RNA–Protein interactions for RNA: ENST00000528386.3

NANOGP8-201, Transcript of Nanog homeobox retrogene P8, humanhuman

APPRIS P1 BASIC

Gene NANOGP8, Length 918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP8-201ENST00000528386 NISCHQ9Y2I1 1504 aa22.76■■□□□ 1.23
NANOGP8-201ENST00000528386 CCDC180Q9P1Z9 1646 aa19.86■□□□□ 0.77
NANOGP8-201ENST00000528386 AEBP2Q6ZN18 517 aaPredicted RBP19.63■□□□□ 0.73
NANOGP8-201ENST00000528386 ZCCHC6Q5VYS8 1495 aaKnown RBP19.21■□□□□ 0.67
NANOGP8-201ENST00000528386 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
NANOGP8-201ENST00000528386 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
NANOGP8-201ENST00000528386 MYO15BQ96JP2 1530 aa18.6■□□□□ 0.57
NANOGP8-201ENST00000528386 SHROOM4Q9ULL8 1493 aa18.58■□□□□ 0.56
NANOGP8-201ENST00000528386 DCAF8L2P0C7V8 631 aa18.51■□□□□ 0.55
NANOGP8-201ENST00000528386 ABCC9O60706 1549 aa18.39■□□□□ 0.53
NANOGP8-201ENST00000528386 NACADO15069 1562 aa18.38■□□□□ 0.53
NANOGP8-201ENST00000528386 SCRIBQ14160 1630 aa18.17■□□□□ 0.5
NANOGP8-201ENST00000528386 RB1CC1Q8TDY2 1594 aa18.17■□□□□ 0.5
NANOGP8-201ENST00000528386 SUPT5HO00267 1087 aaKnown RBP17.97■□□□□ 0.47
NANOGP8-201ENST00000528386 UNC13AQ9UPW8 1703 aa17.78■□□□□ 0.44
NANOGP8-201ENST00000528386 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
NANOGP8-201ENST00000528386 BAZ1AQ9NRL2 1556 aaPredicted RBP17.6■□□□□ 0.41
NANOGP8-201ENST00000528386 CECR2Q9BXF3 1484 aa17.59■□□□□ 0.41
NANOGP8-201ENST00000528386 BICRAQ9NZM4 1560 aa17.57■□□□□ 0.4
NANOGP8-201ENST00000528386 MROH2BQ7Z745 1585 aa17.55■□□□□ 0.4
NANOGP8-201ENST00000528386 SMARCA4P51532 1647 aa17.48■□□□□ 0.39
NANOGP8-201ENST00000528386 WIZO95785 1651 aa17.43■□□□□ 0.38
NANOGP8-201ENST00000528386 TOP2AP11388 1531 aaKnown RBP17.34■□□□□ 0.37
NANOGP8-201ENST00000528386 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
NANOGP8-201ENST00000528386 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
NANOGP8-201ENST00000528386 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
NANOGP8-201ENST00000528386 EIF4G1Q04637 1599 aaKnown RBP17.15■□□□□ 0.34
NANOGP8-201ENST00000528386 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
NANOGP8-201ENST00000528386 CCDC88BA6NC98 1476 aa17.07■□□□□ 0.32
NANOGP8-201ENST00000528386 BAZ1BQ9UIG0 1483 aaKnown RBP17.03■□□□□ 0.32
NANOGP8-201ENST00000528386 HMGXB3Q12766 1538 aa16.98■□□□□ 0.31
NANOGP8-201ENST00000528386 TRIM41Q8WV44 630 aa16.93■□□□□ 0.3
NANOGP8-201ENST00000528386 NCAPD3P42695 1498 aa16.92■□□□□ 0.3
NANOGP8-201ENST00000528386 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
NANOGP8-201ENST00000528386 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
NANOGP8-201ENST00000528386 CC2D2AQ9P2K1 1620 aa16.7■□□□□ 0.26
NANOGP8-201ENST00000528386 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
NANOGP8-201ENST00000528386 SENP3Q9H4L4 574 aaPredicted RBP16.67■□□□□ 0.26
NANOGP8-201ENST00000528386 PRDM2Q13029 1718 aa16.65■□□□□ 0.26
NANOGP8-201ENST00000528386 EEA1Q15075 1411 aa16.64■□□□□ 0.25
NANOGP8-201ENST00000528386 LOC105371045A0A1W2PR82 267 aa16.63■□□□□ 0.25
NANOGP8-201ENST00000528386 SYNJ1O43426 1573 aa16.61■□□□□ 0.25
NANOGP8-201ENST00000528386 CFTRP13569 1480 aa16.6■□□□□ 0.25
NANOGP8-201ENST00000528386 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.24
NANOGP8-201ENST00000528386 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
NANOGP8-201ENST00000528386 FAM9AQ8IZU1 332 aaPredicted RBP16.56■□□□□ 0.24
NANOGP8-201ENST00000528386 SOGA1O94964 1423 aa16.48■□□□□ 0.23
NANOGP8-201ENST00000528386 CADPSQ9ULU8 1353 aa16.47■□□□□ 0.23
NANOGP8-201ENST00000528386 CUX1P39880 1505 aa16.42■□□□□ 0.22
NANOGP8-201ENST00000528386 KIF21BO75037 1637 aa16.41■□□□□ 0.22
NANOGP8-201ENST00000528386 CSRNP3Q8WYN3 585 aa16.39■□□□□ 0.21
NANOGP8-201ENST00000528386 GOLGA3Q08378 1498 aa16.39■□□□□ 0.21
NANOGP8-201ENST00000528386 RUSC2Q8N2Y8 1516 aa16.39■□□□□ 0.21
NANOGP8-201ENST00000528386 CEP164Q9UPV0 1460 aa16.36■□□□□ 0.21
NANOGP8-201ENST00000528386 LAMC3Q9Y6N6 1575 aa16.35■□□□□ 0.21
NANOGP8-201ENST00000528386 TNIKQ9UKE5 1360 aa16.35■□□□□ 0.21
NANOGP8-201ENST00000528386 FANCD2Q9BXW9 1451 aa16.3■□□□□ 0.2
NANOGP8-201ENST00000528386 CEP162Q5TB80 1403 aa16.27■□□□□ 0.19
NANOGP8-201ENST00000528386 DNMBPQ6XZF7 1577 aa16.26■□□□□ 0.19
NANOGP8-201ENST00000528386 ERICH3Q5RHP9 1530 aa16.26■□□□□ 0.19
NANOGP8-201ENST00000528386 EHMT2Q96KQ7 1210 aa16.25■□□□□ 0.19
NANOGP8-201ENST00000528386 KIF27Q86VH2 1401 aa16.25■□□□□ 0.19
NANOGP8-201ENST00000528386 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
NANOGP8-201ENST00000528386 NESP48681 1621 aa16.2■□□□□ 0.18
NANOGP8-201ENST00000528386 PRXQ9BXM0 1461 aa16.2■□□□□ 0.18
NANOGP8-201ENST00000528386 RAPGEF2Q9Y4G8 1499 aa16.17■□□□□ 0.18
NANOGP8-201ENST00000528386 UBTFP17480 764 aaKnown RBP16.17■□□□□ 0.18
NANOGP8-201ENST00000528386 TRIM26Q12899 539 aaPredicted RBP16.17■□□□□ 0.18
NANOGP8-201ENST00000528386 TOPBP1Q92547 1522 aa16.17■□□□□ 0.18
NANOGP8-201ENST00000528386 PDS5BQ9NTI5 1447 aa16.17■□□□□ 0.18
NANOGP8-201ENST00000528386 PCGF6Q9BYE7 350 aa16.14■□□□□ 0.17
NANOGP8-201ENST00000528386 CUX2O14529 1486 aa16.14■□□□□ 0.17
NANOGP8-201ENST00000528386 ABCA10Q8WWZ4 1543 aa16.1■□□□□ 0.17
NANOGP8-201ENST00000528386 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
NANOGP8-201ENST00000528386 KIF21AQ7Z4S6 1674 aa16.09■□□□□ 0.17
NANOGP8-201ENST00000528386 CLIP1P30622 1438 aa16.09■□□□□ 0.17
NANOGP8-201ENST00000528386 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
NANOGP8-201ENST00000528386 WDR97A6NE52 1622 aa16.08■□□□□ 0.17
NANOGP8-201ENST00000528386 CUL7Q14999 1698 aa16.02■□□□□ 0.16
NANOGP8-201ENST00000528386 IGF1RP08069 1367 aa16.01■□□□□ 0.15
NANOGP8-201ENST00000528386 VPS8Q8N3P4 1428 aa16.01■□□□□ 0.15
NANOGP8-201ENST00000528386 RAD54L2Q9Y4B4 1467 aa15.99■□□□□ 0.15
NANOGP8-201ENST00000528386 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
NANOGP8-201ENST00000528386 ABCA5Q8WWZ7 1642 aa15.98■□□□□ 0.15
NANOGP8-201ENST00000528386 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
NANOGP8-201ENST00000528386 CARMIL1Q5VZK9 1371 aa15.96■□□□□ 0.15
NANOGP8-201ENST00000528386 HRCP23327 699 aa15.94■□□□□ 0.14
NANOGP8-201ENST00000528386 TARBP1Q13395 1621 aaKnown RBP15.92■□□□□ 0.14
NANOGP8-201ENST00000528386 ARAP1Q96P48 1450 aa15.91■□□□□ 0.14
NANOGP8-201ENST00000528386 WDR62O43379 1518 aa15.89■□□□□ 0.13
NANOGP8-201ENST00000528386 CTTNBP2Q8WZ74 1663 aa15.87■□□□□ 0.13
NANOGP8-201ENST00000528386 GAPVD1Q14C86 1478 aa15.87■□□□□ 0.13
NANOGP8-201ENST00000528386 ARHGAP35Q9NRY4 1499 aa15.85■□□□□ 0.13
NANOGP8-201ENST00000528386 PBRM1Q86U86 1689 aa15.83■□□□□ 0.13
NANOGP8-201ENST00000528386 EFCAB5A4FU69 1503 aa15.83■□□□□ 0.12
NANOGP8-201ENST00000528386 IFT140Q96RY7 1462 aa15.82■□□□□ 0.12
NANOGP8-201ENST00000528386 THOC2Q8NI27 1593 aaKnown RBP15.8■□□□□ 0.12
NANOGP8-201ENST00000528386 APLP2Q06481 763 aa15.79■□□□□ 0.12
NANOGP8-201ENST00000528386 PPARGC1BQ86YN6 1023 aaKnown RBP15.79■□□□□ 0.12
NANOGP8-201ENST00000528386 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms