RNA–Protein interactions for RNA: ENST00000529201.1

SNRNP35-205, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-205ENST00000529201 NISCHQ9Y2I1 1504 aa33.28■■■□□ 2.92
SNRNP35-205ENST00000529201 AEBP2Q6ZN18 517 aaPredicted RBP30.11■■■□□ 2.41
SNRNP35-205ENST00000529201 CCDC180Q9P1Z9 1646 aa29.8■■■□□ 2.36
SNRNP35-205ENST00000529201 ABCC9O60706 1549 aa29.38■■■□□ 2.29
SNRNP35-205ENST00000529201 CHIC1Q5VXU3 224 aa28.42■■■□□ 2.14
SNRNP35-205ENST00000529201 RB1CC1Q8TDY2 1594 aa28.21■■■□□ 2.11
SNRNP35-205ENST00000529201 NACADO15069 1562 aa28.11■■■□□ 2.09
SNRNP35-205ENST00000529201 DCAF8L2P0C7V8 631 aa27.89■■■□□ 2.06
SNRNP35-205ENST00000529201 MYO15BQ96JP2 1530 aa27.87■■■□□ 2.05
SNRNP35-205ENST00000529201 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.02
SNRNP35-205ENST00000529201 DCAF1Q9Y4B6 1507 aa27.59■■■□□ 2.01
SNRNP35-205ENST00000529201 UNC13AQ9UPW8 1703 aa27.51■■□□□ 1.99
SNRNP35-205ENST00000529201 PABPN1Q86U42 306 aaKnown RBP eCLIP27.37■■□□□ 1.97
SNRNP35-205ENST00000529201 BICRAQ9NZM4 1560 aa27.3■■□□□ 1.96
SNRNP35-205ENST00000529201 DNAJC5BQ9UF47 199 aa27.25■■□□□ 1.95
SNRNP35-205ENST00000529201 SHROOM4Q9ULL8 1493 aa27.12■■□□□ 1.93
SNRNP35-205ENST00000529201 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
SNRNP35-205ENST00000529201 EIF4G1Q04637 1599 aaKnown RBP26.63■■□□□ 1.85
SNRNP35-205ENST00000529201 CC2D2AQ9P2K1 1620 aa26.6■■□□□ 1.85
SNRNP35-205ENST00000529201 CECR2Q9BXF3 1484 aa26.48■■□□□ 1.83
SNRNP35-205ENST00000529201 NCAPD3P42695 1498 aa25.92■■□□□ 1.74
SNRNP35-205ENST00000529201 SMARCA4P51532 1647 aa25.89■■□□□ 1.74
SNRNP35-205ENST00000529201 BAZ1AQ9NRL2 1556 aaPredicted RBP25.86■■□□□ 1.73
SNRNP35-205ENST00000529201 SMARCA2P51531 1590 aa25.84■■□□□ 1.73
SNRNP35-205ENST00000529201 ATAD2BQ9ULI0 1458 aa25.84■■□□□ 1.73
SNRNP35-205ENST00000529201 HMGXB3Q12766 1538 aa25.76■■□□□ 1.71
SNRNP35-205ENST00000529201 PEG3Q9GZU2 1588 aa25.69■■□□□ 1.7
SNRNP35-205ENST00000529201 SENP3Q9H4L4 574 aaPredicted RBP25.69■■□□□ 1.7
SNRNP35-205ENST00000529201 BAZ1BQ9UIG0 1483 aaKnown RBP25.61■■□□□ 1.69
SNRNP35-205ENST00000529201 MROH2BQ7Z745 1585 aa25.6■■□□□ 1.69
SNRNP35-205ENST00000529201 ERCC6Q03468 1493 aa25.4■■□□□ 1.66
SNRNP35-205ENST00000529201 PHF23Q9BUL5 403 aaPredicted RBP25.38■■□□□ 1.65
SNRNP35-205ENST00000529201 CUX2O14529 1486 aa25.31■■□□□ 1.64
SNRNP35-205ENST00000529201 LAMC3Q9Y6N6 1575 aa25.31■■□□□ 1.64
SNRNP35-205ENST00000529201 WIZO95785 1651 aa25.3■■□□□ 1.64
SNRNP35-205ENST00000529201 NESP48681 1621 aa25.3■■□□□ 1.64
SNRNP35-205ENST00000529201 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.62
SNRNP35-205ENST00000529201 PDS5BQ9NTI5 1447 aa25.14■■□□□ 1.62
SNRNP35-205ENST00000529201 CADPSQ9ULU8 1353 aa25.13■■□□□ 1.61
SNRNP35-205ENST00000529201 TOP2AP11388 1531 aaKnown RBP25.07■■□□□ 1.6
SNRNP35-205ENST00000529201 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
SNRNP35-205ENST00000529201 KIF21AQ7Z4S6 1674 aa25.04■■□□□ 1.6
SNRNP35-205ENST00000529201 CFTRP13569 1480 aa24.91■■□□□ 1.58
SNRNP35-205ENST00000529201 DNAJC5Q9H3Z4 198 aa24.91■■□□□ 1.58
SNRNP35-205ENST00000529201 MRC2Q9UBG0 1479 aa24.87■■□□□ 1.57
SNRNP35-205ENST00000529201 CEP164Q9UPV0 1460 aa24.83■■□□□ 1.57
SNRNP35-205ENST00000529201 FANCD2Q9BXW9 1451 aa24.82■■□□□ 1.56
SNRNP35-205ENST00000529201 WDR62O43379 1518 aa24.8■■□□□ 1.56
SNRNP35-205ENST00000529201 CCDC88BA6NC98 1476 aa24.74■■□□□ 1.55
SNRNP35-205ENST00000529201 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
SNRNP35-205ENST00000529201 URB2Q14146 1524 aaKnown RBP24.56■■□□□ 1.52
SNRNP35-205ENST00000529201 ABCC8Q09428 1581 aa24.46■■□□□ 1.51
SNRNP35-205ENST00000529201 TOPBP1Q92547 1522 aa24.38■■□□□ 1.49
SNRNP35-205ENST00000529201 IFT140Q96RY7 1462 aa24.35■■□□□ 1.49
SNRNP35-205ENST00000529201 DNMBPQ6XZF7 1577 aa24.34■■□□□ 1.49
SNRNP35-205ENST00000529201 SUPT5HO00267 1087 aaKnown RBP24.25■■□□□ 1.47
SNRNP35-205ENST00000529201 OSCARQ8IYS5 282 aa24.19■■□□□ 1.46
SNRNP35-205ENST00000529201 ZNF608Q9ULD9 1512 aaPredicted RBP24.19■■□□□ 1.46
SNRNP35-205ENST00000529201 TARBP1Q13395 1621 aaKnown RBP24.15■■□□□ 1.46
SNRNP35-205ENST00000529201 POLA1P09884 1462 aaPredicted RBP24.14■■□□□ 1.46
SNRNP35-205ENST00000529201 EIF4G3O43432 1585 aaKnown RBP24.11■■□□□ 1.45
SNRNP35-205ENST00000529201 SOGA1O94964 1423 aa24.06■■□□□ 1.44
SNRNP35-205ENST00000529201 CUX1P39880 1505 aa24.04■■□□□ 1.44
SNRNP35-205ENST00000529201 WDR97A6NE52 1622 aa24.03■■□□□ 1.44
SNRNP35-205ENST00000529201 AQRO60306 1485 aaKnown RBP eCLIP24.02■■□□□ 1.44
SNRNP35-205ENST00000529201 FGD5Q6ZNL6 1462 aa24.02■■□□□ 1.44
SNRNP35-205ENST00000529201 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
SNRNP35-205ENST00000529201 FOXD1Q16676 465 aa23.99■■□□□ 1.43
SNRNP35-205ENST00000529201 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
SNRNP35-205ENST00000529201 CHD1O14646 1710 aa23.87■■□□□ 1.41
SNRNP35-205ENST00000529201 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
SNRNP35-205ENST00000529201 GRIN2BQ13224 1484 aa23.83■■□□□ 1.41
SNRNP35-205ENST00000529201 MAGI1Q96QZ7 1491 aaPredicted RBP23.82■■□□□ 1.4
SNRNP35-205ENST00000529201 ABCA10Q8WWZ4 1543 aa23.82■■□□□ 1.4
SNRNP35-205ENST00000529201 FBLN2P98095 1184 aa23.81■■□□□ 1.4
SNRNP35-205ENST00000529201 SNAPC4Q5SXM2 1469 aa23.8■■□□□ 1.4
SNRNP35-205ENST00000529201 WRNQ14191 1432 aaPredicted RBP eCLIP23.79■■□□□ 1.4
SNRNP35-205ENST00000529201 TOP2BQ02880 1626 aa23.79■■□□□ 1.4
SNRNP35-205ENST00000529201 BIVM-ERCC5R4GMW8 1640 aa23.79■■□□□ 1.4
SNRNP35-205ENST00000529201 RIMBP3CA6NJZ7 1639 aa23.78■■□□□ 1.4
SNRNP35-205ENST00000529201 RIMBP3BA6NNM3 1639 aa23.78■■□□□ 1.4
SNRNP35-205ENST00000529201 RIMBP3Q9UFD9 1639 aa23.78■■□□□ 1.4
SNRNP35-205ENST00000529201 GAPVD1Q14C86 1478 aa23.77■■□□□ 1.4
SNRNP35-205ENST00000529201 ARHGEF11O15085 1522 aa23.75■■□□□ 1.39
SNRNP35-205ENST00000529201 PBRM1Q86U86 1689 aa23.74■■□□□ 1.39
SNRNP35-205ENST00000529201 ABCA5Q8WWZ7 1642 aa23.73■■□□□ 1.39
SNRNP35-205ENST00000529201 CHMP7Q8WUX9 453 aaPredicted RBP23.73■■□□□ 1.39
SNRNP35-205ENST00000529201 SYNJ2O15056 1496 aa23.72■■□□□ 1.39
SNRNP35-205ENST00000529201 SYNJ1O43426 1573 aa23.7■■□□□ 1.38
SNRNP35-205ENST00000529201 CLASP1Q7Z460 1538 aa23.62■■□□□ 1.37
SNRNP35-205ENST00000529201 ERICH3Q5RHP9 1530 aa23.54■■□□□ 1.36
SNRNP35-205ENST00000529201 CYB5RLQ6IPT4 315 aa23.53■■□□□ 1.36
SNRNP35-205ENST00000529201 ADAMTS12P58397 1594 aa23.52■■□□□ 1.36
SNRNP35-205ENST00000529201 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
SNRNP35-205ENST00000529201 GRIN2AQ12879 1464 aa23.5■■□□□ 1.35
SNRNP35-205ENST00000529201 ARAP1Q96P48 1450 aa23.5■■□□□ 1.35
SNRNP35-205ENST00000529201 NUP160Q12769 1436 aa23.42■■□□□ 1.34
SNRNP35-205ENST00000529201 CEP170Q5SW79 1584 aa23.38■■□□□ 1.33
SNRNP35-205ENST00000529201 KIF27Q86VH2 1401 aa23.34■■□□□ 1.33
SNRNP35-205ENST00000529201 SHROOM2Q13796 1616 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms