LINC00958-204ENST00000529328 PDS5BQ9NTI5 1447 aa11.81□□□□□ -0.52
LINC00958-204ENST00000529328 MRC2Q9UBG0 1479 aa11.77□□□□□ -0.52
LINC00958-204ENST00000529328 TOP2AP11388 1531 aaKnown RBP11.76□□□□□ -0.53
LINC00958-204ENST00000529328 CADPSQ9ULU8 1353 aa11.76□□□□□ -0.53
LINC00958-204ENST00000529328 CEP164Q9UPV0 1460 aa11.73□□□□□ -0.53
LINC00958-204ENST00000529328 CFTRP13569 1480 aa11.69□□□□□ -0.54
LINC00958-204ENST00000529328 RSF1Q96T23 1441 aaPredicted RBP11.69□□□□□ -0.54
LINC00958-204ENST00000529328 FANCD2Q9BXW9 1451 aa11.68□□□□□ -0.54
LINC00958-204ENST00000529328 URB2Q14146 1524 aaKnown RBP11.61□□□□□ -0.55
LINC00958-204ENST00000529328 CCDC88BA6NC98 1476 aa11.53□□□□□ -0.56
LINC00958-204ENST00000529328 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
LINC00958-204ENST00000529328 DNMBPQ6XZF7 1577 aa11.5□□□□□ -0.57
LINC00958-204ENST00000529328 TOPBP1Q92547 1522 aa11.49□□□□□ -0.57
LINC00958-204ENST00000529328 CHD1O14646 1710 aa11.47□□□□□ -0.57
LINC00958-204ENST00000529328 IFT140Q96RY7 1462 aa11.47□□□□□ -0.57
LINC00958-204ENST00000529328 TARBP1Q13395 1621 aaKnown RBP11.46□□□□□ -0.57
LINC00958-204ENST00000529328 RIMBP3CA6NJZ7 1639 aa11.45□□□□□ -0.58
LINC00958-204ENST00000529328 RIMBP3BA6NNM3 1639 aa11.45□□□□□ -0.58
LINC00958-204ENST00000529328 RIMBP3Q9UFD9 1639 aa11.45□□□□□ -0.58
LINC00958-204ENST00000529328 ABCC8Q09428 1581 aa11.45□□□□□ -0.58
LINC00958-204ENST00000529328 ZNF608Q9ULD9 1512 aaPredicted RBP11.44□□□□□ -0.58
LINC00958-204ENST00000529328 WDR97A6NE52 1622 aa11.39□□□□□ -0.59
LINC00958-204ENST00000529328 OSCARQ8IYS5 282 aa11.36□□□□□ -0.59
LINC00958-204ENST00000529328 TRIM41Q8WV44 630 aa11.36□□□□□ -0.59
LINC00958-204ENST00000529328 POLA1P09884 1462 aaPredicted RBP11.36□□□□□ -0.59
LINC00958-204ENST00000529328 ARHGEF11O15085 1522 aa11.35□□□□□ -0.59
LINC00958-204ENST00000529328 PBRM1Q86U86 1689 aa11.34□□□□□ -0.59
LINC00958-204ENST00000529328 MAPK8IP2Q13387 824 aaPredicted RBP11.3□□□□□ -0.6
LINC00958-204ENST00000529328 CUX1P39880 1505 aa11.3□□□□□ -0.6
LINC00958-204ENST00000529328 AQRO60306 1485 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC00958-204ENST00000529328 FGD5Q6ZNL6 1462 aa11.28□□□□□ -0.6
LINC00958-204ENST00000529328 CLASP1Q7Z460 1538 aa11.27□□□□□ -0.61
LINC00958-204ENST00000529328 RAD54L2Q9Y4B4 1467 aa11.26□□□□□ -0.61
LINC00958-204ENST00000529328 ABCA5Q8WWZ7 1642 aa11.26□□□□□ -0.61
LINC00958-204ENST00000529328 SNAPC4Q5SXM2 1469 aa11.24□□□□□ -0.61
LINC00958-204ENST00000529328 MAGI1Q96QZ7 1491 aaPredicted RBP11.24□□□□□ -0.61
LINC00958-204ENST00000529328 SYNJ1O43426 1573 aa11.24□□□□□ -0.61
LINC00958-204ENST00000529328 ARAP1Q96P48 1450 aa11.23□□□□□ -0.61
LINC00958-204ENST00000529328 SOGA1O94964 1423 aa11.22□□□□□ -0.61
LINC00958-204ENST00000529328 BIVM-ERCC5R4GMW8 1640 aa11.22□□□□□ -0.61
LINC00958-204ENST00000529328 SCAF1Q9H7N4 1312 aaKnown RBP11.21□□□□□ -0.61
LINC00958-204ENST00000529328 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
LINC00958-204ENST00000529328 ABCA10Q8WWZ4 1543 aa11.18□□□□□ -0.62
LINC00958-204ENST00000529328 DMRT2Q9Y5R5 561 aa11.17□□□□□ -0.62
LINC00958-204ENST00000529328 SYNJ2O15056 1496 aa11.17□□□□□ -0.62
LINC00958-204ENST00000529328 TDRD9Q8NDG6 1382 aaKnown RBP11.16□□□□□ -0.62
LINC00958-204ENST00000529328 ADAMTS12P58397 1594 aa11.16□□□□□ -0.62
LINC00958-204ENST00000529328 PPP4R3CPQ6ZMV5 832 aa11.16□□□□□ -0.62
LINC00958-204ENST00000529328 TOP2BQ02880 1626 aa11.16□□□□□ -0.62
LINC00958-204ENST00000529328 GAPVD1Q14C86 1478 aa11.14□□□□□ -0.63
LINC00958-204ENST00000529328 SHROOM2Q13796 1616 aa11.09□□□□□ -0.63
LINC00958-204ENST00000529328 FBLN2P98095 1184 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms