RNA–Protein interactions for RNA: ENST00000528319.1

AP003400.1-201, humanhuman

TSL 5 BASIC

Gene AP003400.1, Length 231 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003400.1-201ENST00000528319 NISCHQ9Y2I1 1504 aa11.55□□□□□ -0.56
AP003400.1-201ENST00000528319 CHIC1Q5VXU3 224 aa11.38□□□□□ -0.59
AP003400.1-201ENST00000528319 AEBP2Q6ZN18 517 aaPredicted RBP11.26□□□□□ -0.61
AP003400.1-201ENST00000528319 ABCC9O60706 1549 aa10.9□□□□□ -0.66
AP003400.1-201ENST00000528319 CCDC180Q9P1Z9 1646 aa10.65□□□□□ -0.7
AP003400.1-201ENST00000528319 DNAJC5BQ9UF47 199 aa10.59□□□□□ -0.71
AP003400.1-201ENST00000528319 RB1CC1Q8TDY2 1594 aa10.27□□□□□ -0.76
AP003400.1-201ENST00000528319 UNC13AQ9UPW8 1703 aa10.19□□□□□ -0.78
AP003400.1-201ENST00000528319 NACADO15069 1562 aa10.11□□□□□ -0.79
AP003400.1-201ENST00000528319 PHF23Q9BUL5 403 aaPredicted RBP10.09□□□□□ -0.79
AP003400.1-201ENST00000528319 DNAJC5Q9H3Z4 198 aa10.07□□□□□ -0.8
AP003400.1-201ENST00000528319 PABPN1Q86U42 306 aaKnown RBP eCLIP10.03□□□□□ -0.8
AP003400.1-201ENST00000528319 BICRAQ9NZM4 1560 aa10.01□□□□□ -0.81
AP003400.1-201ENST00000528319 CC2D2AQ9P2K1 1620 aa9.91□□□□□ -0.82
AP003400.1-201ENST00000528319 CECR2Q9BXF3 1484 aa9.88□□□□□ -0.83
AP003400.1-201ENST00000528319 MYO15BQ96JP2 1530 aa9.85□□□□□ -0.83
AP003400.1-201ENST00000528319 SHROOM4Q9ULL8 1493 aa9.84□□□□□ -0.83
AP003400.1-201ENST00000528319 EIF4G1Q04637 1599 aaKnown RBP9.78□□□□□ -0.84
AP003400.1-201ENST00000528319 DCAF8L2P0C7V8 631 aa9.77□□□□□ -0.85
AP003400.1-201ENST00000528319 CUX2O14529 1486 aa9.63□□□□□ -0.87
AP003400.1-201ENST00000528319 SCRIBQ14160 1630 aa9.57□□□□□ -0.88
AP003400.1-201ENST00000528319 DCAF1Q9Y4B6 1507 aa9.56□□□□□ -0.88
AP003400.1-201ENST00000528319 ZCCHC6Q5VYS8 1495 aaKnown RBP9.48□□□□□ -0.89
AP003400.1-201ENST00000528319 ERCC6Q03468 1493 aa9.44□□□□□ -0.9
AP003400.1-201ENST00000528319 PLPPR3Q6T4P5 718 aa9.42□□□□□ -0.9
AP003400.1-201ENST00000528319 SENP3Q9H4L4 574 aaPredicted RBP9.42□□□□□ -0.9
AP003400.1-201ENST00000528319 TRIM41Q8WV44 630 aa9.37□□□□□ -0.91
AP003400.1-201ENST00000528319 THOC2Q8NI27 1593 aaKnown RBP9.33□□□□□ -0.92
AP003400.1-201ENST00000528319 NCAPD3P42695 1498 aa9.3□□□□□ -0.92
AP003400.1-201ENST00000528319 NESP48681 1621 aa9.27□□□□□ -0.93
AP003400.1-201ENST00000528319 KIF21AQ7Z4S6 1674 aa9.24□□□□□ -0.93
AP003400.1-201ENST00000528319 HMGXB3Q12766 1538 aa9.22□□□□□ -0.93
AP003400.1-201ENST00000528319 ATAD2BQ9ULI0 1458 aa9.2□□□□□ -0.94
AP003400.1-201ENST00000528319 LAMC3Q9Y6N6 1575 aa9.2□□□□□ -0.94
AP003400.1-201ENST00000528319 SMARCA2P51531 1590 aa9.18□□□□□ -0.94
AP003400.1-201ENST00000528319 BAZ1AQ9NRL2 1556 aaPredicted RBP9.16□□□□□ -0.94
AP003400.1-201ENST00000528319 SMARCA4P51532 1647 aa9.13□□□□□ -0.95
AP003400.1-201ENST00000528319 PDS5BQ9NTI5 1447 aa9.09□□□□□ -0.95
AP003400.1-201ENST00000528319 WDR62O43379 1518 aa9.09□□□□□ -0.95
AP003400.1-201ENST00000528319 BAZ1BQ9UIG0 1483 aaKnown RBP9.08□□□□□ -0.96
AP003400.1-201ENST00000528319 PEG3Q9GZU2 1588 aa9.07□□□□□ -0.96
AP003400.1-201ENST00000528319 RIMBP3CA6NJZ7 1639 aa9.07□□□□□ -0.96
AP003400.1-201ENST00000528319 RIMBP3BA6NNM3 1639 aa9.07□□□□□ -0.96
AP003400.1-201ENST00000528319 RIMBP3Q9UFD9 1639 aa9.07□□□□□ -0.96
AP003400.1-201ENST00000528319 MRC2Q9UBG0 1479 aa9.05□□□□□ -0.96
AP003400.1-201ENST00000528319 OSCARQ8IYS5 282 aa9.05□□□□□ -0.96
AP003400.1-201ENST00000528319 ARHGEF11O15085 1522 aa8.96□□□□□ -0.97
AP003400.1-201ENST00000528319 CADPSQ9ULU8 1353 aa8.96□□□□□ -0.98
AP003400.1-201ENST00000528319 CEP164Q9UPV0 1460 aa8.93□□□□□ -0.98
AP003400.1-201ENST00000528319 ADRA2BP18089 450 aa8.89□□□□□ -0.99
AP003400.1-201ENST00000528319 MROH2BQ7Z745 1585 aa8.87□□□□□ -0.99
AP003400.1-201ENST00000528319 FANCD2Q9BXW9 1451 aa8.87□□□□□ -0.99
AP003400.1-201ENST00000528319 PRDM2Q13029 1718 aa8.86□□□□□ -0.99
AP003400.1-201ENST00000528319 TRHP20396 242 aaPredicted RBP8.86□□□□□ -0.99
AP003400.1-201ENST00000528319 CHD1O14646 1710 aa8.85□□□□□ -0.99
AP003400.1-201ENST00000528319 CYB5RLQ6IPT4 315 aa8.84□□□□□ -0.99
AP003400.1-201ENST00000528319 URB2Q14146 1524 aaKnown RBP8.84□□□□□ -0.99
AP003400.1-201ENST00000528319 ARAP1Q96P48 1450 aa8.83□□□□□ -1
AP003400.1-201ENST00000528319 CFTRP13569 1480 aa8.8□□□□□ -1
AP003400.1-201ENST00000528319 WIZO95785 1651 aa8.79□□□□□ -1
AP003400.1-201ENST00000528319 ZNF608Q9ULD9 1512 aaPredicted RBP8.78□□□□□ -1
AP003400.1-201ENST00000528319 PPP6R1Q9UPN7 881 aa8.77□□□□□ -1.01
AP003400.1-201ENST00000528319 RSF1Q96T23 1441 aaPredicted RBP8.77□□□□□ -1.01
AP003400.1-201ENST00000528319 EIF4G3O43432 1585 aaKnown RBP8.77□□□□□ -1.01
AP003400.1-201ENST00000528319 IFT140Q96RY7 1462 aa8.77□□□□□ -1.01
AP003400.1-201ENST00000528319 KCNA4P22459 653 aa8.75□□□□□ -1.01
AP003400.1-201ENST00000528319 EHMT2Q96KQ7 1210 aa8.73□□□□□ -1.01
AP003400.1-201ENST00000528319 FOXD1Q16676 465 aa8.72□□□□□ -1.01
AP003400.1-201ENST00000528319 TARBP1Q13395 1621 aaKnown RBP8.69□□□□□ -1.02
AP003400.1-201ENST00000528319 TOPBP1Q92547 1522 aa8.68□□□□□ -1.02
AP003400.1-201ENST00000528319 CLASP1Q7Z460 1538 aa8.67□□□□□ -1.02
AP003400.1-201ENST00000528319 ABCC8Q09428 1581 aa8.65□□□□□ -1.03
AP003400.1-201ENST00000528319 KIF13AQ9H1H9 1805 aa8.64□□□□□ -1.03
AP003400.1-201ENST00000528319 ILDR1Q86SU0 546 aaPredicted RBP8.63□□□□□ -1.03
AP003400.1-201ENST00000528319 DNMBPQ6XZF7 1577 aa8.63□□□□□ -1.03
AP003400.1-201ENST00000528319 TOP2AP11388 1531 aaKnown RBP8.63□□□□□ -1.03
AP003400.1-201ENST00000528319 AQRO60306 1485 aaKnown RBP eCLIP8.63□□□□□ -1.03
AP003400.1-201ENST00000528319 SYNJ1O43426 1573 aa8.61□□□□□ -1.03
AP003400.1-201ENST00000528319 WDR97A6NE52 1622 aa8.59□□□□□ -1.03
AP003400.1-201ENST00000528319 FBLN2P98095 1184 aa8.59□□□□□ -1.03
AP003400.1-201ENST00000528319 GAPVD1Q14C86 1478 aa8.56□□□□□ -1.04
AP003400.1-201ENST00000528319 POLA1P09884 1462 aaPredicted RBP8.55□□□□□ -1.04
AP003400.1-201ENST00000528319 SNAPC4Q5SXM2 1469 aa8.55□□□□□ -1.04
AP003400.1-201ENST00000528319 MAGI1Q96QZ7 1491 aaPredicted RBP8.54□□□□□ -1.04
AP003400.1-201ENST00000528319 PBRM1Q86U86 1689 aa8.52□□□□□ -1.05
AP003400.1-201ENST00000528319 SYNJ2O15056 1496 aa8.51□□□□□ -1.05
AP003400.1-201ENST00000528319 CCDC88BA6NC98 1476 aa8.5□□□□□ -1.05
AP003400.1-201ENST00000528319 RAD54L2Q9Y4B4 1467 aa8.5□□□□□ -1.05
AP003400.1-201ENST00000528319 CHMP7Q8WUX9 453 aaPredicted RBP8.49□□□□□ -1.05
AP003400.1-201ENST00000528319 TDRD9Q8NDG6 1382 aaKnown RBP8.48□□□□□ -1.05
AP003400.1-201ENST00000528319 ERCC6L2Q5T890 1561 aa8.48□□□□□ -1.05
AP003400.1-201ENST00000528319 GRIN2BQ13224 1484 aa8.47□□□□□ -1.05
AP003400.1-201ENST00000528319 KDM4FA0A1W2PPD8 638 aa8.47□□□□□ -1.05
AP003400.1-201ENST00000528319 SOGA1O94964 1423 aa8.46□□□□□ -1.05
AP003400.1-201ENST00000528319 SHROOM2Q13796 1616 aa8.44□□□□□ -1.06
AP003400.1-201ENST00000528319 TSPOAP1O95153 1857 aa8.44□□□□□ -1.06
AP003400.1-201ENST00000528319 CEP170Q5SW79 1584 aa8.44□□□□□ -1.06
AP003400.1-201ENST00000528319 FGD5Q6ZNL6 1462 aa8.43□□□□□ -1.06
AP003400.1-201ENST00000528319 KDM6BO15054 1643 aa8.43□□□□□ -1.06
AP003400.1-201ENST00000528319 ABCA5Q8WWZ7 1642 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms